RNA–Protein interactions for RNA: ENST00000519503.5

CHMP7-205, Transcript of charged multivesicular body protein 7, humanhuman

TSL 2

Gene CHMP7, Length 917 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP7-205ENST00000519503 VWCEQ96DN2 955 aa25.02■■□□□ 1.6
CHMP7-205ENST00000519503 CHD7Q9P2D1 2997 aa25.02■■□□□ 1.6
CHMP7-205ENST00000519503 ZBBXA8MT70 800 aa25.01■■□□□ 1.59
CHMP7-205ENST00000519503 GGPS1O95749 300 aa25.01■■□□□ 1.59
CHMP7-205ENST00000519503 UBA1P22314 1058 aaKnown RBP25.01■■□□□ 1.59
CHMP7-205ENST00000519503 PSEN2P49810 448 aa25.01■■□□□ 1.59
CHMP7-205ENST00000519503 GDF6Q6KF10 455 aaPredicted RBP25.01■■□□□ 1.59
CHMP7-205ENST00000519503 AFAP1L1Q8TED9 768 aa25.01■■□□□ 1.59
CHMP7-205ENST00000519503 SPATA33Q96N06 139 aa25.01■■□□□ 1.59
CHMP7-205ENST00000519503 GTF2IRD1Q9UHL9 959 aa25.01■■□□□ 1.59
CHMP7-205ENST00000519503 SLC12A7Q9Y666 1083 aa25.01■■□□□ 1.59
CHMP7-205ENST00000519503 PIK3CDO00329 1044 aa25■■□□□ 1.59
CHMP7-205ENST00000519503 ZNF286BP0CG31 522 aa25■■□□□ 1.59
CHMP7-205ENST00000519503 MFSD10Q14728 455 aa25■■□□□ 1.59
CHMP7-205ENST00000519503 HAS3O00219 553 aa24.99■■□□□ 1.59
CHMP7-205ENST00000519503 PARNO95453 639 aaKnown RBP24.99■■□□□ 1.59
CHMP7-205ENST00000519503 ATP2A2P16615 1042 aaKnown RBP24.99■■□□□ 1.59
CHMP7-205ENST00000519503 MYO9BQ13459 2157 aa24.99■■□□□ 1.59
CHMP7-205ENST00000519503 KIAA0753Q2KHM9 967 aa24.99■■□□□ 1.59
CHMP7-205ENST00000519503 HSDL1Q3SXM5 330 aa24.99■■□□□ 1.59
CHMP7-205ENST00000519503 XRRA1Q6P2D8 792 aa24.99■■□□□ 1.59
CHMP7-205ENST00000519503 SRBD1Q8N5C6 995 aaKnown RBP24.99■■□□□ 1.59
CHMP7-205ENST00000519503 SMARCC2Q8TAQ2 1214 aa24.99■■□□□ 1.59
CHMP7-205ENST00000519503 INPP4AQ96PE3 977 aaPredicted RBP24.99■■□□□ 1.59
CHMP7-205ENST00000519503 MLXIPQ9HAP2 919 aa24.99■■□□□ 1.59
CHMP7-205ENST00000519503 SLC28A3Q9HAS3 691 aa24.99■■□□□ 1.59
CHMP7-205ENST00000519503 TRANK1O15050 2925 aa24.98■■□□□ 1.59
CHMP7-205ENST00000519503 PLEKHA8P1O95397 391 aa24.98■■□□□ 1.59
CHMP7-205ENST00000519503 SP2Q02086 613 aa24.98■■□□□ 1.59
CHMP7-205ENST00000519503 RBL2Q08999 1139 aa24.98■■□□□ 1.59
CHMP7-205ENST00000519503 SGMS1Q86VZ5 419 aa24.98■■□□□ 1.59
CHMP7-205ENST00000519503 CTAGE1Q96RT6 745 aa24.98■■□□□ 1.59
CHMP7-205ENST00000519503 GAS2L1Q99501 681 aaPredicted RBP24.98■■□□□ 1.59
CHMP7-205ENST00000519503 ALG1Q9BT22 464 aa24.98■■□□□ 1.59
CHMP7-205ENST00000519503 HDAC6Q9UBN7 1215 aa24.98■■□□□ 1.59
CHMP7-205ENST00000519503 PCDHA11Q9Y5I1 949 aa24.98■■□□□ 1.59
CHMP7-205ENST00000519503 ICAM3P32942 547 aa24.97■■□□□ 1.59
CHMP7-205ENST00000519503 MRPS9P82933 396 aaKnown RBP24.97■■□□□ 1.59
CHMP7-205ENST00000519503 FANCBQ8NB91 859 aa24.97■■□□□ 1.59
CHMP7-205ENST00000519503 SLC9A7Q96T83 725 aa24.97■■□□□ 1.59
CHMP7-205ENST00000519503 FTOQ9C0B1 505 aaKnown RBP eCLIP24.97■■□□□ 1.59
CHMP7-205ENST00000519503 TET1Q8NFU7 2136 aa24.97■■□□□ 1.59
CHMP7-205ENST00000519503 DOCK5Q9H7D0 1870 aa24.96■■□□□ 1.59
CHMP7-205ENST00000519503 FIBPO43427 364 aa24.96■■□□□ 1.59
CHMP7-205ENST00000519503 CDC45O75419 566 aa24.96■■□□□ 1.59
CHMP7-205ENST00000519503 BAIAP3O94812 1187 aa24.96■■□□□ 1.59
CHMP7-205ENST00000519503 SELPP16109 830 aa24.96■■□□□ 1.59
CHMP7-205ENST00000519503 NEDD9Q14511 834 aa24.96■■□□□ 1.59
CHMP7-205ENST00000519503 PCNX4Q63HM2 1172 aa24.96■■□□□ 1.59
CHMP7-205ENST00000519503 SYNE3Q6ZMZ3 975 aa24.96■■□□□ 1.59
CHMP7-205ENST00000519503 NKX2-4Q9H2Z4 354 aa24.96■■□□□ 1.59
CHMP7-205ENST00000519503 YBX2Q9Y2T7 364 aaKnown RBP24.96■■□□□ 1.59
CHMP7-205ENST00000519503 VCANP13611 3396 aa24.95■■□□□ 1.58
CHMP7-205ENST00000519503 SPATA31C2B4DYI2 1134 aa24.95■■□□□ 1.58
CHMP7-205ENST00000519503 NOP56O00567 594 aaKnown RBP24.95■■□□□ 1.58
CHMP7-205ENST00000519503 MEIS2O14770 477 aa24.95■■□□□ 1.58
CHMP7-205ENST00000519503 SORBS3O60504 671 aa24.95■■□□□ 1.58
CHMP7-205ENST00000519503 RXRAP19793 462 aa24.95■■□□□ 1.58
CHMP7-205ENST00000519503 PTK7Q13308 1070 aa24.95■■□□□ 1.58
CHMP7-205ENST00000519503 COL9A3Q14050 684 aaPredicted RBP24.95■■□□□ 1.58
CHMP7-205ENST00000519503 USP17L6PQ6QN14 398 aa24.95■■□□□ 1.58
CHMP7-205ENST00000519503 METTL7BQ6UX53 244 aa24.95■■□□□ 1.58
CHMP7-205ENST00000519503 TMTC3Q6ZXV5 915 aa24.95■■□□□ 1.58
CHMP7-205ENST00000519503 LRRC8DQ7L1W4 858 aa24.95■■□□□ 1.58
CHMP7-205ENST00000519503 PHOSPHO2Q8TCD6 241 aa24.95■■□□□ 1.58
CHMP7-205ENST00000519503 GPKOWQ92917 476 aaPredicted RBP eCLIP24.95■■□□□ 1.58
CHMP7-205ENST00000519503 ZFP91Q96JP5 570 aaPredicted RBP24.95■■□□□ 1.58
CHMP7-205ENST00000519503 NEK1Q96PY6 1258 aa24.95■■□□□ 1.58
CHMP7-205ENST00000519503 LRRC2Q9BYS8 371 aa24.95■■□□□ 1.58
CHMP7-205ENST00000519503 PSTPIP2Q9H939 334 aa24.95■■□□□ 1.58
CHMP7-205ENST00000519503 KRT32Q14532 448 aa24.94■■□□□ 1.58
CHMP7-205ENST00000519503 SKAP1Q86WV1 359 aa24.94■■□□□ 1.58
CHMP7-205ENST00000519503 MICU3Q86XE3 530 aa24.94■■□□□ 1.58
CHMP7-205ENST00000519503 CMTR1Q8N1G2 835 aaKnown RBP24.94■■□□□ 1.58
CHMP7-205ENST00000519503 DHX38Q92620 1227 aaKnown RBP24.94■■□□□ 1.58
CHMP7-205ENST00000519503 C16orf70Q9BSU1 422 aa24.94■■□□□ 1.58
CHMP7-205ENST00000519503 PRDM12Q9H4Q4 367 aa24.94■■□□□ 1.58
CHMP7-205ENST00000519503 CKBP12277 381 aa24.93■■□□□ 1.58
CHMP7-205ENST00000519503 RABGGTBP53611 331 aa24.93■■□□□ 1.58
CHMP7-205ENST00000519503 TSGA10IPQ3SY00 556 aa24.93■■□□□ 1.58
CHMP7-205ENST00000519503 PPP2R2DQ66LE6 453 aa24.93■■□□□ 1.58
CHMP7-205ENST00000519503 RBM28Q9NW13 759 aaKnown RBP24.93■■□□□ 1.58
CHMP7-205ENST00000519503 H3BRB1 525 aa24.92■■□□□ 1.58
CHMP7-205ENST00000519503 APOA5Q6Q788 366 aa24.92■■□□□ 1.58
CHMP7-205ENST00000519503 NLRX1Q86UT6 975 aa24.92■■□□□ 1.58
CHMP7-205ENST00000519503 GIMAP8Q8ND71 665 aaPredicted RBP24.92■■□□□ 1.58
CHMP7-205ENST00000519503 CDHR1Q96JP9 859 aa24.92■■□□□ 1.58
CHMP7-205ENST00000519503 SENP7Q9BQF6 1050 aa24.92■■□□□ 1.58
CHMP7-205ENST00000519503 USP26Q9BXU7 913 aa24.92■■□□□ 1.58
CHMP7-205ENST00000519503 TUT1Q9H6E5 874 aaKnown RBP24.92■■□□□ 1.58
CHMP7-205ENST00000519503 RTEL1Q9NZ71 1219 aa24.92■■□□□ 1.58
CHMP7-205ENST00000519503 LGALS2P05162 132 aa24.91■■□□□ 1.58
CHMP7-205ENST00000519503 SEMA3FQ13275 785 aa24.91■■□□□ 1.58
CHMP7-205ENST00000519503 CYFIP1Q7L576 1253 aa24.91■■□□□ 1.58
CHMP7-205ENST00000519503 DHX32Q7L7V1 743 aaKnown RBP24.91■■□□□ 1.58
CHMP7-205ENST00000519503 RAB11FIP4Q86YS3 637 aa24.91■■□□□ 1.58
CHMP7-205ENST00000519503 TEX2Q8IWB9 1127 aa24.91■■□□□ 1.58
CHMP7-205ENST00000519503 CXCL10P02778 98 aa24.9■■□□□ 1.58
CHMP7-205ENST00000519503 HMGB1P09429 215 aaKnown RBP24.9■■□□□ 1.58
CHMP7-205ENST00000519503 KCNJ6P48051 423 aa24.9■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms