RNA–Protein interactions for RNA: ENST00000518387.1

CTD-2270F17.1-201, humanhuman

TSL 1 (best) BASIC

Gene CTD-2270F17.1, Length 1,215 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTD-2270F17.1-201ENST00000518387 EFCAB3Q8N7B9 438 aa12.44□□□□□ -0.42
CTD-2270F17.1-201ENST00000518387 TSEN34Q9BSV6 310 aaKnown RBP12.44□□□□□ -0.42
CTD-2270F17.1-201ENST00000518387 BARHL2Q9NY43 387 aa12.44□□□□□ -0.42
CTD-2270F17.1-201ENST00000518387 RTEL1Q9NZ71 1219 aa12.44□□□□□ -0.42
CTD-2270F17.1-201ENST00000518387 FRMPD4Q14CM0 1322 aa12.43□□□□□ -0.42
CTD-2270F17.1-201ENST00000518387 FAM205CA6NFA0 338 aa12.43□□□□□ -0.42
CTD-2270F17.1-201ENST00000518387 SMCO2A6NFE2 343 aa12.43□□□□□ -0.42
CTD-2270F17.1-201ENST00000518387 hCG_1984214I3L0E3 225 aa12.43□□□□□ -0.42
CTD-2270F17.1-201ENST00000518387 PIK3CDO00329 1044 aa12.43□□□□□ -0.42
CTD-2270F17.1-201ENST00000518387 ZEB2O60315 1214 aa12.43□□□□□ -0.42
CTD-2270F17.1-201ENST00000518387 RGS20O76081 388 aa12.43□□□□□ -0.42
CTD-2270F17.1-201ENST00000518387 CPT1AP50416 773 aa12.43□□□□□ -0.42
CTD-2270F17.1-201ENST00000518387 CHMP4BP1P59074 171 aa12.43□□□□□ -0.42
CTD-2270F17.1-201ENST00000518387 PSMC6P62333 389 aa12.43□□□□□ -0.42
CTD-2270F17.1-201ENST00000518387 MRPS9P82933 396 aaKnown RBP12.43□□□□□ -0.42
CTD-2270F17.1-201ENST00000518387 NTRK3Q16288 839 aa12.43□□□□□ -0.42
CTD-2270F17.1-201ENST00000518387 PPP1R18Q6NYC8 613 aa12.43□□□□□ -0.42
CTD-2270F17.1-201ENST00000518387 VSIG10LQ86VR7 867 aa12.43□□□□□ -0.42
CTD-2270F17.1-201ENST00000518387 ZNF713Q8N859 430 aaPredicted RBP12.43□□□□□ -0.42
CTD-2270F17.1-201ENST00000518387 PPP1R13LQ8WUF5 828 aa12.43□□□□□ -0.42
CTD-2270F17.1-201ENST00000518387 ZNF274Q96GC6 653 aaPredicted RBP12.43□□□□□ -0.42
CTD-2270F17.1-201ENST00000518387 SLKQ9H2G2 1235 aaPredicted RBP12.43□□□□□ -0.42
CTD-2270F17.1-201ENST00000518387 TMEM260Q9NX78 707 aa12.43□□□□□ -0.42
CTD-2270F17.1-201ENST00000518387 TPCN1Q9ULQ1 816 aa12.43□□□□□ -0.42
CTD-2270F17.1-201ENST00000518387 Q9Y3F1 56 aa12.43□□□□□ -0.42
CTD-2270F17.1-201ENST00000518387 SCN10AQ9Y5Y9 1956 aa12.42□□□□□ -0.42
CTD-2270F17.1-201ENST00000518387 NKRFO15226 690 aaKnown RBP eCLIP12.42□□□□□ -0.42
CTD-2270F17.1-201ENST00000518387 PRPF3O43395 683 aaKnown RBP12.42□□□□□ -0.42
CTD-2270F17.1-201ENST00000518387 LARGE1O95461 756 aa12.42□□□□□ -0.42
CTD-2270F17.1-201ENST00000518387 GH1P01241 217 aa12.42□□□□□ -0.42
CTD-2270F17.1-201ENST00000518387 IFNAR1P17181 557 aa12.42□□□□□ -0.42
CTD-2270F17.1-201ENST00000518387 TLE2Q04725 743 aa12.42□□□□□ -0.42
CTD-2270F17.1-201ENST00000518387 SSRP1Q08945 709 aaKnown RBP12.42□□□□□ -0.42
CTD-2270F17.1-201ENST00000518387 SCRN1Q12765 414 aa12.42□□□□□ -0.42
CTD-2270F17.1-201ENST00000518387 ANKRD1Q15327 319 aa12.42□□□□□ -0.42
CTD-2270F17.1-201ENST00000518387 PKN1Q16512 942 aa12.42□□□□□ -0.42
CTD-2270F17.1-201ENST00000518387 BRDTQ58F21 947 aaPredicted RBP12.42□□□□□ -0.42
CTD-2270F17.1-201ENST00000518387 CCDC62Q6P9F0 684 aa12.42□□□□□ -0.42
CTD-2270F17.1-201ENST00000518387 CPLX2Q6PUV4 134 aaKnown RBP12.42□□□□□ -0.42
CTD-2270F17.1-201ENST00000518387 TRIM22Q8IYM9 498 aa12.42□□□□□ -0.42
CTD-2270F17.1-201ENST00000518387 AFG1LQ8WV93 481 aa12.42□□□□□ -0.42
CTD-2270F17.1-201ENST00000518387 RNF26Q9BY78 433 aaPredicted RBP12.42□□□□□ -0.42
CTD-2270F17.1-201ENST00000518387 RIC8AQ9NPQ8 531 aa12.42□□□□□ -0.42
CTD-2270F17.1-201ENST00000518387 VPS54Q9P1Q0 977 aa12.42□□□□□ -0.42
CTD-2270F17.1-201ENST00000518387 RBM27Q9P2N5 1060 aaKnown RBP12.42□□□□□ -0.42
CTD-2270F17.1-201ENST00000518387 PRKAG2Q9UGJ0 569 aa12.42□□□□□ -0.42
CTD-2270F17.1-201ENST00000518387 PCDHA6Q9UN73 950 aa12.42□□□□□ -0.42
CTD-2270F17.1-201ENST00000518387 PCDHA8Q9Y5H6 950 aa12.42□□□□□ -0.42
CTD-2270F17.1-201ENST00000518387 A0A0U1RQG5 324 aaPredicted RBP12.41□□□□□ -0.42
CTD-2270F17.1-201ENST00000518387 GGPS1O95749 300 aa12.41□□□□□ -0.42
CTD-2270F17.1-201ENST00000518387 UBA1P22314 1058 aaKnown RBP12.41□□□□□ -0.42
CTD-2270F17.1-201ENST00000518387 ARHGAP1Q07960 439 aa12.41□□□□□ -0.42
CTD-2270F17.1-201ENST00000518387 SNX17Q15036 470 aa12.41□□□□□ -0.42
CTD-2270F17.1-201ENST00000518387 GNPTABQ3T906 1256 aa12.41□□□□□ -0.42
CTD-2270F17.1-201ENST00000518387 JAKMIP3Q5VZ66 844 aa12.41□□□□□ -0.42
CTD-2270F17.1-201ENST00000518387 PCNX4Q63HM2 1172 aa12.41□□□□□ -0.42
CTD-2270F17.1-201ENST00000518387 DHX37Q8IY37 1157 aaKnown RBP12.41□□□□□ -0.42
CTD-2270F17.1-201ENST00000518387 NECAB1Q8N987 351 aa12.41□□□□□ -0.42
CTD-2270F17.1-201ENST00000518387 SPRYD3Q8NCJ5 442 aa12.41□□□□□ -0.42
CTD-2270F17.1-201ENST00000518387 AIFM3Q96NN9 605 aa12.41□□□□□ -0.42
CTD-2270F17.1-201ENST00000518387 ANO3Q9BYT9 981 aa12.41□□□□□ -0.42
CTD-2270F17.1-201ENST00000518387 C22orf23Q9BZE7 217 aa12.41□□□□□ -0.42
CTD-2270F17.1-201ENST00000518387 EHMT1Q9H9B1 1298 aa12.41□□□□□ -0.42
CTD-2270F17.1-201ENST00000518387 PKD2L1Q9P0L9 805 aa12.41□□□□□ -0.42
CTD-2270F17.1-201ENST00000518387 DDX41Q9UJV9 622 aaKnown RBP12.41□□□□□ -0.42
CTD-2270F17.1-201ENST00000518387 ELP1O95163 1332 aa12.4□□□□□ -0.42
CTD-2270F17.1-201ENST00000518387 ADAMTS3O15072 1205 aa12.4□□□□□ -0.42
CTD-2270F17.1-201ENST00000518387 MMP3P08254 477 aa12.4□□□□□ -0.42
CTD-2270F17.1-201ENST00000518387 NKX3-2P78367 333 aa12.4□□□□□ -0.42
CTD-2270F17.1-201ENST00000518387 MDM2Q00987 491 aaPredicted RBP12.4□□□□□ -0.42
CTD-2270F17.1-201ENST00000518387 SP4Q02446 784 aa12.4□□□□□ -0.42
CTD-2270F17.1-201ENST00000518387 SH3RF1Q7Z6J0 888 aa12.4□□□□□ -0.42
CTD-2270F17.1-201ENST00000518387 CCDC148Q8NFR7 591 aa12.4□□□□□ -0.42
CTD-2270F17.1-201ENST00000518387 RASGRP4Q8TDF6 673 aa12.4□□□□□ -0.42
CTD-2270F17.1-201ENST00000518387 CCDC12Q8WUD4 166 aaPredicted RBP12.4□□□□□ -0.42
CTD-2270F17.1-201ENST00000518387 C6orf50Q9HD87 102 aa12.4□□□□□ -0.42
CTD-2270F17.1-201ENST00000518387 PDLIM7Q9NR12 457 aa12.4□□□□□ -0.42
CTD-2270F17.1-201ENST00000518387 POLR3EQ9NVU0 708 aa12.4□□□□□ -0.42
CTD-2270F17.1-201ENST00000518387 A6NJR5 290 aa12.39□□□□□ -0.43
CTD-2270F17.1-201ENST00000518387 ARVCFO00192 962 aa12.39□□□□□ -0.43
CTD-2270F17.1-201ENST00000518387 PFKFB2O60825 505 aa12.39□□□□□ -0.43
CTD-2270F17.1-201ENST00000518387 CABYRO75952 493 aa12.39□□□□□ -0.43
CTD-2270F17.1-201ENST00000518387 CDKL5O76039 1030 aa12.39□□□□□ -0.43
CTD-2270F17.1-201ENST00000518387 DEXIO95424 95 aa12.39□□□□□ -0.43
CTD-2270F17.1-201ENST00000518387 CLTBP09497 229 aa12.39□□□□□ -0.43
CTD-2270F17.1-201ENST00000518387 ZNF286BP0CG31 522 aa12.39□□□□□ -0.43
CTD-2270F17.1-201ENST00000518387 MAGEA10P43363 369 aaPredicted RBP12.39□□□□□ -0.43
CTD-2270F17.1-201ENST00000518387 NLRP5P59047 1200 aa12.39□□□□□ -0.43
CTD-2270F17.1-201ENST00000518387 PURAQ00577 322 aaKnown RBP12.39□□□□□ -0.43
CTD-2270F17.1-201ENST00000518387 SP2Q02086 613 aa12.39□□□□□ -0.43
CTD-2270F17.1-201ENST00000518387 SEMA3FQ13275 785 aa12.39□□□□□ -0.43
CTD-2270F17.1-201ENST00000518387 ITGA7Q13683 1181 aa12.39□□□□□ -0.43
CTD-2270F17.1-201ENST00000518387 ME3Q16798 604 aa12.39□□□□□ -0.43
CTD-2270F17.1-201ENST00000518387 FAM47CQ5HY64 1035 aa12.39□□□□□ -0.43
CTD-2270F17.1-201ENST00000518387 KCNV1Q6PIU1 500 aa12.39□□□□□ -0.43
CTD-2270F17.1-201ENST00000518387 NLRX1Q86UT6 975 aa12.39□□□□□ -0.43
CTD-2270F17.1-201ENST00000518387 REXO1Q8N1G1 1221 aaKnown RBP12.39□□□□□ -0.43
CTD-2270F17.1-201ENST00000518387 ZNF710Q8N1W2 664 aa12.39□□□□□ -0.43
CTD-2270F17.1-201ENST00000518387 IL17RAQ96F46 866 aa12.39□□□□□ -0.43
CTD-2270F17.1-201ENST00000518387 SPATA33Q96N06 139 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms