RNA–Protein interactions for RNA: ENST00000517940.1

AP3B1-203, Transcript of adaptor related protein complex 3 subunit beta 1, humanhuman

TSL 2

Gene AP3B1, Length 974 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3B1-203ENST00000517940 NEK8Q86SG6 692 aa13.47□□□□□ -0.25
AP3B1-203ENST00000517940 C4orf32Q8N8J7 132 aa13.47□□□□□ -0.25
AP3B1-203ENST00000517940 UIMC1Q96RL1 719 aa13.47□□□□□ -0.25
AP3B1-203ENST00000517940 FTOQ9C0B1 505 aaKnown RBP eCLIP13.47□□□□□ -0.25
AP3B1-203ENST00000517940 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.47□□□□□ -0.25
AP3B1-203ENST00000517940 TMEM60Q9H2L4 133 aa13.47□□□□□ -0.25
AP3B1-203ENST00000517940 DDX41Q9UJV9 622 aaKnown RBP13.47□□□□□ -0.25
AP3B1-203ENST00000517940 H3BQV1 296 aa13.46□□□□□ -0.25
AP3B1-203ENST00000517940 DHX15O43143 795 aaKnown RBP13.46□□□□□ -0.25
AP3B1-203ENST00000517940 CCL5P13501 91 aa13.46□□□□□ -0.25
AP3B1-203ENST00000517940 PDCP20941 246 aa13.46□□□□□ -0.25
AP3B1-203ENST00000517940 MNX1P50219 401 aaPredicted RBP13.46□□□□□ -0.25
AP3B1-203ENST00000517940 USP11P51784 963 aa13.46□□□□□ -0.25
AP3B1-203ENST00000517940 ARHGAP1Q07960 439 aa13.46□□□□□ -0.25
AP3B1-203ENST00000517940 LY6KQ17RY6 165 aa13.46□□□□□ -0.25
AP3B1-203ENST00000517940 IFFO2Q5TF58 517 aa13.46□□□□□ -0.25
AP3B1-203ENST00000517940 MCTP1Q6DN14 999 aa13.46□□□□□ -0.25
AP3B1-203ENST00000517940 MOXD1Q6UVY6 613 aa13.46□□□□□ -0.25
AP3B1-203ENST00000517940 NIPA1Q7RTP0 329 aa13.46□□□□□ -0.25
AP3B1-203ENST00000517940 ETNPPLQ8TBG4 499 aa13.46□□□□□ -0.25
AP3B1-203ENST00000517940 HAS1Q92839 578 aa13.46□□□□□ -0.25
AP3B1-203ENST00000517940 BRMS1Q9HCU9 246 aa13.46□□□□□ -0.25
AP3B1-203ENST00000517940 CNPY2Q9Y2B0 182 aa13.46□□□□□ -0.25
AP3B1-203ENST00000517940 PCDHB6Q9Y5E3 794 aa13.46□□□□□ -0.25
AP3B1-203ENST00000517940 MRVI1Q9Y6F6 885 aa13.46□□□□□ -0.25
AP3B1-203ENST00000517940 MSH4O15457 936 aa13.45□□□□□ -0.26
AP3B1-203ENST00000517940 ADAMTS4O75173 837 aa13.45□□□□□ -0.26
AP3B1-203ENST00000517940 STAM2O75886 525 aa13.45□□□□□ -0.26
AP3B1-203ENST00000517940 HSP90AA1P07900 732 aaKnown RBP13.45□□□□□ -0.26
AP3B1-203ENST00000517940 ZSCAN22P10073 491 aaPredicted RBP13.45□□□□□ -0.26
AP3B1-203ENST00000517940 SAFBQ15424 915 aaKnown RBP eCLIP13.45□□□□□ -0.26
AP3B1-203ENST00000517940 LETM2Q2VYF4 491 aa13.45□□□□□ -0.26
AP3B1-203ENST00000517940 Q4G0T1 1027 aa13.45□□□□□ -0.26
AP3B1-203ENST00000517940 DUSP28Q4G0W2 176 aa13.45□□□□□ -0.26
AP3B1-203ENST00000517940 PRR16Q569H4 304 aa13.45□□□□□ -0.26
AP3B1-203ENST00000517940 FOXD4L5Q5VV16 416 aaPredicted RBP13.45□□□□□ -0.26
AP3B1-203ENST00000517940 MYSM1Q5VVJ2 828 aa13.45□□□□□ -0.26
AP3B1-203ENST00000517940 PPP4R3AQ6IN85 833 aa13.45□□□□□ -0.26
AP3B1-203ENST00000517940 B3GNT9Q6UX72 402 aa13.45□□□□□ -0.26
AP3B1-203ENST00000517940 FOXD4L4Q8WXT5 416 aaPredicted RBP13.45□□□□□ -0.26
AP3B1-203ENST00000517940 GPRASP2Q96D09 838 aa13.45□□□□□ -0.26
AP3B1-203ENST00000517940 AGO4Q9HCK5 861 aaKnown RBP13.45□□□□□ -0.26
AP3B1-203ENST00000517940 KCNMB3Q9NPA1 279 aa13.45□□□□□ -0.26
AP3B1-203ENST00000517940 KCNH7Q9NS40 1196 aa13.45□□□□□ -0.26
AP3B1-203ENST00000517940 DDX20Q9UHI6 824 aaKnown RBP13.45□□□□□ -0.26
AP3B1-203ENST00000517940 SYNRGQ9UMZ2 1314 aa13.44□□□□□ -0.26
AP3B1-203ENST00000517940 FIBPO43427 364 aa13.44□□□□□ -0.26
AP3B1-203ENST00000517940 SORBS3O60504 671 aa13.44□□□□□ -0.26
AP3B1-203ENST00000517940 F13A1P00488 732 aa13.44□□□□□ -0.26
AP3B1-203ENST00000517940 AKR1A1P14550 325 aa13.44□□□□□ -0.26
AP3B1-203ENST00000517940 NKX3-2P78367 333 aa13.44□□□□□ -0.26
AP3B1-203ENST00000517940 MTMR1Q13613 665 aa13.44□□□□□ -0.26
AP3B1-203ENST00000517940 PLA2G4DQ86XP0 818 aa13.44□□□□□ -0.26
AP3B1-203ENST00000517940 SCFD2Q8WU76 684 aa13.44□□□□□ -0.26
AP3B1-203ENST00000517940 MTMR9Q96QG7 549 aa13.44□□□□□ -0.26
AP3B1-203ENST00000517940 CRISPLD2Q9H0B8 497 aa13.44□□□□□ -0.26
AP3B1-203ENST00000517940 UPF3AQ9H1J1 476 aaKnown RBP13.44□□□□□ -0.26
AP3B1-203ENST00000517940 EHMT1Q9H9B1 1298 aa13.44□□□□□ -0.26
AP3B1-203ENST00000517940 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.44□□□□□ -0.26
AP3B1-203ENST00000517940 CCNT1O60563 726 aaKnown RBP13.43□□□□□ -0.26
AP3B1-203ENST00000517940 FARP2O94887 1054 aaPredicted RBP13.43□□□□□ -0.26
AP3B1-203ENST00000517940 CCNE2O96020 404 aa13.43□□□□□ -0.26
AP3B1-203ENST00000517940 ATP2B1P20020 1258 aa13.43□□□□□ -0.26
AP3B1-203ENST00000517940 TNFAIP2Q03169 654 aa13.43□□□□□ -0.26
AP3B1-203ENST00000517940 SPIRE1Q08AE8 756 aa13.43□□□□□ -0.26
AP3B1-203ENST00000517940 IL17AQ16552 155 aa13.43□□□□□ -0.26
AP3B1-203ENST00000517940 TTC38Q5R3I4 469 aa13.43□□□□□ -0.26
AP3B1-203ENST00000517940 IQSEC1Q6DN90 963 aa13.43□□□□□ -0.26
AP3B1-203ENST00000517940 CCSAPQ6IQ19 270 aaPredicted RBP13.43□□□□□ -0.26
AP3B1-203ENST00000517940 SLC5A5Q92911 643 aa13.43□□□□□ -0.26
AP3B1-203ENST00000517940 HMX1Q9NP08 348 aaPredicted RBP13.43□□□□□ -0.26
AP3B1-203ENST00000517940 PKD2L1Q9P0L9 805 aa13.43□□□□□ -0.26
AP3B1-203ENST00000517940 DDX25Q9UHL0 483 aaKnown RBP13.43□□□□□ -0.26
AP3B1-203ENST00000517940 VAV3Q9UKW4 847 aa13.43□□□□□ -0.26
AP3B1-203ENST00000517940 FAM184BQ9ULE4 1060 aa13.43□□□□□ -0.26
AP3B1-203ENST00000517940 SCN10AQ9Y5Y9 1956 aa13.43□□□□□ -0.26
AP3B1-203ENST00000517940 B4DLN1 442 aa13.42□□□□□ -0.26
AP3B1-203ENST00000517940 DUSP11O75319 330 aaKnown RBP13.42□□□□□ -0.26
AP3B1-203ENST00000517940 GGPS1O95749 300 aa13.42□□□□□ -0.26
AP3B1-203ENST00000517940 PGK1P00558 417 aa13.42□□□□□ -0.26
AP3B1-203ENST00000517940 TXNP10599 105 aaKnown RBP13.42□□□□□ -0.26
AP3B1-203ENST00000517940 HOXD8P13378 290 aaPredicted RBP13.42□□□□□ -0.26
AP3B1-203ENST00000517940 GCFC2P16383 781 aaKnown RBP13.42□□□□□ -0.26
AP3B1-203ENST00000517940 MCM7P33993 719 aa13.42□□□□□ -0.26
AP3B1-203ENST00000517940 TRAPPC10P48553 1259 aa13.42□□□□□ -0.26
AP3B1-203ENST00000517940 GJA9P57773 515 aa13.42□□□□□ -0.26
AP3B1-203ENST00000517940 TTLL4Q14679 1199 aa13.42□□□□□ -0.26
AP3B1-203ENST00000517940 PTPAQ15257 358 aa13.42□□□□□ -0.26
AP3B1-203ENST00000517940 ZNF174Q15697 407 aa13.42□□□□□ -0.26
AP3B1-203ENST00000517940 HSDL1Q3SXM5 330 aa13.42□□□□□ -0.26
AP3B1-203ENST00000517940 CELF3Q5SZQ8 465 aaKnown RBP13.42□□□□□ -0.26
AP3B1-203ENST00000517940 BRAPQ7Z569 592 aa13.42□□□□□ -0.26
AP3B1-203ENST00000517940 TLK2Q86UE8 772 aa13.42□□□□□ -0.26
AP3B1-203ENST00000517940 KLHDC9Q8NEP7 349 aa13.42□□□□□ -0.26
AP3B1-203ENST00000517940 EMID1Q96A84 441 aaPredicted RBP13.42□□□□□ -0.26
AP3B1-203ENST00000517940 IPO9Q96P70 1041 aaKnown RBP13.42□□□□□ -0.26
AP3B1-203ENST00000517940 DEFB118Q96PH6 123 aa13.42□□□□□ -0.26
AP3B1-203ENST00000517940 USP28Q96RU2 1077 aa13.42□□□□□ -0.26
AP3B1-203ENST00000517940 SENP7Q9BQF6 1050 aa13.42□□□□□ -0.26
AP3B1-203ENST00000517940 RNF208Q9H0X6 261 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms