RNA–Protein interactions for RNA: ENST00000517709.1

MCM4-202, Transcript of minichromosome maintenance complex component 4, humanhuman

TSL 2

Gene MCM4, Length 842 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCM4-202ENST00000517709 STXBP3O00186 592 aa13.66□□□□□ -0.22
MCM4-202ENST00000517709 TLR3O15455 904 aaKnown RBP13.66□□□□□ -0.22
MCM4-202ENST00000517709 F2P00734 622 aa13.66□□□□□ -0.22
MCM4-202ENST00000517709 CASTP20810 708 aaKnown RBP13.66□□□□□ -0.22
MCM4-202ENST00000517709 GNAQP50148 359 aa13.66□□□□□ -0.22
MCM4-202ENST00000517709 MRPL12P52815 198 aaKnown RBP13.66□□□□□ -0.22
MCM4-202ENST00000517709 CHMP4BP1P59074 171 aa13.66□□□□□ -0.22
MCM4-202ENST00000517709 KRT32Q14532 448 aa13.66□□□□□ -0.22
MCM4-202ENST00000517709 FAM47CQ5HY64 1035 aa13.66□□□□□ -0.22
MCM4-202ENST00000517709 TMEM240Q5SV17 173 aa13.66□□□□□ -0.22
MCM4-202ENST00000517709 CELF3Q5SZQ8 465 aaKnown RBP13.66□□□□□ -0.22
MCM4-202ENST00000517709 MYSM1Q5VVJ2 828 aa13.66□□□□□ -0.22
MCM4-202ENST00000517709 GDF6Q6KF10 455 aaPredicted RBP13.66□□□□□ -0.22
MCM4-202ENST00000517709 DEFB123Q8N688 67 aa13.66□□□□□ -0.22
MCM4-202ENST00000517709 PPTC7Q8NI37 304 aa13.66□□□□□ -0.22
MCM4-202ENST00000517709 SMARCC2Q8TAQ2 1214 aa13.66□□□□□ -0.22
MCM4-202ENST00000517709 FAM161BQ96MY7 647 aa13.66□□□□□ -0.22
MCM4-202ENST00000517709 GUCD1Q96NT3 240 aa13.66□□□□□ -0.22
MCM4-202ENST00000517709 INPP4AQ96PE3 977 aaPredicted RBP13.66□□□□□ -0.22
MCM4-202ENST00000517709 AGXT2Q9BYV1 514 aa13.66□□□□□ -0.22
MCM4-202ENST00000517709 CXXC1Q9P0U4 656 aaPredicted RBP13.66□□□□□ -0.22
MCM4-202ENST00000517709 TRANK1O15050 2925 aa13.66□□□□□ -0.22
MCM4-202ENST00000517709 KAT6AQ92794 2004 aa13.66□□□□□ -0.22
MCM4-202ENST00000517709 GRXCR1A8MXD5 290 aa13.65□□□□□ -0.22
MCM4-202ENST00000517709 ADD1P35611 737 aaKnown RBP13.65□□□□□ -0.22
MCM4-202ENST00000517709 TOB2Q14106 344 aaPredicted RBP13.65□□□□□ -0.22
MCM4-202ENST00000517709 RASIP1Q5U651 963 aa13.65□□□□□ -0.22
MCM4-202ENST00000517709 BLOC1S2Q6QNY1 142 aa13.65□□□□□ -0.22
MCM4-202ENST00000517709 TRIM50Q86XT4 487 aa13.65□□□□□ -0.22
MCM4-202ENST00000517709 SAMD3Q8N6K7 520 aa13.65□□□□□ -0.22
MCM4-202ENST00000517709 LARP6Q9BRS8 491 aaKnown RBP13.65□□□□□ -0.22
MCM4-202ENST00000517709 TTYH1Q9H313 450 aaPredicted RBP13.65□□□□□ -0.22
MCM4-202ENST00000517709 RBM28Q9NW13 759 aaKnown RBP13.65□□□□□ -0.22
MCM4-202ENST00000517709 TMEM260Q9NX78 707 aa13.65□□□□□ -0.22
MCM4-202ENST00000517709 HAS3O00219 553 aa13.64□□□□□ -0.23
MCM4-202ENST00000517709 DTNBO60941 627 aa13.64□□□□□ -0.23
MCM4-202ENST00000517709 REC8O95072 547 aa13.64□□□□□ -0.23
MCM4-202ENST00000517709 ITGB5P18084 799 aa13.64□□□□□ -0.23
MCM4-202ENST00000517709 PSEN2P49810 448 aa13.64□□□□□ -0.23
MCM4-202ENST00000517709 METAP2P50579 478 aaKnown RBP eCLIP13.64□□□□□ -0.239e-10■■■■□ 22.2
MCM4-202ENST00000517709 ZNF200P98182 395 aaPredicted RBP13.64□□□□□ -0.23
MCM4-202ENST00000517709 PPIGQ13427 754 aaKnown RBP eCLIP13.64□□□□□ -0.23
MCM4-202ENST00000517709 PCNX4Q63HM2 1172 aa13.64□□□□□ -0.23
MCM4-202ENST00000517709 NFRKBQ6P4R8 1299 aa13.64□□□□□ -0.23
MCM4-202ENST00000517709 ZNF365Q70YC5 407 aa13.64□□□□□ -0.23
MCM4-202ENST00000517709 DHX37Q8IY37 1157 aaKnown RBP13.64□□□□□ -0.23
MCM4-202ENST00000517709 SPATA33Q96N06 139 aa13.64□□□□□ -0.23
MCM4-202ENST00000517709 C16orf70Q9BSU1 422 aa13.64□□□□□ -0.23
MCM4-202ENST00000517709 ALG1Q9BT22 464 aa13.64□□□□□ -0.23
MCM4-202ENST00000517709 USP26Q9BXU7 913 aa13.64□□□□□ -0.23
MCM4-202ENST00000517709 PSTPIP2Q9H939 334 aa13.64□□□□□ -0.23
MCM4-202ENST00000517709 NCOA5Q9HCD5 579 aaKnown RBP13.64□□□□□ -0.23
MCM4-202ENST00000517709 MTMR10Q9NXD2 777 aa13.64□□□□□ -0.23
MCM4-202ENST00000517709 HDAC6Q9UBN7 1215 aa13.64□□□□□ -0.23
MCM4-202ENST00000517709 NAP1L2Q9ULW6 460 aaPredicted RBP13.64□□□□□ -0.23
MCM4-202ENST00000517709 SPATA31C2B4DYI2 1134 aa13.63□□□□□ -0.23
MCM4-202ENST00000517709 ATP9AO75110 1047 aa13.63□□□□□ -0.23
MCM4-202ENST00000517709 ICAM3P32942 547 aa13.63□□□□□ -0.23
MCM4-202ENST00000517709 PBX2P40425 430 aa13.63□□□□□ -0.23
MCM4-202ENST00000517709 TRAF1Q13077 416 aa13.63□□□□□ -0.23
MCM4-202ENST00000517709 MFSD10Q14728 455 aa13.63□□□□□ -0.23
MCM4-202ENST00000517709 GPNMBQ14956 572 aa13.63□□□□□ -0.23
MCM4-202ENST00000517709 NTRK3Q16288 839 aa13.63□□□□□ -0.23
MCM4-202ENST00000517709 PKN1Q16512 942 aa13.63□□□□□ -0.23
MCM4-202ENST00000517709 DGKDQ16760 1214 aa13.63□□□□□ -0.23
MCM4-202ENST00000517709 TCTN1Q2MV58 587 aa13.63□□□□□ -0.23
MCM4-202ENST00000517709 GPR153Q6NV75 609 aa13.63□□□□□ -0.23
MCM4-202ENST00000517709 PHKBQ93100 1093 aa13.63□□□□□ -0.23
MCM4-202ENST00000517709 UPF3BQ9BZI7 483 aaKnown RBP13.63□□□□□ -0.23
MCM4-202ENST00000517709 IL23AQ9NPF7 189 aa13.63□□□□□ -0.23
MCM4-202ENST00000517709 PKD2L1Q9P0L9 805 aa13.63□□□□□ -0.23
MCM4-202ENST00000517709 V9GY48 417 aaPredicted RBP13.63□□□□□ -0.23
MCM4-202ENST00000517709 ATG2AQ2TAZ0 1938 aa13.62□□□□□ -0.23
MCM4-202ENST00000517709 LGALS2P05162 132 aa13.62□□□□□ -0.23
MCM4-202ENST00000517709 HMGB1P09429 215 aaKnown RBP13.62□□□□□ -0.23
MCM4-202ENST00000517709 KCNA2P16389 499 aa13.62□□□□□ -0.23
MCM4-202ENST00000517709 CLK2P49760 499 aaKnown RBP13.62□□□□□ -0.23
MCM4-202ENST00000517709 RCAN1P53805 252 aa13.62□□□□□ -0.23
MCM4-202ENST00000517709 NAPAP54920 295 aa13.62□□□□□ -0.23
MCM4-202ENST00000517709 SP4Q02446 784 aa13.62□□□□□ -0.23
MCM4-202ENST00000517709 LAMC2Q13753 1193 aa13.62□□□□□ -0.23
MCM4-202ENST00000517709 KIAA0753Q2KHM9 967 aa13.62□□□□□ -0.23
MCM4-202ENST00000517709 BRDTQ58F21 947 aaPredicted RBP13.62□□□□□ -0.23
MCM4-202ENST00000517709 TRAF7Q6Q0C0 670 aa13.62□□□□□ -0.23
MCM4-202ENST00000517709 SYNE3Q6ZMZ3 975 aa13.62□□□□□ -0.23
MCM4-202ENST00000517709 CYFIP1Q7L576 1253 aa13.62□□□□□ -0.23
MCM4-202ENST00000517709 SESTD1Q86VW0 696 aa13.62□□□□□ -0.23
MCM4-202ENST00000517709 TMEM199Q8N511 208 aa13.62□□□□□ -0.23
MCM4-202ENST00000517709 CYP2W1Q8TAV3 490 aa13.62□□□□□ -0.23
MCM4-202ENST00000517709 CUL5Q93034 780 aa13.62□□□□□ -0.23
MCM4-202ENST00000517709 GPR20Q99678 358 aa13.62□□□□□ -0.23
MCM4-202ENST00000517709 ANO3Q9BYT9 981 aa13.62□□□□□ -0.23
MCM4-202ENST00000517709 BARHL2Q9NY43 387 aa13.62□□□□□ -0.23
MCM4-202ENST00000517709 GTF2IRD1Q9UHL9 959 aa13.62□□□□□ -0.23
MCM4-202ENST00000517709 PCDHA6Q9UN73 950 aa13.62□□□□□ -0.23
MCM4-202ENST00000517709 PCDHA8Q9Y5H6 950 aa13.62□□□□□ -0.23
MCM4-202ENST00000517709 VCANP13611 3396 aa13.61□□□□□ -0.23
MCM4-202ENST00000517709 FIBPO43427 364 aa13.61□□□□□ -0.23
MCM4-202ENST00000517709 KPNA6O60684 536 aa13.61□□□□□ -0.23
MCM4-202ENST00000517709 PTGISQ16647 500 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms