RNA–Protein interactions for RNA: ENST00000517417.2

PCDHGA1-202, Transcript of protocadherin gamma subfamily A, 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PCDHGA1, Length 4,604 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA1-202ENST00000517417 NTRK3Q16288 839 aa11.87□□□□□ -0.51
PCDHGA1-202ENST00000517417 ZNF365Q70YC5 407 aa11.87□□□□□ -0.51
PCDHGA1-202ENST00000517417 U2AF1L4Q8WU68 220 aaKnown RBP11.87□□□□□ -0.51
PCDHGA1-202ENST00000517417 IQCDQ96DY2 449 aa11.87□□□□□ -0.51
PCDHGA1-202ENST00000517417 DHTKD1Q96HY7 919 aaPredicted RBP11.87□□□□□ -0.51
PCDHGA1-202ENST00000517417 PIGSQ96S52 555 aa11.87□□□□□ -0.51
PCDHGA1-202ENST00000517417 TSKSQ9UJT2 592 aa11.87□□□□□ -0.51
PCDHGA1-202ENST00000517417 STAT1P42224 750 aa11.87□□□□□ -0.51
PCDHGA1-202ENST00000517417 CACNB1Q02641 598 aaPredicted RBP11.87□□□□□ -0.51
PCDHGA1-202ENST00000517417 ADAM9Q13443 819 aa11.87□□□□□ -0.51
PCDHGA1-202ENST00000517417 LRRC41Q15345 812 aa11.87□□□□□ -0.51
PCDHGA1-202ENST00000517417 FAM178BQ8IXR5 827 aa11.87□□□□□ -0.51
PCDHGA1-202ENST00000517417 NAP1L3Q99457 506 aaPredicted RBP11.87□□□□□ -0.51
PCDHGA1-202ENST00000517417 PPP1R3GB7ZBB8 358 aa11.87□□□□□ -0.51
PCDHGA1-202ENST00000517417 HGSO14964 777 aaPredicted RBP11.87□□□□□ -0.51
PCDHGA1-202ENST00000517417 DKC1O60832 514 aaKnown RBP eCLIP11.87□□□□□ -0.51
PCDHGA1-202ENST00000517417 BCRP11274 1271 aa11.87□□□□□ -0.51
PCDHGA1-202ENST00000517417 PRDX5P30044 214 aa11.87□□□□□ -0.51
PCDHGA1-202ENST00000517417 POLR2FP61218 127 aaKnown RBP11.87□□□□□ -0.51
PCDHGA1-202ENST00000517417 RASSF7Q02833 373 aa11.87□□□□□ -0.51
PCDHGA1-202ENST00000517417 GUCY2DQ02846 1103 aa11.87□□□□□ -0.51
PCDHGA1-202ENST00000517417 TBC1D10BQ4KMP7 808 aaPredicted RBP11.87□□□□□ -0.51
PCDHGA1-202ENST00000517417 DCUN1D2Q6PH85 259 aa11.87□□□□□ -0.51
PCDHGA1-202ENST00000517417 ENAHQ8N8S7 591 aaPredicted RBP11.87□□□□□ -0.51
PCDHGA1-202ENST00000517417 MAK16Q9BXY0 300 aaKnown RBP11.87□□□□□ -0.51
PCDHGA1-202ENST00000517417 NSRP1Q9H0G5 558 aaKnown RBP11.87□□□□□ -0.51
PCDHGA1-202ENST00000517417 STMN4Q9H169 189 aaPredicted RBP11.87□□□□□ -0.51
PCDHGA1-202ENST00000517417 DISC1Q9NRI5 854 aa11.87□□□□□ -0.51
PCDHGA1-202ENST00000517417 POLR2MP0CAP2 368 aa11.87□□□□□ -0.51
PCDHGA1-202ENST00000517417 MXRA7P84157 204 aa11.87□□□□□ -0.51
PCDHGA1-202ENST00000517417 CEP85LQ5SZL2 805 aa11.87□□□□□ -0.51
PCDHGA1-202ENST00000517417 FAM102BQ5T8I3 360 aa11.87□□□□□ -0.51
PCDHGA1-202ENST00000517417 TBCKQ8TEA7 893 aa11.87□□□□□ -0.51
PCDHGA1-202ENST00000517417 PPANQ9NQ55 473 aaKnown RBP11.87□□□□□ -0.51
PCDHGA1-202ENST00000517417 ASIC3Q9UHC3 531 aa11.87□□□□□ -0.51
PCDHGA1-202ENST00000517417 KDM6AO15550 1401 aaPredicted RBP11.86□□□□□ -0.51
PCDHGA1-202ENST00000517417 A0A0U1RQJ8 604 aa11.86□□□□□ -0.51
PCDHGA1-202ENST00000517417 PPEF1O14829 653 aaPredicted RBP11.86□□□□□ -0.51
PCDHGA1-202ENST00000517417 TMTC3Q6ZXV5 915 aa11.86□□□□□ -0.51
PCDHGA1-202ENST00000517417 CNKSR1Q969H4 720 aa11.86□□□□□ -0.51
PCDHGA1-202ENST00000517417 KDM3AQ9Y4C1 1321 aa11.86□□□□□ -0.51
PCDHGA1-202ENST00000517417 LRRIQ3A6PVS8 624 aaPredicted RBP11.86□□□□□ -0.51
PCDHGA1-202ENST00000517417 ZNF185O15231 689 aa11.86□□□□□ -0.51
PCDHGA1-202ENST00000517417 BBOX1O75936 387 aa11.86□□□□□ -0.51
PCDHGA1-202ENST00000517417 XKR9Q5GH70 373 aa11.86□□□□□ -0.51
PCDHGA1-202ENST00000517417 GALNT17Q6IS24 598 aa11.86□□□□□ -0.51
PCDHGA1-202ENST00000517417 UBL4BQ8N7F7 174 aa11.86□□□□□ -0.51
PCDHGA1-202ENST00000517417 ANKS4BQ8N8V4 417 aa11.86□□□□□ -0.51
PCDHGA1-202ENST00000517417 VIPAS39Q9H9C1 493 aa11.86□□□□□ -0.51
PCDHGA1-202ENST00000517417 TXNDC16Q9P2K2 825 aa11.86□□□□□ -0.51
PCDHGA1-202ENST00000517417 LCMT1Q9UIC8 334 aa11.86□□□□□ -0.51
PCDHGA1-202ENST00000517417 HPCAL4Q9UM19 191 aa11.86□□□□□ -0.51
PCDHGA1-202ENST00000517417 TFR2Q9UP52 801 aa11.86□□□□□ -0.51
PCDHGA1-202ENST00000517417 FAM169AQ9Y6X4 670 aa11.86□□□□□ -0.51
PCDHGA1-202ENST00000517417 STAMBPO95630 424 aa11.86□□□□□ -0.51
PCDHGA1-202ENST00000517417 EIF4A3P38919 411 aaKnown RBP11.86□□□□□ -0.51
PCDHGA1-202ENST00000517417 RCAN1P53805 252 aa11.86□□□□□ -0.51
PCDHGA1-202ENST00000517417 TMEM139Q8IV31 216 aa11.86□□□□□ -0.51
PCDHGA1-202ENST00000517417 SMCR8Q8TEV9 937 aaPredicted RBP11.86□□□□□ -0.51
PCDHGA1-202ENST00000517417 AMNQ9BXJ7 453 aa11.86□□□□□ -0.51
PCDHGA1-202ENST00000517417 PCDHA4Q9UN74 947 aa11.86□□□□□ -0.51
PCDHGA1-202ENST00000517417 UTP11Q9Y3A2 253 aaKnown RBP11.86□□□□□ -0.51
PCDHGA1-202ENST00000517417 PCDHA13Q9Y5I0 950 aa11.86□□□□□ -0.51
PCDHGA1-202ENST00000517417 RAD17O75943 681 aa11.85□□□□□ -0.51
PCDHGA1-202ENST00000517417 CCNE1P24864 410 aa11.85□□□□□ -0.51
PCDHGA1-202ENST00000517417 ATP2C1P98194 919 aaPredicted RBP11.85□□□□□ -0.51
PCDHGA1-202ENST00000517417 TNFAIP1Q13829 316 aa11.85□□□□□ -0.51
PCDHGA1-202ENST00000517417 CCDC6Q16204 474 aa11.85□□□□□ -0.51
PCDHGA1-202ENST00000517417 ARHGEF16Q5VV41 709 aa11.85□□□□□ -0.51
PCDHGA1-202ENST00000517417 ANO9A1A5B4 782 aa11.85□□□□□ -0.51
PCDHGA1-202ENST00000517417 VIMP08670 466 aaKnown RBP11.85□□□□□ -0.51
PCDHGA1-202ENST00000517417 CCDC105Q8IYK2 499 aa11.85□□□□□ -0.51
PCDHGA1-202ENST00000517417 MYCBPQ99417 103 aaPredicted RBP11.85□□□□□ -0.51
PCDHGA1-202ENST00000517417 TRIM6Q9C030 488 aaPredicted RBP11.85□□□□□ -0.51
PCDHGA1-202ENST00000517417 CPVLQ9H3G5 476 aa11.85□□□□□ -0.51
PCDHGA1-202ENST00000517417 EPB41L5Q9HCM4 733 aa11.85□□□□□ -0.51
PCDHGA1-202ENST00000517417 LARSQ9P2J5 1176 aaKnown RBP11.85□□□□□ -0.51
PCDHGA1-202ENST00000517417 RGPD2P0DJD1 1756 aa11.85□□□□□ -0.51
PCDHGA1-202ENST00000517417 HEXIM1O94992 359 aaKnown RBP11.85□□□□□ -0.51
PCDHGA1-202ENST00000517417 MAP2K2P36507 400 aa11.85□□□□□ -0.51
PCDHGA1-202ENST00000517417 SARSP49591 514 aaKnown RBP11.85□□□□□ -0.51
PCDHGA1-202ENST00000517417 KIF11P52732 1056 aa11.85□□□□□ -0.51
PCDHGA1-202ENST00000517417 MDM2Q00987 491 aaPredicted RBP11.85□□□□□ -0.51
PCDHGA1-202ENST00000517417 ARL6IP4Q66PJ3 421 aaKnown RBP11.85□□□□□ -0.51
PCDHGA1-202ENST00000517417 ADAT2Q7Z6V5 191 aaKnown RBP11.85□□□□□ -0.51
PCDHGA1-202ENST00000517417 MLXIPQ9HAP2 919 aa11.85□□□□□ -0.51
PCDHGA1-202ENST00000517417 RAB21Q9UL25 225 aa11.85□□□□□ -0.51
PCDHGA1-202ENST00000517417 MRPL11Q9Y3B7 192 aaKnown RBP11.85□□□□□ -0.51
PCDHGA1-202ENST00000517417 TARSL2A2RTX5 802 aaKnown RBP11.85□□□□□ -0.51
PCDHGA1-202ENST00000517417 TTLL1O95922 423 aa11.85□□□□□ -0.51
PCDHGA1-202ENST00000517417 CYP2D6P10635 497 aa11.85□□□□□ -0.51
PCDHGA1-202ENST00000517417 PDCLQ13371 301 aa11.85□□□□□ -0.51
PCDHGA1-202ENST00000517417 NNTQ13423 1086 aa11.85□□□□□ -0.51
PCDHGA1-202ENST00000517417 GPATCH4Q5T3I0 446 aaKnown RBP11.85□□□□□ -0.51
PCDHGA1-202ENST00000517417 LIN9Q5TKA1 542 aa11.85□□□□□ -0.51
PCDHGA1-202ENST00000517417 LRRC31Q6UY01 552 aa11.85□□□□□ -0.51
PCDHGA1-202ENST00000517417 MMS22LQ6ZRQ5 1243 aa11.85□□□□□ -0.51
PCDHGA1-202ENST00000517417 CCDC17Q96LX7 622 aa11.85□□□□□ -0.51
PCDHGA1-202ENST00000517417 KRT12Q99456 494 aa11.85□□□□□ -0.51
PCDHGA1-202ENST00000517417 PHF20Q9BVI0 1012 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms