RNA–Protein interactions for RNA: ENST00000517352.1

TNFRSF11B-202, Transcript of TNF receptor superfamily member 11b, humanhuman

TSL 1 (best)

Gene TNFRSF11B, Length 1,144 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11B-202ENST00000517352 CKBP12277 381 aa8.54□□□□□ -1.04
TNFRSF11B-202ENST00000517352 EDNRBP24530 442 aa8.54□□□□□ -1.04
TNFRSF11B-202ENST00000517352 NOVP48745 357 aa8.54□□□□□ -1.04
TNFRSF11B-202ENST00000517352 KCNQ1P51787 676 aa8.54□□□□□ -1.04
TNFRSF11B-202ENST00000517352 TAP1Q03518 808 aa8.54□□□□□ -1.04
TNFRSF11B-202ENST00000517352 PTK7Q13308 1070 aa8.54□□□□□ -1.04
TNFRSF11B-202ENST00000517352 CSPP1Q1MSJ5 1256 aa8.54□□□□□ -1.04
TNFRSF11B-202ENST00000517352 GDF6Q6KF10 455 aaPredicted RBP8.54□□□□□ -1.04
TNFRSF11B-202ENST00000517352 CATIPQ7Z7H3 387 aa8.54□□□□□ -1.04
TNFRSF11B-202ENST00000517352 MYOCDQ8IZQ8 938 aa8.54□□□□□ -1.04
TNFRSF11B-202ENST00000517352 PIBF1Q8WXW3 757 aa8.54□□□□□ -1.04
TNFRSF11B-202ENST00000517352 NECAB3Q96P71 396 aaPredicted RBP8.54□□□□□ -1.04
TNFRSF11B-202ENST00000517352 UIMC1Q96RL1 719 aa8.54□□□□□ -1.04
TNFRSF11B-202ENST00000517352 TGS1Q96RS0 853 aaKnown RBP8.54□□□□□ -1.04
TNFRSF11B-202ENST00000517352 YME1L1Q96TA2 773 aa8.54□□□□□ -1.04
TNFRSF11B-202ENST00000517352 PXMP2Q9NR77 195 aa8.54□□□□□ -1.04
TNFRSF11B-202ENST00000517352 MAP3K20Q9NYL2 800 aaKnown RBP8.54□□□□□ -1.04
TNFRSF11B-202ENST00000517352 ZSWIM5Q9P217 1185 aa8.54□□□□□ -1.04
TNFRSF11B-202ENST00000517352 HDAC6Q9UBN7 1215 aa8.54□□□□□ -1.04
TNFRSF11B-202ENST00000517352 SEC63Q9UGP8 760 aaKnown RBP8.54□□□□□ -1.04
TNFRSF11B-202ENST00000517352 GTF2IRD1Q9UHL9 959 aa8.54□□□□□ -1.04
TNFRSF11B-202ENST00000517352 DDX41Q9UJV9 622 aaKnown RBP8.54□□□□□ -1.04
TNFRSF11B-202ENST00000517352 ZNF215Q9UL58 517 aaPredicted RBP8.54□□□□□ -1.04
TNFRSF11B-202ENST00000517352 INSL6Q9Y581 213 aa8.54□□□□□ -1.04
TNFRSF11B-202ENST00000517352 TTC28Q96AY4 2481 aa8.54□□□□□ -1.04
TNFRSF11B-202ENST00000517352 NEDD4P46934 1319 aa8.54□□□□□ -1.04
TNFRSF11B-202ENST00000517352 RSPH10B2B2RC85 870 aa8.53□□□□□ -1.04
TNFRSF11B-202ENST00000517352 ZBTB5O15062 677 aa8.53□□□□□ -1.04
TNFRSF11B-202ENST00000517352 UPP2O95045 317 aa8.53□□□□□ -1.04
TNFRSF11B-202ENST00000517352 ARIH2O95376 493 aa8.53□□□□□ -1.04
TNFRSF11B-202ENST00000517352 GGPS1O95749 300 aa8.53□□□□□ -1.04
TNFRSF11B-202ENST00000517352 RSPH10BP0C881 870 aa8.53□□□□□ -1.04
TNFRSF11B-202ENST00000517352 HOXA13P31271 388 aaPredicted RBP8.53□□□□□ -1.04
TNFRSF11B-202ENST00000517352 WDR5P61964 334 aaKnown RBP8.53□□□□□ -1.04
TNFRSF11B-202ENST00000517352 ARHGAP1Q07960 439 aa8.53□□□□□ -1.04
TNFRSF11B-202ENST00000517352 GRB10Q13322 594 aa8.53□□□□□ -1.04
TNFRSF11B-202ENST00000517352 NFXL1Q6ZNB6 911 aa8.53□□□□□ -1.04
TNFRSF11B-202ENST00000517352 IFNLR1Q8IU57 520 aaPredicted RBP8.53□□□□□ -1.04
TNFRSF11B-202ENST00000517352 ENAHQ8N8S7 591 aaPredicted RBP8.53□□□□□ -1.04
TNFRSF11B-202ENST00000517352 PPTC7Q8NI37 304 aa8.53□□□□□ -1.04
TNFRSF11B-202ENST00000517352 SMARCC2Q8TAQ2 1214 aa8.53□□□□□ -1.04
TNFRSF11B-202ENST00000517352 SEPT8Q92599 483 aa8.53□□□□□ -1.04
TNFRSF11B-202ENST00000517352 TBC1D5Q92609 795 aa8.53□□□□□ -1.04
TNFRSF11B-202ENST00000517352 ATP6V0A1Q93050 837 aa8.53□□□□□ -1.04
TNFRSF11B-202ENST00000517352 DSCC1Q9BVC3 393 aa8.53□□□□□ -1.04
TNFRSF11B-202ENST00000517352 JMJD4Q9H9V9 463 aa8.53□□□□□ -1.04
TNFRSF11B-202ENST00000517352 FAM50BQ9Y247 325 aa8.53□□□□□ -1.04
TNFRSF11B-202ENST00000517352 LGR5O75473 907 aa8.52□□□□□ -1.05
TNFRSF11B-202ENST00000517352 GJB5O95377 273 aa8.52□□□□□ -1.05
TNFRSF11B-202ENST00000517352 TGFB3P10600 412 aa8.52□□□□□ -1.05
TNFRSF11B-202ENST00000517352 BMP1P13497 986 aa8.52□□□□□ -1.05
TNFRSF11B-202ENST00000517352 SP4Q02446 784 aa8.52□□□□□ -1.05
TNFRSF11B-202ENST00000517352 NEDD9Q14511 834 aa8.52□□□□□ -1.05
TNFRSF11B-202ENST00000517352 WTAPQ15007 396 aa8.52□□□□□ -1.05
TNFRSF11B-202ENST00000517352 TMEM31Q5JXX7 168 aa8.52□□□□□ -1.05
TNFRSF11B-202ENST00000517352 KRT40Q6A162 431 aa8.52□□□□□ -1.05
TNFRSF11B-202ENST00000517352 CCDC62Q6P9F0 684 aa8.52□□□□□ -1.05
TNFRSF11B-202ENST00000517352 TMCO2Q7Z6W1 182 aaPredicted RBP8.52□□□□□ -1.05
TNFRSF11B-202ENST00000517352 RSPH3Q86UC2 560 aa8.52□□□□□ -1.05
TNFRSF11B-202ENST00000517352 NLRX1Q86UT6 975 aa8.52□□□□□ -1.05
TNFRSF11B-202ENST00000517352 SESTD1Q86VW0 696 aa8.52□□□□□ -1.05
TNFRSF11B-202ENST00000517352 FBXO22Q8NEZ5 403 aa8.52□□□□□ -1.05
TNFRSF11B-202ENST00000517352 CTCFLQ8NI51 663 aaPredicted RBP8.52□□□□□ -1.05
TNFRSF11B-202ENST00000517352 GDPD5Q8WTR4 605 aa8.52□□□□□ -1.05
TNFRSF11B-202ENST00000517352 USP26Q9BXU7 913 aa8.52□□□□□ -1.05
TNFRSF11B-202ENST00000517352 ZMYND15Q9H091 742 aa8.52□□□□□ -1.05
TNFRSF11B-202ENST00000517352 LMCD1Q9NZU5 365 aa8.52□□□□□ -1.05
TNFRSF11B-202ENST00000517352 MYH7P12883 1935 aa8.52□□□□□ -1.05
TNFRSF11B-202ENST00000517352 MYH4Q9Y623 1939 aa8.52□□□□□ -1.05
TNFRSF11B-202ENST00000517352 SPTBN5Q9NRC6 3674 aaKnown RBP8.51□□□□□ -1.05
TNFRSF11B-202ENST00000517352 H3BRB1 525 aa8.51□□□□□ -1.05
TNFRSF11B-202ENST00000517352 CTSHP09668 335 aa8.51□□□□□ -1.05
TNFRSF11B-202ENST00000517352 POU3F3P20264 500 aaPredicted RBP8.51□□□□□ -1.05
TNFRSF11B-202ENST00000517352 KCNA5P22460 613 aa8.51□□□□□ -1.05
TNFRSF11B-202ENST00000517352 KIF5BP33176 963 aa8.51□□□□□ -1.05
TNFRSF11B-202ENST00000517352 NUCB1Q02818 461 aa8.51□□□□□ -1.05
TNFRSF11B-202ENST00000517352 CELF3Q5SZQ8 465 aaKnown RBP8.51□□□□□ -1.05
TNFRSF11B-202ENST00000517352 ZNF618Q5T7W0 954 aa8.51□□□□□ -1.05
TNFRSF11B-202ENST00000517352 UTP14CQ5TAP6 766 aaKnown RBP8.51□□□□□ -1.05
TNFRSF11B-202ENST00000517352 MYSM1Q5VVJ2 828 aa8.51□□□□□ -1.05
TNFRSF11B-202ENST00000517352 SAMD3Q8N6K7 520 aa8.51□□□□□ -1.05
TNFRSF11B-202ENST00000517352 GIMAP8Q8ND71 665 aaPredicted RBP8.51□□□□□ -1.05
TNFRSF11B-202ENST00000517352 ANKS1AQ92625 1134 aa8.51□□□□□ -1.05
TNFRSF11B-202ENST00000517352 TNPO1Q92973 898 aaKnown RBP8.51□□□□□ -1.05
TNFRSF11B-202ENST00000517352 EMID1Q96A84 441 aaPredicted RBP8.51□□□□□ -1.05
TNFRSF11B-202ENST00000517352 RRP36Q96EU6 259 aaKnown RBP8.51□□□□□ -1.05
TNFRSF11B-202ENST00000517352 MS4A3Q96HJ5 214 aa8.51□□□□□ -1.05
TNFRSF11B-202ENST00000517352 TUT1Q9H6E5 874 aaKnown RBP8.51□□□□□ -1.05
TNFRSF11B-202ENST00000517352 RTEL1Q9NZ71 1219 aa8.51□□□□□ -1.05
TNFRSF11B-202ENST00000517352 COL20A1Q9P218 1284 aa8.51□□□□□ -1.05
TNFRSF11B-202ENST00000517352 SALL3Q9BXA9 1300 aa8.51□□□□□ -1.05
TNFRSF11B-202ENST00000517352 PNMA6FA0A0J9YX94 578 aa8.5□□□□□ -1.05
TNFRSF11B-202ENST00000517352 LCHNA4D1U4 455 aa8.5□□□□□ -1.05
TNFRSF11B-202ENST00000517352 CCDC69A6NI79 296 aa8.5□□□□□ -1.05
TNFRSF11B-202ENST00000517352 STAM2O75886 525 aa8.5□□□□□ -1.05
TNFRSF11B-202ENST00000517352 F2P00734 622 aa8.5□□□□□ -1.05
TNFRSF11B-202ENST00000517352 DEFB103AP81534 67 aa8.5□□□□□ -1.05
TNFRSF11B-202ENST00000517352 ARHGAP4P98171 946 aa8.5□□□□□ -1.05
TNFRSF11B-202ENST00000517352 ZNF200P98182 395 aaPredicted RBP8.5□□□□□ -1.05
TNFRSF11B-202ENST00000517352 PGM5Q15124 567 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms