RNA–Protein interactions for RNA: ENST00000516768.1

SCARNA20-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 131 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20-201ENST00000516768 TLE2Q04725 743 aa12.76□□□□□ -0.37
SCARNA20-201ENST00000516768 SEMA3FQ13275 785 aa12.76□□□□□ -0.37
SCARNA20-201ENST00000516768 TRIM60Q495X7 471 aa12.76□□□□□ -0.37
SCARNA20-201ENST00000516768 NLRX1Q86UT6 975 aa12.76□□□□□ -0.37
SCARNA20-201ENST00000516768 NECAB1Q8N987 351 aa12.76□□□□□ -0.37
SCARNA20-201ENST00000516768 BICD2Q8TD16 824 aa12.76□□□□□ -0.37
SCARNA20-201ENST00000516768 AFG1LQ8WV93 481 aa12.76□□□□□ -0.37
SCARNA20-201ENST00000516768 GPRASP2Q96D09 838 aa12.76□□□□□ -0.37
SCARNA20-201ENST00000516768 SENP7Q9BQF6 1050 aa12.76□□□□□ -0.37
SCARNA20-201ENST00000516768 SEZ6LQ9BYH1 1024 aa12.76□□□□□ -0.37
SCARNA20-201ENST00000516768 BACH2Q9BYV9 841 aa12.76□□□□□ -0.37
SCARNA20-201ENST00000516768 BCAS3Q9H6U6 928 aa12.76□□□□□ -0.37
SCARNA20-201ENST00000516768 VPS54Q9P1Q0 977 aa12.76□□□□□ -0.37
SCARNA20-201ENST00000516768 ATP11BQ9Y2G3 1177 aa12.76□□□□□ -0.37
SCARNA20-201ENST00000516768 GRIN2DO15399 1336 aa12.76□□□□□ -0.37
SCARNA20-201ENST00000516768 A0A0U1RQG5 324 aaPredicted RBP12.75□□□□□ -0.37
SCARNA20-201ENST00000516768 FDPSP14324 419 aaKnown RBP12.75□□□□□ -0.37
SCARNA20-201ENST00000516768 SREBF1P36956 1147 aa12.75□□□□□ -0.37
SCARNA20-201ENST00000516768 NLRP5P59047 1200 aa12.75□□□□□ -0.37
SCARNA20-201ENST00000516768 ITGA7Q13683 1181 aa12.75□□□□□ -0.37
SCARNA20-201ENST00000516768 NEDD9Q14511 834 aa12.75□□□□□ -0.37
SCARNA20-201ENST00000516768 JAKMIP3Q5VZ66 844 aa12.75□□□□□ -0.37
SCARNA20-201ENST00000516768 CCDC148Q8NFR7 591 aa12.75□□□□□ -0.37
SCARNA20-201ENST00000516768 PPTC7Q8NI37 304 aa12.75□□□□□ -0.37
SCARNA20-201ENST00000516768 CRYGNQ8WXF5 182 aa12.75□□□□□ -0.37
SCARNA20-201ENST00000516768 GTF3C6Q969F1 213 aa12.75□□□□□ -0.37
SCARNA20-201ENST00000516768 CDHR1Q96JP9 859 aa12.75□□□□□ -0.37
SCARNA20-201ENST00000516768 ZSCAN31Q96LW9 406 aaPredicted RBP12.75□□□□□ -0.37
SCARNA20-201ENST00000516768 AIFM3Q96NN9 605 aa12.75□□□□□ -0.37
SCARNA20-201ENST00000516768 MXRA8Q9BRK3 442 aa12.75□□□□□ -0.37
SCARNA20-201ENST00000516768 ANO3Q9BYT9 981 aa12.75□□□□□ -0.37
SCARNA20-201ENST00000516768 MLXIPQ9HAP2 919 aa12.75□□□□□ -0.37
SCARNA20-201ENST00000516768 JADE2Q9NQC1 790 aa12.75□□□□□ -0.37
SCARNA20-201ENST00000516768 STK36Q9NRP7 1315 aa12.74□□□□□ -0.37
SCARNA20-201ENST00000516768 DCDC2CA8MYV0 355 aa12.74□□□□□ -0.37
SCARNA20-201ENST00000516768 MEIS1O00470 390 aa12.74□□□□□ -0.37
SCARNA20-201ENST00000516768 ATP9AO75110 1047 aa12.74□□□□□ -0.37
SCARNA20-201ENST00000516768 GGPS1O95749 300 aa12.74□□□□□ -0.37
SCARNA20-201ENST00000516768 MMP3P08254 477 aa12.74□□□□□ -0.37
SCARNA20-201ENST00000516768 MYL3P08590 195 aa12.74□□□□□ -0.37
SCARNA20-201ENST00000516768 CYP3A4P08684 503 aa12.74□□□□□ -0.37
SCARNA20-201ENST00000516768 UBA1P22314 1058 aaKnown RBP12.74□□□□□ -0.37
SCARNA20-201ENST00000516768 FAAP100Q0VG06 881 aa12.74□□□□□ -0.37
SCARNA20-201ENST00000516768 RABEP1Q15276 862 aa12.74□□□□□ -0.37
SCARNA20-201ENST00000516768 DGKDQ16760 1214 aa12.74□□□□□ -0.37
SCARNA20-201ENST00000516768 HSDL1Q3SXM5 330 aa12.74□□□□□ -0.37
SCARNA20-201ENST00000516768 GALNT17Q6IS24 598 aa12.74□□□□□ -0.37
SCARNA20-201ENST00000516768 REXO1Q8N1G1 1221 aaKnown RBP12.74□□□□□ -0.37
SCARNA20-201ENST00000516768 GIMAP8Q8ND71 665 aaPredicted RBP12.74□□□□□ -0.37
SCARNA20-201ENST00000516768 CYP2W1Q8TAV3 490 aa12.74□□□□□ -0.37
SCARNA20-201ENST00000516768 PGBD1Q96JS3 809 aa12.74□□□□□ -0.37
SCARNA20-201ENST00000516768 SPATA33Q96N06 139 aa12.74□□□□□ -0.37
SCARNA20-201ENST00000516768 TBC1D32Q96NH3 1257 aa12.74□□□□□ -0.37
SCARNA20-201ENST00000516768 MTG1Q9BT17 334 aaPredicted RBP12.74□□□□□ -0.37
SCARNA20-201ENST00000516768 ORC3Q9UBD5 711 aaPredicted RBP12.74□□□□□ -0.37
SCARNA20-201ENST00000516768 ZMYND8Q9ULU4 1186 aaPredicted RBP12.74□□□□□ -0.37
SCARNA20-201ENST00000516768 PCDHA4Q9UN74 947 aa12.74□□□□□ -0.37
SCARNA20-201ENST00000516768 KIAA1217Q5T5P2 1943 aa12.74□□□□□ -0.37
SCARNA20-201ENST00000516768 MROH7Q68CQ1 1323 aa12.73□□□□□ -0.37
SCARNA20-201ENST00000516768 M0R2N6 131 aa12.73□□□□□ -0.37
SCARNA20-201ENST00000516768 DTNBO60941 627 aa12.73□□□□□ -0.37
SCARNA20-201ENST00000516768 HOXD8P13378 290 aaPredicted RBP12.73□□□□□ -0.37
SCARNA20-201ENST00000516768 SYN1P17600 705 aa12.73□□□□□ -0.37
SCARNA20-201ENST00000516768 XBP1P17861 261 aa12.73□□□□□ -0.37
SCARNA20-201ENST00000516768 PSMC6P62333 389 aa12.73□□□□□ -0.37
SCARNA20-201ENST00000516768 ARHGAP4P98171 946 aa12.73□□□□□ -0.37
SCARNA20-201ENST00000516768 MTMR1Q13613 665 aa12.73□□□□□ -0.37
SCARNA20-201ENST00000516768 NPY5RQ15761 445 aa12.73□□□□□ -0.37
SCARNA20-201ENST00000516768 CEP55Q53EZ4 464 aa12.73□□□□□ -0.37
SCARNA20-201ENST00000516768 METTL7BQ6UX53 244 aa12.73□□□□□ -0.37
SCARNA20-201ENST00000516768 CYFIP1Q7L576 1253 aa12.73□□□□□ -0.37
SCARNA20-201ENST00000516768 DAGLBQ8NCG7 672 aa12.73□□□□□ -0.37
SCARNA20-201ENST00000516768 NSUN7Q8NE18 718 aaKnown RBP12.73□□□□□ -0.37
SCARNA20-201ENST00000516768 WASF1Q92558 559 aa12.73□□□□□ -0.37
SCARNA20-201ENST00000516768 PHF20Q9BVI0 1012 aa12.73□□□□□ -0.37
SCARNA20-201ENST00000516768 KCNH7Q9NS40 1196 aa12.73□□□□□ -0.37
SCARNA20-201ENST00000516768 LRRC37A2A6NM11 1700 aa12.73□□□□□ -0.37
SCARNA20-201ENST00000516768 TRIM43BA6NCK2 446 aa12.72□□□□□ -0.37
SCARNA20-201ENST00000516768 EDIL3O43854 480 aa12.72□□□□□ -0.37
SCARNA20-201ENST00000516768 PQBP1O60828 265 aaKnown RBP12.72□□□□□ -0.37
SCARNA20-201ENST00000516768 CD4P01730 458 aa12.72□□□□□ -0.37
SCARNA20-201ENST00000516768 CLTBP09497 229 aa12.72□□□□□ -0.37
SCARNA20-201ENST00000516768 KCNA2P16389 499 aa12.72□□□□□ -0.37
SCARNA20-201ENST00000516768 USP11P51784 963 aa12.72□□□□□ -0.37
SCARNA20-201ENST00000516768 ST3GAL1Q11201 340 aa12.72□□□□□ -0.37
SCARNA20-201ENST00000516768 NBPF20Q3BBV1 942 aa12.72□□□□□ -0.37
SCARNA20-201ENST00000516768 NFRKBQ6P4R8 1299 aa12.72□□□□□ -0.37
SCARNA20-201ENST00000516768 NIPA1Q7RTP0 329 aa12.72□□□□□ -0.37
SCARNA20-201ENST00000516768 SH3RF1Q7Z6J0 888 aa12.72□□□□□ -0.37
SCARNA20-201ENST00000516768 FAM126BQ8IXS8 530 aa12.72□□□□□ -0.37
SCARNA20-201ENST00000516768 BLIDQ8IZY5 108 aa12.72□□□□□ -0.37
SCARNA20-201ENST00000516768 RASGRP4Q8TDF6 673 aa12.72□□□□□ -0.37
SCARNA20-201ENST00000516768 KAT2BQ92831 832 aa12.72□□□□□ -0.37
SCARNA20-201ENST00000516768 TRIM43Q96BQ3 446 aaPredicted RBP12.72□□□□□ -0.37
SCARNA20-201ENST00000516768 GDF15Q99988 308 aa12.72□□□□□ -0.37
SCARNA20-201ENST00000516768 LLPHQ9BRT6 129 aaKnown RBP12.72□□□□□ -0.37
SCARNA20-201ENST00000516768 SH2B1Q9NRF2 756 aaPredicted RBP12.72□□□□□ -0.37
SCARNA20-201ENST00000516768 PRKAG2Q9UGJ0 569 aa12.72□□□□□ -0.37
SCARNA20-201ENST00000516768 CEP290O15078 2479 aa12.72□□□□□ -0.37
SCARNA20-201ENST00000516768 ALPK3Q96L96 1907 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms