RNA–Protein interactions for RNA: ENST00000515708.5

TSPAN17-209, Transcript of tetraspanin 17, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN17, Length 2,361 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN17-209ENST00000515708 LEMD3Q9Y2U8 911 aa18.6■□□□□ 0.57
TSPAN17-209ENST00000515708 GOLGA8KD6RF30 607 aa18.6■□□□□ 0.57
TSPAN17-209ENST00000515708 BUB1O43683 1085 aa18.6■□□□□ 0.57
TSPAN17-209ENST00000515708 TNFRSF8P28908 595 aa18.6■□□□□ 0.57
TSPAN17-209ENST00000515708 KCNMA1Q12791 1236 aa18.6■□□□□ 0.57
TSPAN17-209ENST00000515708 PSMD2Q13200 908 aa18.6■□□□□ 0.57
TSPAN17-209ENST00000515708 C8orf74Q6P047 294 aa18.6■□□□□ 0.57
TSPAN17-209ENST00000515708 FOXR2Q6PJQ5 311 aa18.6■□□□□ 0.57
TSPAN17-209ENST00000515708 PTF1AQ7RTS3 328 aa18.6■□□□□ 0.57
TSPAN17-209ENST00000515708 TSEN2Q8NCE0 465 aaKnown RBP18.6■□□□□ 0.57
TSPAN17-209ENST00000515708 TSG101Q99816 390 aa18.6■□□□□ 0.57
TSPAN17-209ENST00000515708 RBAK-RBAKDNI3L0D1 243 aa18.59■□□□□ 0.57
TSPAN17-209ENST00000515708 hCG_1984214I3L0E3 225 aa18.59■□□□□ 0.57
TSPAN17-209ENST00000515708 ZPR1O75312 459 aa18.59■□□□□ 0.57
TSPAN17-209ENST00000515708 HOXA7P31268 230 aaPredicted RBP18.59■□□□□ 0.57
TSPAN17-209ENST00000515708 TDRD12Q587J7 1177 aaKnown RBP18.59■□□□□ 0.57
TSPAN17-209ENST00000515708 KRT79Q5XKE5 535 aa18.59■□□□□ 0.57
TSPAN17-209ENST00000515708 ARHGAP27Q6ZUM4 889 aa18.59■□□□□ 0.57
TSPAN17-209ENST00000515708 PROM2Q8N271 834 aa18.59■□□□□ 0.57
TSPAN17-209ENST00000515708 ZNF713Q8N859 430 aaPredicted RBP18.59■□□□□ 0.57
TSPAN17-209ENST00000515708 CAVIN3Q969G5 261 aa18.59■□□□□ 0.57
TSPAN17-209ENST00000515708 OPA1O60313 960 aa18.59■□□□□ 0.57
TSPAN17-209ENST00000515708 NOVP48745 357 aa18.59■□□□□ 0.57
TSPAN17-209ENST00000515708 ADCY7P51828 1080 aa18.59■□□□□ 0.57
TSPAN17-209ENST00000515708 NFIXQ14938 502 aa18.59■□□□□ 0.57
TSPAN17-209ENST00000515708 SKIDA1Q1XH10 827 aa18.59■□□□□ 0.57
TSPAN17-209ENST00000515708 TMEM119Q4V9L6 283 aa18.59■□□□□ 0.57
TSPAN17-209ENST00000515708 ZCWPW2Q504Y3 356 aa18.59■□□□□ 0.57
TSPAN17-209ENST00000515708 ZNF804AQ7Z570 1209 aa18.59■□□□□ 0.57
TSPAN17-209ENST00000515708 CERS3Q8IU89 383 aa18.59■□□□□ 0.57
TSPAN17-209ENST00000515708 TEX11Q8IYF3 940 aa18.59■□□□□ 0.57
TSPAN17-209ENST00000515708 COA7Q96BR5 231 aa18.59■□□□□ 0.57
TSPAN17-209ENST00000515708 CAPS2Q9BXY5 557 aa18.59■□□□□ 0.57
TSPAN17-209ENST00000515708 LRRC27Q9C0I9 530 aa18.59■□□□□ 0.57
TSPAN17-209ENST00000515708 TSKSQ9UJT2 592 aa18.59■□□□□ 0.57
TSPAN17-209ENST00000515708 TNRC6CQ9HCJ0 1690 aaKnown RBP18.58■□□□□ 0.57
TSPAN17-209ENST00000515708 EPB41P11171 864 aaKnown RBP18.58■□□□□ 0.56
TSPAN17-209ENST00000515708 ALS2CLQ60I27 953 aa18.58■□□□□ 0.56
TSPAN17-209ENST00000515708 GBP6Q6ZN66 633 aa18.58■□□□□ 0.56
TSPAN17-209ENST00000515708 MYOCDQ8IZQ8 938 aa18.58■□□□□ 0.56
TSPAN17-209ENST00000515708 GPR101Q96P66 508 aaPredicted RBP18.58■□□□□ 0.56
TSPAN17-209ENST00000515708 NLRC4Q9NPP4 1024 aa18.58■□□□□ 0.56
TSPAN17-209ENST00000515708 CEP72Q9P209 647 aa18.58■□□□□ 0.56
TSPAN17-209ENST00000515708 COL4A3BPQ9Y5P4 624 aa18.58■□□□□ 0.56
TSPAN17-209ENST00000515708 FRMPD2Q68DX3 1309 aaPredicted RBP18.58■□□□□ 0.56
TSPAN17-209ENST00000515708 GPR75-ASB3A0A0A6YYF3 556 aa18.57■□□□□ 0.56
TSPAN17-209ENST00000515708 TLR2O60603 784 aa18.57■□□□□ 0.56
TSPAN17-209ENST00000515708 RPS6KA4O75676 772 aa18.57■□□□□ 0.56
TSPAN17-209ENST00000515708 PDHBP11177 359 aa18.57■□□□□ 0.56
TSPAN17-209ENST00000515708 NAP1L1P55209 391 aaKnown RBP18.57■□□□□ 0.56
TSPAN17-209ENST00000515708 FKBP3Q00688 224 aaKnown RBP18.57■□□□□ 0.56
TSPAN17-209ENST00000515708 SLC9C1Q4G0N8 1177 aa18.57■□□□□ 0.56
TSPAN17-209ENST00000515708 CFAP221Q4G0U5 840 aa18.57■□□□□ 0.56
TSPAN17-209ENST00000515708 GLE1Q53GS7 698 aaKnown RBP18.57■□□□□ 0.56
TSPAN17-209ENST00000515708 MS4A14Q96JA4 679 aa18.57■□□□□ 0.56
TSPAN17-209ENST00000515708 GRIN2DO15399 1336 aa18.57■□□□□ 0.56
TSPAN17-209ENST00000515708 NOL4O94818 638 aa18.57■□□□□ 0.56
TSPAN17-209ENST00000515708 TMC4Q7Z404 712 aa18.57■□□□□ 0.56
TSPAN17-209ENST00000515708 PPM1EQ8WY54 764 aa18.57■□□□□ 0.56
TSPAN17-209ENST00000515708 SYN2Q92777 582 aaPredicted RBP18.57■□□□□ 0.56
TSPAN17-209ENST00000515708 DNAJC19Q96DA6 116 aa18.57■□□□□ 0.56
TSPAN17-209ENST00000515708 RNF14Q9UBS8 474 aa18.57■□□□□ 0.56
TSPAN17-209ENST00000515708 HSF2BPO75031 334 aa18.56■□□□□ 0.56
TSPAN17-209ENST00000515708 COASYQ13057 564 aa18.56■□□□□ 0.56
TSPAN17-209ENST00000515708 ECM1Q16610 540 aa18.56■□□□□ 0.56
TSPAN17-209ENST00000515708 FAM83BQ5T0W9 1011 aa18.56■□□□□ 0.56
TSPAN17-209ENST00000515708 EFCAB13Q8IY85 973 aa18.56■□□□□ 0.56
TSPAN17-209ENST00000515708 NUCKS1Q9H1E3 243 aaKnown RBP18.56■□□□□ 0.56
TSPAN17-209ENST00000515708 EHD4Q9H223 541 aa18.56■□□□□ 0.56
TSPAN17-209ENST00000515708 TRAF5O00463 557 aa18.56■□□□□ 0.56
TSPAN17-209ENST00000515708 EIF3HO15372 352 aaKnown RBP eCLIP18.56■□□□□ 0.56
TSPAN17-209ENST00000515708 SERPING1P05155 500 aa18.56■□□□□ 0.56
TSPAN17-209ENST00000515708 CCT5P48643 541 aa18.56■□□□□ 0.56
TSPAN17-209ENST00000515708 NNTQ13423 1086 aa18.56■□□□□ 0.56
TSPAN17-209ENST00000515708 GRAPQ13588 217 aa18.56■□□□□ 0.56
TSPAN17-209ENST00000515708 VPS72Q15906 364 aa18.56■□□□□ 0.56
TSPAN17-209ENST00000515708 CCDC40Q4G0X9 1142 aa18.56■□□□□ 0.56
TSPAN17-209ENST00000515708 TTMPQ5BVD1 217 aa18.56■□□□□ 0.56
TSPAN17-209ENST00000515708 SFMBT2Q5VUG0 894 aa18.56■□□□□ 0.56
TSPAN17-209ENST00000515708 PACS2Q86VP3 889 aa18.56■□□□□ 0.56
TSPAN17-209ENST00000515708 GRAPLQ8TC17 118 aaPredicted RBP18.56■□□□□ 0.56
TSPAN17-209ENST00000515708 ARL8AQ96BM9 186 aa18.56■□□□□ 0.56
TSPAN17-209ENST00000515708 RUFY1Q96T51 708 aa18.56■□□□□ 0.56
TSPAN17-209ENST00000515708 GNPATO15228 680 aa18.55■□□□□ 0.56
TSPAN17-209ENST00000515708 GLI1P08151 1106 aa18.55■□□□□ 0.56
TSPAN17-209ENST00000515708 TNNI2P48788 182 aa18.55■□□□□ 0.56
TSPAN17-209ENST00000515708 TTC31Q49AM3 519 aaPredicted RBP18.55■□□□□ 0.56
TSPAN17-209ENST00000515708 FAM182BQ5T319 152 aa18.55■□□□□ 0.56
TSPAN17-209ENST00000515708 RC3H1Q5TC82 1133 aaKnown RBP18.55■□□□□ 0.56
TSPAN17-209ENST00000515708 EFCC1Q9HA90 598 aa18.55■□□□□ 0.56
TSPAN17-209ENST00000515708 NOP2P46087 812 aaKnown RBP18.55■□□□□ 0.56
TSPAN17-209ENST00000515708 RHBDL3P58872 404 aa18.55■□□□□ 0.56
TSPAN17-209ENST00000515708 GNGT1P63211 74 aa18.55■□□□□ 0.56
TSPAN17-209ENST00000515708 IFT20Q8IY31 132 aa18.55■□□□□ 0.56
TSPAN17-209ENST00000515708 GDF3Q9NR23 364 aa18.55■□□□□ 0.56
TSPAN17-209ENST00000515708 ATP6V0A2Q9Y487 856 aa18.55■□□□□ 0.56
TSPAN17-209ENST00000515708 PALMO75781 387 aa18.54■□□□□ 0.56
TSPAN17-209ENST00000515708 PLCG2P16885 1265 aa18.54■□□□□ 0.56
TSPAN17-209ENST00000515708 POLR2FP61218 127 aaKnown RBP18.54■□□□□ 0.56
TSPAN17-209ENST00000515708 SEPT2Q15019 361 aa18.54■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms