RNA–Protein interactions for RNA: ENST00000514777.1

SMAD5-209, Transcript of SMAD family member 5, humanhuman

TSL 3

Gene SMAD5, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD5-209ENST00000514777 TOP1MTQ969P6 601 aa15.33■□□□□ 0.04
SMAD5-209ENST00000514777 PABPC5Q96DU9 382 aaKnown RBP15.33■□□□□ 0.04
SMAD5-209ENST00000514777 RMDN3Q96TC7 470 aa15.33■□□□□ 0.04
SMAD5-209ENST00000514777 KATNAL1Q9BW62 490 aa15.33■□□□□ 0.04
SMAD5-209ENST00000514777 HELLSQ9NRZ9 838 aa15.33■□□□□ 0.04
SMAD5-209ENST00000514777 CTNNA3Q9UI47 895 aa15.33■□□□□ 0.04
SMAD5-209ENST00000514777 EIF3JO75822 258 aaKnown RBP15.32■□□□□ 0.04
SMAD5-209ENST00000514777 AMHP03971 560 aa15.32■□□□□ 0.04
SMAD5-209ENST00000514777 HSPD1P10809 573 aaKnown RBP15.32■□□□□ 0.04
SMAD5-209ENST00000514777 EIF2AK2P19525 551 aaKnown RBP15.32■□□□□ 0.04
SMAD5-209ENST00000514777 MX1P20591 662 aa15.32■□□□□ 0.04
SMAD5-209ENST00000514777 LTBRP36941 435 aa15.32■□□□□ 0.04
SMAD5-209ENST00000514777 HAND2P61296 217 aa15.32■□□□□ 0.04
SMAD5-209ENST00000514777 GPM6BQ13491 265 aa15.32■□□□□ 0.04
SMAD5-209ENST00000514777 LAMC2Q13753 1193 aa15.32■□□□□ 0.04
SMAD5-209ENST00000514777 CDC37Q16543 378 aaPredicted RBP15.32■□□□□ 0.04
SMAD5-209ENST00000514777 PTPROQ16827 1216 aa15.32■□□□□ 0.04
SMAD5-209ENST00000514777 CSPP1Q1MSJ5 1256 aa15.32■□□□□ 0.04
SMAD5-209ENST00000514777 GPATCH4Q5T3I0 446 aaKnown RBP15.32■□□□□ 0.04
SMAD5-209ENST00000514777 MYSM1Q5VVJ2 828 aa15.32■□□□□ 0.04
SMAD5-209ENST00000514777 SERINC5Q86VE9 423 aa15.32■□□□□ 0.04
SMAD5-209ENST00000514777 ADGRF4Q8IZF3 695 aa15.32■□□□□ 0.04
SMAD5-209ENST00000514777 FAM227BQ96M60 508 aa15.32■□□□□ 0.04
SMAD5-209ENST00000514777 KCNH6Q9H252 994 aa15.32■□□□□ 0.04
SMAD5-209ENST00000514777 PCDHB15Q9Y5E8 787 aa15.32■□□□□ 0.04
SMAD5-209ENST00000514777 ABCB11O95342 1321 aa15.32■□□□□ 0.04
SMAD5-209ENST00000514777 TECTAO75443 2155 aa15.32■□□□□ 0.04
SMAD5-209ENST00000514777 A0A0D9SFI3 127 aa15.31■□□□□ 0.04
SMAD5-209ENST00000514777 LOC101059915A0A1B0GWI6 518 aaPredicted RBP15.31■□□□□ 0.04
SMAD5-209ENST00000514777 RSPH10B2B2RC85 870 aa15.31■□□□□ 0.04
SMAD5-209ENST00000514777 OPLAHO14841 1288 aa15.31■□□□□ 0.04
SMAD5-209ENST00000514777 NR3C2P08235 984 aa15.31■□□□□ 0.04
SMAD5-209ENST00000514777 RSPH10BP0C881 870 aa15.31■□□□□ 0.04
SMAD5-209ENST00000514777 IRS1P35568 1242 aa15.31■□□□□ 0.04
SMAD5-209ENST00000514777 HSDL1Q3SXM5 330 aa15.31■□□□□ 0.04
SMAD5-209ENST00000514777 HFE2Q6ZVN8 426 aa15.31■□□□□ 0.04
SMAD5-209ENST00000514777 DHX37Q8IY37 1157 aaKnown RBP15.31■□□□□ 0.04
SMAD5-209ENST00000514777 TMEM192Q8IY95 271 aa15.31■□□□□ 0.04
SMAD5-209ENST00000514777 SAMD11Q96NU1 681 aa15.31■□□□□ 0.04
SMAD5-209ENST00000514777 ZKSCAN3Q9BRR0 538 aa15.31■□□□□ 0.04
SMAD5-209ENST00000514777 C16orf70Q9BSU1 422 aa15.31■□□□□ 0.04
SMAD5-209ENST00000514777 PXMP2Q9NR77 195 aa15.31■□□□□ 0.04
SMAD5-209ENST00000514777 PRKAG3Q9UGI9 489 aa15.31■□□□□ 0.04
SMAD5-209ENST00000514777 DOCK5Q9H7D0 1870 aa15.31■□□□□ 0.04
SMAD5-209ENST00000514777 SORBS3O60504 671 aa15.3■□□□□ 0.04
SMAD5-209ENST00000514777 PPFIA4O75335 1185 aa15.3■□□□□ 0.04
SMAD5-209ENST00000514777 HOXC8P31273 242 aa15.3■□□□□ 0.04
SMAD5-209ENST00000514777 THPOP40225 353 aa15.3■□□□□ 0.04
SMAD5-209ENST00000514777 SP2Q02086 613 aa15.3■□□□□ 0.04
SMAD5-209ENST00000514777 COL4A6Q14031 1691 aa15.3■□□□□ 0.04
SMAD5-209ENST00000514777 QRICH1Q2TAL8 776 aa15.3■□□□□ 0.04
SMAD5-209ENST00000514777 TIGD5Q53EQ6 642 aa15.3■□□□□ 0.04
SMAD5-209ENST00000514777 CELF3Q5SZQ8 465 aaKnown RBP15.3■□□□□ 0.04
SMAD5-209ENST00000514777 ARHGEF16Q5VV41 709 aa15.3■□□□□ 0.04
SMAD5-209ENST00000514777 EMSYQ7Z589 1322 aa15.3■□□□□ 0.04
SMAD5-209ENST00000514777 ZNF589Q86UQ0 364 aaPredicted RBP15.3■□□□□ 0.04
SMAD5-209ENST00000514777 TBC1D10CQ8IV04 446 aa15.3■□□□□ 0.04
SMAD5-209ENST00000514777 ADHFE1Q8IWW8 467 aa15.3■□□□□ 0.04
SMAD5-209ENST00000514777 NSUN3Q9H649 340 aaKnown RBP15.3■□□□□ 0.04
SMAD5-209ENST00000514777 MRVI1Q9Y6F6 885 aa15.3■□□□□ 0.04
SMAD5-209ENST00000514777 KAT6AQ92794 2004 aa15.29■□□□□ 0.04
SMAD5-209ENST00000514777 ZMYM6O95789 1325 aa15.29■□□□□ 0.04
SMAD5-209ENST00000514777 UPP2O95045 317 aa15.29■□□□□ 0.04
SMAD5-209ENST00000514777 DLX2Q07687 328 aaPredicted RBP15.29■□□□□ 0.04
SMAD5-209ENST00000514777 CTC1Q2NKJ3 1217 aa15.29■□□□□ 0.04
SMAD5-209ENST00000514777 MCMDC2Q4G0Z9 681 aa15.29■□□□□ 0.04
SMAD5-209ENST00000514777 MFSD6Q6ZSS7 791 aa15.29■□□□□ 0.04
SMAD5-209ENST00000514777 EP400NLQ6ZTU2 488 aa15.29■□□□□ 0.04
SMAD5-209ENST00000514777 FBXO11Q86XK2 927 aa15.29■□□□□ 0.04
SMAD5-209ENST00000514777 DGKHQ86XP1 1220 aa15.29■□□□□ 0.04
SMAD5-209ENST00000514777 MCF2L2Q86YR7 1114 aa15.29■□□□□ 0.04
SMAD5-209ENST00000514777 EVI5LQ96CN4 794 aa15.29■□□□□ 0.04
SMAD5-209ENST00000514777 PHOX2BQ99453 314 aa15.29■□□□□ 0.04
SMAD5-209ENST00000514777 BCAS3Q9H6U6 928 aa15.29■□□□□ 0.04
SMAD5-209ENST00000514777 NEDD4P46934 1319 aa15.28■□□□□ 0.04
SMAD5-209ENST00000514777 TREHO43280 583 aa15.28■□□□□ 0.04
SMAD5-209ENST00000514777 LINC00271P0C7V0 271 aa15.28■□□□□ 0.04
SMAD5-209ENST00000514777 HSD17B4P51659 736 aa15.28■□□□□ 0.04
SMAD5-209ENST00000514777 GHRHRQ02643 423 aa15.28■□□□□ 0.04
SMAD5-209ENST00000514777 RPAINQ86UA6 219 aa15.28■□□□□ 0.04
SMAD5-209ENST00000514777 GPKOWQ92917 476 aaPredicted RBP eCLIP15.28■□□□□ 0.04
SMAD5-209ENST00000514777 ZFP91Q96JP5 570 aaPredicted RBP15.28■□□□□ 0.04
SMAD5-209ENST00000514777 YME1L1Q96TA2 773 aa15.28■□□□□ 0.04
SMAD5-209ENST00000514777 RNPEPQ9H4A4 650 aa15.28■□□□□ 0.04
SMAD5-209ENST00000514777 JMJD4Q9H9V9 463 aa15.28■□□□□ 0.04
SMAD5-209ENST00000514777 CLDND1Q9NY35 253 aa15.28■□□□□ 0.04
SMAD5-209ENST00000514777 MRPL11Q9Y3B7 192 aaKnown RBP15.28■□□□□ 0.04
SMAD5-209ENST00000514777 GGPS1O95749 300 aa15.27■□□□□ 0.04
SMAD5-209ENST00000514777 CFBP00751 764 aa15.27■□□□□ 0.04
SMAD5-209ENST00000514777 PCP11498 1178 aaKnown RBP15.27■□□□□ 0.04
SMAD5-209ENST00000514777 MYCLP12524 364 aaPredicted RBP15.27■□□□□ 0.04
SMAD5-209ENST00000514777 HYAL1Q12794 435 aa15.27■□□□□ 0.04
SMAD5-209ENST00000514777 SMAD2Q15796 467 aaKnown RBP15.27■□□□□ 0.04
SMAD5-209ENST00000514777 PNMA1Q8ND90 353 aa15.27■□□□□ 0.04
SMAD5-209ENST00000514777 SEPT8Q92599 483 aa15.27■□□□□ 0.04
SMAD5-209ENST00000514777 ATP6V0A1Q93050 837 aa15.27■□□□□ 0.04
SMAD5-209ENST00000514777 SPATA33Q96N06 139 aa15.27■□□□□ 0.04
SMAD5-209ENST00000514777 PDCD2LQ9BRP1 358 aa15.27■□□□□ 0.04
SMAD5-209ENST00000514777 VAT1LQ9HCJ6 419 aa15.27■□□□□ 0.04
SMAD5-209ENST00000514777 BAZ2BQ9UIF8 2168 aaKnown RBP15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms