RNA–Protein interactions for RNA: ENST00000514455.5

RACK1-233, Transcript of receptor for activated C kinase 1, human

TSL 2 BASIC

Gene RACK1, Length 791 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RACK1-233	ENST00000514455	PLA2G4D	Q86XP0	818 aa		11.24	□□□□□ -0.61
RACK1-233	ENST00000514455	GPRASP2	Q96D09	838 aa		11.24	□□□□□ -0.61
RACK1-233	ENST00000514455	CDHR1	Q96JP9	859 aa		11.24	□□□□□ -0.61
RACK1-233	ENST00000514455	XRN2	Q9H0D6	950 aa	Known RBP eCLIP	11.24	□□□□□ -0.61
RACK1-233	ENST00000514455	RNF208	Q9H0X6	261 aa		11.24	□□□□□ -0.61
RACK1-233	ENST00000514455	UNC93B1	Q9H1C4	597 aa		11.24	□□□□□ -0.61
RACK1-233	ENST00000514455	DDX41	Q9UJV9	622 aa	Known RBP	11.24	□□□□□ -0.61
RACK1-233	ENST00000514455	NOL7	Q9UMY1	257 aa	Known RBP	11.24	□□□□□ -0.61
RACK1-233	ENST00000514455	MRVI1	Q9Y6F6	885 aa		11.24	□□□□□ -0.61
RACK1-233	ENST00000514455	MYH7B	A7E2Y1	1941 aa		11.24	□□□□□ -0.61
RACK1-233	ENST00000514455	C11orf97	A0A1B0GVM6	126 aa	Predicted RBP	11.23	□□□□□ -0.61
RACK1-233	ENST00000514455	NKRF	O15226	690 aa	Known RBP eCLIP	11.23	□□□□□ -0.61
RACK1-233	ENST00000514455	FIBP	O43427	364 aa		11.23	□□□□□ -0.61
RACK1-233	ENST00000514455	CCNT1	O60563	726 aa	Known RBP	11.23	□□□□□ -0.61
RACK1-233	ENST00000514455	MSC	O60682	206 aa		11.23	□□□□□ -0.61
RACK1-233	ENST00000514455	AR	P10275	920 aa		11.23	□□□□□ -0.61
RACK1-233	ENST00000514455	RARB	P10826	455 aa		11.23	□□□□□ -0.61
RACK1-233	ENST00000514455	GCFC2	P16383	781 aa	Known RBP	11.23	□□□□□ -0.61
RACK1-233	ENST00000514455	SMPD1	P17405	629 aa		11.23	□□□□□ -0.61
RACK1-233	ENST00000514455	TRAPPC10	P48553	1259 aa		11.23	□□□□□ -0.61
RACK1-233	ENST00000514455	MTMR1	Q13613	665 aa		11.23	□□□□□ -0.61
RACK1-233	ENST00000514455	LY6K	Q17RY6	165 aa		11.23	□□□□□ -0.61
RACK1-233	ENST00000514455	DUSP28	Q4G0W2	176 aa		11.23	□□□□□ -0.61
RACK1-233	ENST00000514455	PRR16	Q569H4	304 aa		11.23	□□□□□ -0.61
RACK1-233	ENST00000514455	CCDC62	Q6P9F0	684 aa		11.23	□□□□□ -0.61
RACK1-233	ENST00000514455	BRAP	Q7Z569	592 aa		11.23	□□□□□ -0.61
RACK1-233	ENST00000514455	TMEM106C	Q9BVX2	250 aa		11.23	□□□□□ -0.61
RACK1-233	ENST00000514455	ZSCAN16	Q9H4T2	348 aa	Predicted RBP	11.23	□□□□□ -0.61
RACK1-233	ENST00000514455	KCNH7	Q9NS40	1196 aa		11.23	□□□□□ -0.61
RACK1-233	ENST00000514455	DDX20	Q9UHI6	824 aa	Known RBP	11.23	□□□□□ -0.61
RACK1-233	ENST00000514455	IGLV3-22	A0A075B6J6	115 aa		11.22	□□□□□ -0.61
RACK1-233	ENST00000514455	DYNC1LI2	O43237	492 aa	Predicted RBP	11.22	□□□□□ -0.61
RACK1-233	ENST00000514455	ATP9A	O75110	1047 aa		11.22	□□□□□ -0.61
RACK1-233	ENST00000514455	DUSP11	O75319	330 aa	Known RBP	11.22	□□□□□ -0.61
RACK1-233	ENST00000514455	ARIH2	O95376	493 aa		11.22	□□□□□ -0.61
RACK1-233	ENST00000514455	TDP2	O95551	362 aa		11.22	□□□□□ -0.61
RACK1-233	ENST00000514455	ZSCAN22	P10073	491 aa	Predicted RBP	11.22	□□□□□ -0.61
RACK1-233	ENST00000514455	SET	Q01105	290 aa	Predicted RBP	11.22	□□□□□ -0.61
RACK1-233	ENST00000514455	SP2	Q02086	613 aa		11.22	□□□□□ -0.61
RACK1-233	ENST00000514455	SEMA3F	Q13275	785 aa		11.22	□□□□□ -0.61
RACK1-233	ENST00000514455	NEDD9	Q14511	834 aa		11.22	□□□□□ -0.61
RACK1-233	ENST00000514455	ZNF174	Q15697	407 aa		11.22	□□□□□ -0.61
RACK1-233	ENST00000514455		Q4G0T1	1027 aa		11.22	□□□□□ -0.61
RACK1-233	ENST00000514455	RILPL1	Q5EBL4	403 aa		11.22	□□□□□ -0.61
RACK1-233	ENST00000514455	TMEM63B	Q5T3F8	832 aa		11.22	□□□□□ -0.61
RACK1-233	ENST00000514455	FOXD4L5	Q5VV16	416 aa	Predicted RBP	11.22	□□□□□ -0.61
RACK1-233	ENST00000514455	ANO1	Q5XXA6	986 aa		11.22	□□□□□ -0.61
RACK1-233	ENST00000514455	LHX8	Q68G74	356 aa		11.22	□□□□□ -0.61
RACK1-233	ENST00000514455	FOXD4L4	Q8WXT5	416 aa	Predicted RBP	11.22	□□□□□ -0.61
RACK1-233	ENST00000514455	MBOAT7	Q96N66	472 aa		11.22	□□□□□ -0.61
RACK1-233	ENST00000514455	IPO9	Q96P70	1041 aa	Known RBP	11.22	□□□□□ -0.61
RACK1-233	ENST00000514455	DEFB118	Q96PH6	123 aa		11.22	□□□□□ -0.61
RACK1-233	ENST00000514455	SENP7	Q9BQF6	1050 aa		11.22	□□□□□ -0.61
RACK1-233	ENST00000514455	PAK6	Q9NQU5	681 aa	Predicted RBP	11.22	□□□□□ -0.61
RACK1-233	ENST00000514455	DDX25	Q9UHL0	483 aa	Known RBP	11.22	□□□□□ -0.61
RACK1-233	ENST00000514455	GNE	Q9Y223	722 aa	Known RBP	11.22	□□□□□ -0.61
RACK1-233	ENST00000514455		Q9Y3F1	56 aa		11.22	□□□□□ -0.61
RACK1-233	ENST00000514455	KIAA0100	Q14667	2235 aa	Known RBP	11.21	□□□□□ -0.61
RACK1-233	ENST00000514455	KIAA1217	Q5T5P2	1943 aa		11.21	□□□□□ -0.61
RACK1-233	ENST00000514455	MARCH6	O60337	910 aa		11.21	□□□□□ -0.61
RACK1-233	ENST00000514455	SGPL1	O95470	568 aa		11.21	□□□□□ -0.61
RACK1-233	ENST00000514455	GH1	P01241	217 aa		11.21	□□□□□ -0.61
RACK1-233	ENST00000514455	GJB1	P08034	283 aa		11.21	□□□□□ -0.61
RACK1-233	ENST00000514455	ATXN8OS	P0DMR3	200 aa		11.21	□□□□□ -0.61
RACK1-233	ENST00000514455	MCM7	P33993	719 aa		11.21	□□□□□ -0.61
RACK1-233	ENST00000514455	TOB1	P50616	345 aa	Predicted RBP	11.21	□□□□□ -0.61
RACK1-233	ENST00000514455	REST	Q13127	1097 aa		11.21	□□□□□ -0.61
RACK1-233	ENST00000514455	LAMC2	Q13753	1193 aa		11.21	□□□□□ -0.61
RACK1-233	ENST00000514455	PKP1	Q13835	747 aa		11.21	□□□□□ -0.61
RACK1-233	ENST00000514455	TTC38	Q5R3I4	469 aa		11.21	□□□□□ -0.61
RACK1-233	ENST00000514455	CELF3	Q5SZQ8	465 aa	Known RBP	11.21	□□□□□ -0.61
RACK1-233	ENST00000514455	DHX37	Q8IY37	1157 aa	Known RBP	11.21	□□□□□ -0.61
RACK1-233	ENST00000514455	GIMAP8	Q8ND71	665 aa	Predicted RBP	11.21	□□□□□ -0.61
RACK1-233	ENST00000514455	COPS5	Q92905	334 aa		11.21	□□□□□ -0.61
RACK1-233	ENST00000514455	ZNF577	Q9BSK1	485 aa		11.21	□□□□□ -0.61
RACK1-233	ENST00000514455	AP5M1	Q9H0R1	490 aa		11.21	□□□□□ -0.61
RACK1-233	ENST00000514455	MLXIP	Q9HAP2	919 aa		11.21	□□□□□ -0.61
RACK1-233	ENST00000514455	SPC25	Q9HBM1	224 aa		11.21	□□□□□ -0.61
RACK1-233	ENST00000514455	AGO4	Q9HCK5	861 aa	Known RBP	11.21	□□□□□ -0.61
RACK1-233	ENST00000514455	IPO5	O00410	1097 aa	Known RBP	11.2	□□□□□ -0.62
RACK1-233	ENST00000514455	WNT7A	O00755	349 aa		11.2	□□□□□ -0.62
RACK1-233	ENST00000514455	MSH4	O15457	936 aa		11.2	□□□□□ -0.62
RACK1-233	ENST00000514455	ADCY6	O43306	1168 aa		11.2	□□□□□ -0.62
RACK1-233	ENST00000514455	SLC37A4	O43826	429 aa		11.2	□□□□□ -0.62
RACK1-233	ENST00000514455	BAG4	O95429	457 aa	Known RBP	11.2	□□□□□ -0.62
RACK1-233	ENST00000514455	BRD1	O95696	1058 aa		11.2	□□□□□ -0.62
RACK1-233	ENST00000514455	GGPS1	O95749	300 aa		11.2	□□□□□ -0.62
RACK1-233	ENST00000514455	F13A1	P00488	732 aa		11.2	□□□□□ -0.62
RACK1-233	ENST00000514455	TFRC	P02786	760 aa	Known RBP	11.2	□□□□□ -0.62
RACK1-233	ENST00000514455	KCNA2	P16389	499 aa		11.2	□□□□□ -0.62
RACK1-233	ENST00000514455	UBA1	P22314	1058 aa	Known RBP	11.2	□□□□□ -0.62
RACK1-233	ENST00000514455	NUCB2	P80303	420 aa		11.2	□□□□□ -0.62
RACK1-233	ENST00000514455	ORC2	Q13416	577 aa	Predicted RBP	11.2	□□□□□ -0.62
RACK1-233	ENST00000514455	GJC2	Q5T442	439 aa	Predicted RBP	11.2	□□□□□ -0.62
RACK1-233	ENST00000514455	MYSM1	Q5VVJ2	828 aa		11.2	□□□□□ -0.62
RACK1-233	ENST00000514455	CYFIP1	Q7L576	1253 aa		11.2	□□□□□ -0.62
RACK1-233	ENST00000514455	TLK2	Q86UE8	772 aa		11.2	□□□□□ -0.62
RACK1-233	ENST00000514455	TNS4	Q8IZW8	715 aa		11.2	□□□□□ -0.62
RACK1-233	ENST00000514455	ARRDC4	Q8NCT1	418 aa		11.2	□□□□□ -0.62
RACK1-233	ENST00000514455	LENG9	Q96B70	501 aa		11.2	□□□□□ -0.62

Retrieved 100 of 20,778 RNA–protein pairs in 32 ms