RNA–Protein interactions for RNA: ENST00000514267.1

CALCOCO2-223, Transcript of calcium binding and coiled-coil domain 2, human

TSL 2

Gene CALCOCO2, Length 336 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CALCOCO2-223	ENST00000514267	NFIX	Q14938	502 aa		4.81	□□□□□ -1.64
CALCOCO2-223	ENST00000514267	MRM1	Q6IN84	353 aa	Known RBP	4.81	□□□□□ -1.64
CALCOCO2-223	ENST00000514267	CYP4F22	Q6NT55	531 aa		4.81	□□□□□ -1.64
CALCOCO2-223	ENST00000514267	TTLL7	Q6ZT98	887 aa		4.81	□□□□□ -1.64
CALCOCO2-223	ENST00000514267	SPATC1	Q76KD6	591 aa		4.81	□□□□□ -1.64
CALCOCO2-223	ENST00000514267	FRMD5	Q7Z6J6	570 aa		4.81	□□□□□ -1.64
CALCOCO2-223	ENST00000514267	SAPCD2	Q86UD0	394 aa		4.81	□□□□□ -1.64
CALCOCO2-223	ENST00000514267	MIB1	Q86YT6	1006 aa		4.81	□□□□□ -1.64
CALCOCO2-223	ENST00000514267	PPIL6	Q8IXY8	311 aa		4.81	□□□□□ -1.64
CALCOCO2-223	ENST00000514267	TTLL6	Q8N841	843 aa		4.81	□□□□□ -1.64
CALCOCO2-223	ENST00000514267	PHOSPHO1	Q8TCT1	267 aa		4.81	□□□□□ -1.64
CALCOCO2-223	ENST00000514267	BTN2A2	Q8WVV5	523 aa		4.81	□□□□□ -1.64
CALCOCO2-223	ENST00000514267	TMEM169	Q96HH4	297 aa		4.81	□□□□□ -1.64
CALCOCO2-223	ENST00000514267	ZFYVE21	Q9BQ24	234 aa		4.81	□□□□□ -1.64
CALCOCO2-223	ENST00000514267	SPATA9	Q9BWV2	254 aa		4.81	□□□□□ -1.64
CALCOCO2-223	ENST00000514267	MARCH2	Q9P0N8	246 aa		4.81	□□□□□ -1.64
CALCOCO2-223	ENST00000514267	CNOT11	Q9UKZ1	510 aa	Known RBP	4.81	□□□□□ -1.64
CALCOCO2-223	ENST00000514267	ZNF652	Q9Y2D9	606 aa		4.81	□□□□□ -1.64
CALCOCO2-223	ENST00000514267	PTCH2	Q9Y6C5	1203 aa		4.81	□□□□□ -1.64
CALCOCO2-223	ENST00000514267	C22orf46	C9J442	243 aa		4.8	□□□□□ -1.64
CALCOCO2-223	ENST00000514267	TRIM13	O60858	407 aa		4.8	□□□□□ -1.64
CALCOCO2-223	ENST00000514267	RAB11FIP3	O75154	756 aa		4.8	□□□□□ -1.64
CALCOCO2-223	ENST00000514267	APP	P05067	770 aa		4.8	□□□□□ -1.64
CALCOCO2-223	ENST00000514267	PML	P29590	882 aa		4.8	□□□□□ -1.64
CALCOCO2-223	ENST00000514267	KCNC1	P48547	511 aa		4.8	□□□□□ -1.64
CALCOCO2-223	ENST00000514267	HTRA3	P83110	453 aa		4.8	□□□□□ -1.64
CALCOCO2-223	ENST00000514267	SLC10A6	Q3KNW5	377 aa		4.8	□□□□□ -1.64
CALCOCO2-223	ENST00000514267	ZBTB38	Q8NAP3	1195 aa	Predicted RBP	4.8	□□□□□ -1.64
CALCOCO2-223	ENST00000514267	CXorf38	Q8TB03	319 aa		4.8	□□□□□ -1.64
CALCOCO2-223	ENST00000514267	PLEKHO2	Q8TD55	490 aa		4.8	□□□□□ -1.64
CALCOCO2-223	ENST00000514267	FRS2	Q8WU20	508 aa		4.8	□□□□□ -1.64
CALCOCO2-223	ENST00000514267	RELT	Q969Z4	430 aa		4.8	□□□□□ -1.64
CALCOCO2-223	ENST00000514267	TRMT2B	Q96GJ1	504 aa	Known RBP	4.8	□□□□□ -1.64
CALCOCO2-223	ENST00000514267	BORCS6	Q96GS4	357 aa		4.8	□□□□□ -1.64
CALCOCO2-223	ENST00000514267	TEPSIN	Q96N21	525 aa		4.8	□□□□□ -1.64
CALCOCO2-223	ENST00000514267	YIPF4	Q9BSR8	244 aa		4.8	□□□□□ -1.64
CALCOCO2-223	ENST00000514267	EPB41L1	Q9H4G0	881 aa		4.8	□□□□□ -1.64
CALCOCO2-223	ENST00000514267	GPRC5C	Q9NQ84	441 aa		4.8	□□□□□ -1.64
CALCOCO2-223	ENST00000514267	NTM	Q9P121	344 aa		4.8	□□□□□ -1.64
CALCOCO2-223	ENST00000514267	PFDN2	Q9UHV9	154 aa		4.8	□□□□□ -1.64
CALCOCO2-223	ENST00000514267	KRIT1	O00522	736 aa		4.79	□□□□□ -1.64
CALCOCO2-223	ENST00000514267	RFPL3	O75679	317 aa		4.79	□□□□□ -1.64
CALCOCO2-223	ENST00000514267	DGKI	O75912	1065 aa		4.79	□□□□□ -1.64
CALCOCO2-223	ENST00000514267	NTRK1	P04629	796 aa		4.79	□□□□□ -1.64
CALCOCO2-223	ENST00000514267	SYN1	P17600	705 aa		4.79	□□□□□ -1.64
CALCOCO2-223	ENST00000514267	HOXA5	P20719	270 aa		4.79	□□□□□ -1.64
CALCOCO2-223	ENST00000514267	ECI1	P42126	302 aa		4.79	□□□□□ -1.64
CALCOCO2-223	ENST00000514267	MASP1	P48740	699 aa		4.79	□□□□□ -1.64
CALCOCO2-223	ENST00000514267	NCKAP1L	P55160	1127 aa		4.79	□□□□□ -1.64
CALCOCO2-223	ENST00000514267	LSAMP	Q13449	338 aa		4.79	□□□□□ -1.64
CALCOCO2-223	ENST00000514267	LIPI	Q6XZB0	460 aa		4.79	□□□□□ -1.64
CALCOCO2-223	ENST00000514267	KRT26	Q7Z3Y9	468 aa		4.79	□□□□□ -1.64
CALCOCO2-223	ENST00000514267	TRIM48	Q8IWZ4	208 aa		4.79	□□□□□ -1.64
CALCOCO2-223	ENST00000514267	FNIP1	Q8TF40	1166 aa		4.79	□□□□□ -1.64
CALCOCO2-223	ENST00000514267	EPB41L4A	Q9HCS5	686 aa	Predicted RBP	4.79	□□□□□ -1.64
CALCOCO2-223	ENST00000514267	GPR27	Q9NS67	375 aa		4.79	□□□□□ -1.64
CALCOCO2-223	ENST00000514267	TYW1	Q9NV66	732 aa	Known RBP	4.79	□□□□□ -1.64
CALCOCO2-223	ENST00000514267	NPFFR2	Q9Y5X5	522 aa		4.79	□□□□□ -1.64
CALCOCO2-223	ENST00000514267	HGS	O14964	777 aa	Predicted RBP	4.78	□□□□□ -1.64
CALCOCO2-223	ENST00000514267	ADCY3	O60266	1144 aa		4.78	□□□□□ -1.64
CALCOCO2-223	ENST00000514267	FGFR1	P11362	822 aa		4.78	□□□□□ -1.64
CALCOCO2-223	ENST00000514267	NAT1	P18440	290 aa		4.78	□□□□□ -1.64
CALCOCO2-223	ENST00000514267	LIMS1	P48059	325 aa		4.78	□□□□□ -1.64
CALCOCO2-223	ENST00000514267	GJA9	P57773	515 aa		4.78	□□□□□ -1.64
CALCOCO2-223	ENST00000514267	TKFC	Q3LXA3	575 aa		4.78	□□□□□ -1.64
CALCOCO2-223	ENST00000514267	DALRD3	Q5D0E6	543 aa	Known RBP	4.78	□□□□□ -1.64
CALCOCO2-223	ENST00000514267	EMC4	Q5J8M3	183 aa		4.78	□□□□□ -1.64
CALCOCO2-223	ENST00000514267	CEP68	Q76N32	757 aa		4.78	□□□□□ -1.64
CALCOCO2-223	ENST00000514267	FAM124A	Q86V42	546 aa		4.78	□□□□□ -1.64
CALCOCO2-223	ENST00000514267	FAM126B	Q8IXS8	530 aa		4.78	□□□□□ -1.64
CALCOCO2-223	ENST00000514267	PANK1	Q8TE04	598 aa		4.78	□□□□□ -1.64
CALCOCO2-223	ENST00000514267	AARSD1	Q9BTE6	412 aa	Known RBP	4.78	□□□□□ -1.64
CALCOCO2-223	ENST00000514267	USP40	Q9NVE5	1235 aa		4.78	□□□□□ -1.64
CALCOCO2-223	ENST00000514267	ASMTL	O95671	621 aa		4.77	□□□□□ -1.65
CALCOCO2-223	ENST00000514267	FAM153B	P0C7A2	387 aa		4.77	□□□□□ -1.65
CALCOCO2-223	ENST00000514267	ATF2	P15336	505 aa		4.77	□□□□□ -1.65
CALCOCO2-223	ENST00000514267	NKX3-2	P78367	333 aa		4.77	□□□□□ -1.65
CALCOCO2-223	ENST00000514267	AMPD3	Q01432	767 aa		4.77	□□□□□ -1.65
CALCOCO2-223	ENST00000514267	KIZ	Q2M2Z5	673 aa		4.77	□□□□□ -1.65
CALCOCO2-223	ENST00000514267	SLC35F1	Q5T1Q4	408 aa		4.77	□□□□□ -1.65
CALCOCO2-223	ENST00000514267	TEX2	Q8IWB9	1127 aa		4.77	□□□□□ -1.65
CALCOCO2-223	ENST00000514267	LINC00482	Q8N8I6	264 aa		4.77	□□□□□ -1.65
CALCOCO2-223	ENST00000514267	SMARCC2	Q8TAQ2	1214 aa		4.77	□□□□□ -1.65
CALCOCO2-223	ENST00000514267	DCAF4	Q8WV16	495 aa		4.77	□□□□□ -1.65
CALCOCO2-223	ENST00000514267	NINJ1	Q92982	152 aa		4.77	□□□□□ -1.65
CALCOCO2-223	ENST00000514267	MFSD3	Q96ES6	412 aa		4.77	□□□□□ -1.65
CALCOCO2-223	ENST00000514267	IPO9	Q96P70	1041 aa	Known RBP	4.77	□□□□□ -1.65
CALCOCO2-223	ENST00000514267	TMEM209	Q96SK2	561 aa		4.77	□□□□□ -1.65
CALCOCO2-223	ENST00000514267	NCAN	O14594	1321 aa		4.76	□□□□□ -1.65
CALCOCO2-223	ENST00000514267	TRAV20	A0A0B4J274	112 aa		4.76	□□□□□ -1.65
CALCOCO2-223	ENST00000514267		B8ZZF3	427 aa		4.76	□□□□□ -1.65
CALCOCO2-223	ENST00000514267	FFAR3	O14843	346 aa		4.76	□□□□□ -1.65
CALCOCO2-223	ENST00000514267	SARS	P49591	514 aa	Known RBP	4.76	□□□□□ -1.65
CALCOCO2-223	ENST00000514267	SLURP1	P55000	103 aa		4.76	□□□□□ -1.65
CALCOCO2-223	ENST00000514267	PPP2R2A	P63151	447 aa		4.76	□□□□□ -1.65
CALCOCO2-223	ENST00000514267	KIAA2012	Q0VF49	1180 aa		4.76	□□□□□ -1.65
CALCOCO2-223	ENST00000514267	INF2	Q27J81	1249 aa		4.76	□□□□□ -1.65
CALCOCO2-223	ENST00000514267	VWA3B	Q502W6	1294 aa		4.76	□□□□□ -1.65
CALCOCO2-223	ENST00000514267	TM4SF20	Q53R12	229 aa		4.76	□□□□□ -1.65
CALCOCO2-223	ENST00000514267	FAM26F	Q5R3K3	315 aa		4.76	□□□□□ -1.65

Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms