RNA–Protein interactions for RNA: ENST00000514231.1

PDE4D-221, Transcript of phosphodiesterase 4D, humanhuman

TSL 3

Gene PDE4D, Length 733 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-221ENST00000514231 SPATA6Q9NWH7 488 aaPredicted RBP8.14□□□□□ -1.11
PDE4D-221ENST00000514231 NTRK3Q16288 839 aa8.13□□□□□ -1.11
PDE4D-221ENST00000514231 LBX2Q6XYB7 198 aa8.13□□□□□ -1.11
PDE4D-221ENST00000514231 DPH6Q7L8W6 267 aa8.13□□□□□ -1.11
PDE4D-221ENST00000514231 FEZF2Q8TBJ5 459 aa8.13□□□□□ -1.11
PDE4D-221ENST00000514231 ZBTB8AQ96BR9 441 aa8.13□□□□□ -1.11
PDE4D-221ENST00000514231 GORASP1Q9BQQ3 440 aa8.13□□□□□ -1.11
PDE4D-221ENST00000514231 C11orf84Q9BUA3 381 aaPredicted RBP8.13□□□□□ -1.11
PDE4D-221ENST00000514231 SMOC1Q9H4F8 434 aa8.13□□□□□ -1.11
PDE4D-221ENST00000514231 A0A0G2JLL6 359 aaPredicted RBP8.12□□□□□ -1.11
PDE4D-221ENST00000514231 KRTAP9-7A8MTY7 169 aa8.12□□□□□ -1.11
PDE4D-221ENST00000514231 MAFKO60675 156 aa8.12□□□□□ -1.11
PDE4D-221ENST00000514231 IFRD2Q12894 506 aaPredicted RBP8.12□□□□□ -1.11
PDE4D-221ENST00000514231 MTERF2Q49AM1 385 aa8.12□□□□□ -1.11
PDE4D-221ENST00000514231 STYK1Q6J9G0 422 aa8.12□□□□□ -1.11
PDE4D-221ENST00000514231 TTLL7Q6ZT98 887 aa8.12□□□□□ -1.11
PDE4D-221ENST00000514231 LRP10Q7Z4F1 713 aa8.12□□□□□ -1.11
PDE4D-221ENST00000514231 SCUBE1Q8IWY4 988 aa8.12□□□□□ -1.11
PDE4D-221ENST00000514231 ADGRG2Q8IZP9 1017 aa8.12□□□□□ -1.11
PDE4D-221ENST00000514231 CARFQ8N187 725 aa8.12□□□□□ -1.11
PDE4D-221ENST00000514231 FAM26EQ8N5C1 309 aa8.12□□□□□ -1.11
PDE4D-221ENST00000514231 KYQ8NBH2 561 aa8.12□□□□□ -1.11
PDE4D-221ENST00000514231 SYT8Q8NBV8 401 aa8.12□□□□□ -1.11
PDE4D-221ENST00000514231 PHOSPHO1Q8TCT1 267 aa8.12□□□□□ -1.11
PDE4D-221ENST00000514231 RELTQ969Z4 430 aa8.12□□□□□ -1.11
PDE4D-221ENST00000514231 RTEL1Q9NZ71 1219 aa8.12□□□□□ -1.11
PDE4D-221ENST00000514231 A0A1B0GTL3 188 aa8.11□□□□□ -1.11
PDE4D-221ENST00000514231 TCRBV5S2A0A599 114 aa8.11□□□□□ -1.11
PDE4D-221ENST00000514231 SMARCA5O60264 1052 aaPredicted RBP8.11□□□□□ -1.11
PDE4D-221ENST00000514231 CR1LQ2VPA4 569 aa8.11□□□□□ -1.11
PDE4D-221ENST00000514231 YOD1Q5VVQ6 348 aaPredicted RBP8.11□□□□□ -1.11
PDE4D-221ENST00000514231 CYP4F22Q6NT55 531 aa8.11□□□□□ -1.11
PDE4D-221ENST00000514231 KCNT2Q6UVM3 1135 aa8.11□□□□□ -1.11
PDE4D-221ENST00000514231 FRMD5Q7Z6J6 570 aa8.11□□□□□ -1.11
PDE4D-221ENST00000514231 IFNL3Q8IZI9 196 aa8.11□□□□□ -1.11
PDE4D-221ENST00000514231 TTLL6Q8N841 843 aa8.11□□□□□ -1.11
PDE4D-221ENST00000514231 JAM3Q9BX67 310 aa8.11□□□□□ -1.11
PDE4D-221ENST00000514231 SLC6A20Q9NP91 592 aa8.11□□□□□ -1.11
PDE4D-221ENST00000514231 NTMQ9P121 344 aa8.11□□□□□ -1.11
PDE4D-221ENST00000514231 PCDHB4Q9Y5E5 795 aa8.11□□□□□ -1.11
PDE4D-221ENST00000514231 KRIT1O00522 736 aa8.1□□□□□ -1.11
PDE4D-221ENST00000514231 ADCY3O60266 1144 aa8.1□□□□□ -1.11
PDE4D-221ENST00000514231 SARSP49591 514 aaKnown RBP8.1□□□□□ -1.11
PDE4D-221ENST00000514231 GPR85P60893 370 aa8.1□□□□□ -1.11
PDE4D-221ENST00000514231 NKX3-2P78367 333 aa8.1□□□□□ -1.11
PDE4D-221ENST00000514231 KIZQ2M2Z5 673 aa8.1□□□□□ -1.11
PDE4D-221ENST00000514231 SOGA3Q5TF21 947 aa8.1□□□□□ -1.11
PDE4D-221ENST00000514231 ZBTB38Q8NAP3 1195 aaPredicted RBP8.1□□□□□ -1.11
PDE4D-221ENST00000514231 ARRDC4Q8NCT1 418 aa8.1□□□□□ -1.11
PDE4D-221ENST00000514231 TOE1Q96GM8 510 aaKnown RBP8.1□□□□□ -1.11
PDE4D-221ENST00000514231 YIPF4Q9BSR8 244 aa8.1□□□□□ -1.11
PDE4D-221ENST00000514231 SMAD4Q13485 552 aaKnown RBP8.09□□□□□ -1.11
PDE4D-221ENST00000514231 SERINC3Q13530 473 aa8.09□□□□□ -1.11
PDE4D-221ENST00000514231 NFIXQ14938 502 aa8.09□□□□□ -1.11
PDE4D-221ENST00000514231 LONRF2Q1L5Z9 754 aa8.09□□□□□ -1.11
PDE4D-221ENST00000514231 TRIM48Q8IWZ4 208 aa8.09□□□□□ -1.11
PDE4D-221ENST00000514231 ZDHHC14Q8IZN3 488 aa8.09□□□□□ -1.11
PDE4D-221ENST00000514231 PUM2Q8TB72 1066 aaKnown RBP eCLIP8.09□□□□□ -1.11
PDE4D-221ENST00000514231 SYT3Q9BQG1 590 aa8.09□□□□□ -1.11
PDE4D-221ENST00000514231 SPATA25Q9BR10 227 aa8.09□□□□□ -1.11
PDE4D-221ENST00000514231 DTLQ9NZJ0 730 aa8.09□□□□□ -1.11
PDE4D-221ENST00000514231 HSPBP1Q9NZL4 362 aa8.09□□□□□ -1.11
PDE4D-221ENST00000514231 MYOTQ9UBF9 498 aa8.09□□□□□ -1.11
PDE4D-221ENST00000514231 BLACEA4D250 179 aa8.08□□□□□ -1.12
PDE4D-221ENST00000514231 CCDC85CA6NKD9 419 aa8.08□□□□□ -1.12
PDE4D-221ENST00000514231 RPL13P26373 211 aaKnown RBP8.08□□□□□ -1.12
PDE4D-221ENST00000514231 THBS2P35442 1172 aa8.08□□□□□ -1.12
PDE4D-221ENST00000514231 STAT5AP42229 794 aa8.08□□□□□ -1.12
PDE4D-221ENST00000514231 ITGA1P56199 1179 aa8.08□□□□□ -1.12
PDE4D-221ENST00000514231 SSRP1Q08945 709 aaKnown RBP8.08□□□□□ -1.12
PDE4D-221ENST00000514231 OTOP3Q7RTS5 596 aa8.08□□□□□ -1.12
PDE4D-221ENST00000514231 PPARGC1AQ9UBK2 798 aaKnown RBP8.08□□□□□ -1.12
PDE4D-221ENST00000514231 ASH2LQ9UBL3 628 aa8.08□□□□□ -1.12
PDE4D-221ENST00000514231 PFDN2Q9UHV9 154 aa8.08□□□□□ -1.12
PDE4D-221ENST00000514231 FOXD2O60548 495 aaPredicted RBP8.07□□□□□ -1.12
PDE4D-221ENST00000514231 GRK2P25098 689 aa8.07□□□□□ -1.12
PDE4D-221ENST00000514231 GRK3P35626 688 aa8.07□□□□□ -1.12
PDE4D-221ENST00000514231 SPIRE1Q08AE8 756 aa8.07□□□□□ -1.12
PDE4D-221ENST00000514231 SF3A1Q15459 793 aaKnown RBP8.07□□□□□ -1.12
PDE4D-221ENST00000514231 CXorf38Q8TB03 319 aa8.07□□□□□ -1.12
PDE4D-221ENST00000514231 PIP4K2CQ8TBX8 421 aa8.07□□□□□ -1.12
PDE4D-221ENST00000514231 TEPSINQ96N21 525 aa8.07□□□□□ -1.12
PDE4D-221ENST00000514231 IPO9Q96P70 1041 aaKnown RBP8.07□□□□□ -1.12
PDE4D-221ENST00000514231 CDC6Q99741 560 aa8.07□□□□□ -1.12
PDE4D-221ENST00000514231 PDGFDQ9GZP0 370 aaPredicted RBP8.07□□□□□ -1.12
PDE4D-221ENST00000514231 TRBV23-1A0A0A0MS06 115 aa8.06□□□□□ -1.12
PDE4D-221ENST00000514231 NOBOXO60393 691 aa8.06□□□□□ -1.12
PDE4D-221ENST00000514231 LRG1P02750 347 aa8.06□□□□□ -1.12
PDE4D-221ENST00000514231 ZFYVE27Q5T4F4 411 aa8.06□□□□□ -1.12
PDE4D-221ENST00000514231 NT5DC1Q5TFE4 455 aa8.06□□□□□ -1.12
PDE4D-221ENST00000514231 TEPPQ6URK8 271 aa8.06□□□□□ -1.12
PDE4D-221ENST00000514231 STK32CQ86UX6 486 aa8.06□□□□□ -1.12
PDE4D-221ENST00000514231 PTPRN2Q92932 1015 aa8.06□□□□□ -1.12
PDE4D-221ENST00000514231 MKL1Q969V6 931 aa8.06□□□□□ -1.12
PDE4D-221ENST00000514231 NUB1Q9Y5A7 615 aa8.06□□□□□ -1.12
PDE4D-221ENST00000514231 ASXL2Q76L83 1435 aa8.05□□□□□ -1.12
PDE4D-221ENST00000514231 B8ZZF3 427 aa8.05□□□□□ -1.12
PDE4D-221ENST00000514231 FAM47E-STBD1D6RA91 191 aa8.05□□□□□ -1.12
PDE4D-221ENST00000514231 PRRG2O14669 202 aa8.05□□□□□ -1.12
PDE4D-221ENST00000514231 DIAPH1O60610 1272 aaKnown RBP8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms