RNA–Protein interactions for RNA: ENST00000513769.5

TPM3-221, Transcript of tropomyosin 3, humanhuman

TSL 3

Gene TPM3, Length 539 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-221ENST00000513769 ADAMTS3O15072 1205 aa11.16□□□□□ -0.62
TPM3-221ENST00000513769 POLR2DO15514 142 aaKnown RBP11.16□□□□□ -0.62
TPM3-221ENST00000513769 MAFGO15525 162 aa11.16□□□□□ -0.62
TPM3-221ENST00000513769 FLOT1O75955 427 aa11.16□□□□□ -0.62
TPM3-221ENST00000513769 OR52Z1P0C646 297 aa11.16□□□□□ -0.62
TPM3-221ENST00000513769 XRCC6P12956 609 aaKnown RBP eCLIP11.16□□□□□ -0.62
TPM3-221ENST00000513769 VCAM1P19320 739 aa11.16□□□□□ -0.62
TPM3-221ENST00000513769 SREBF1P36956 1147 aa11.16□□□□□ -0.62
TPM3-221ENST00000513769 CTCFP49711 727 aaPredicted RBP11.16□□□□□ -0.62
TPM3-221ENST00000513769 VEGFBP49765 207 aa11.16□□□□□ -0.62
TPM3-221ENST00000513769 PABPC4Q13310 644 aaKnown RBP eCLIP11.16□□□□□ -0.622e-26■■■□□ 17.2
TPM3-221ENST00000513769 MTMR2Q13614 643 aa11.16□□□□□ -0.62
TPM3-221ENST00000513769 TMEM266Q2M3C6 531 aa11.16□□□□□ -0.62
TPM3-221ENST00000513769 NOM1Q5C9Z4 860 aaKnown RBP11.16□□□□□ -0.62
TPM3-221ENST00000513769 XRRA1Q6P2D8 792 aa11.16□□□□□ -0.62
TPM3-221ENST00000513769 CEP57L1Q8IYX8 460 aa11.16□□□□□ -0.62
TPM3-221ENST00000513769 IGSF22Q8N9C0 903 aa11.16□□□□□ -0.62
TPM3-221ENST00000513769 RASGRP4Q8TDF6 673 aa11.16□□□□□ -0.62
TPM3-221ENST00000513769 LRRC27Q9C0I9 530 aa11.16□□□□□ -0.62
TPM3-221ENST00000513769 RPAP3Q9H6T3 665 aaPredicted RBP11.16□□□□□ -0.62
TPM3-221ENST00000513769 MAGEF1Q9HAY2 307 aa11.16□□□□□ -0.62
TPM3-221ENST00000513769 PCDHA12Q9UN75 941 aa11.16□□□□□ -0.62
TPM3-221ENST00000513769 ZNF536O15090 1300 aa11.15□□□□□ -0.62
TPM3-221ENST00000513769 PASKQ96RG2 1323 aa11.15□□□□□ -0.62
TPM3-221ENST00000513769 ACTN4O43707 911 aaKnown RBP11.15□□□□□ -0.62
TPM3-221ENST00000513769 EDIL3O43854 480 aa11.15□□□□□ -0.62
TPM3-221ENST00000513769 SMC2O95347 1197 aa11.15□□□□□ -0.62
TPM3-221ENST00000513769 GGCXP38435 758 aa11.15□□□□□ -0.62
TPM3-221ENST00000513769 SARSP49591 514 aaKnown RBP11.15□□□□□ -0.62
TPM3-221ENST00000513769 HSD17B4P51659 736 aa11.15□□□□□ -0.62
TPM3-221ENST00000513769 AMPD3Q01432 767 aa11.15□□□□□ -0.62
TPM3-221ENST00000513769 TYRO3Q06418 890 aa11.15□□□□□ -0.62
TPM3-221ENST00000513769 VGLL4Q14135 290 aa11.15□□□□□ -0.62
TPM3-221ENST00000513769 IL17AQ16552 155 aa11.15□□□□□ -0.62
TPM3-221ENST00000513769 CALCRLQ16602 461 aa11.15□□□□□ -0.62
TPM3-221ENST00000513769 USP17L6PQ6QN14 398 aa11.15□□□□□ -0.62
TPM3-221ENST00000513769 LBX2Q6XYB7 198 aa11.15□□□□□ -0.62
TPM3-221ENST00000513769 SPATA20Q8TB22 786 aa11.15□□□□□ -0.62
TPM3-221ENST00000513769 CDCA5Q96FF9 252 aa11.15□□□□□ -0.62
TPM3-221ENST00000513769 GSDMAQ96QA5 445 aa11.15□□□□□ -0.62
TPM3-221ENST00000513769 BPIFA3Q9BQP9 254 aa11.15□□□□□ -0.62
TPM3-221ENST00000513769 ANO3Q9BYT9 981 aa11.15□□□□□ -0.62
TPM3-221ENST00000513769 TANGO6Q9C0B7 1094 aa11.15□□□□□ -0.62
TPM3-221ENST00000513769 TMEM260Q9NX78 707 aa11.15□□□□□ -0.62
TPM3-221ENST00000513769 DDX25Q9UHL0 483 aaKnown RBP11.15□□□□□ -0.62
TPM3-221ENST00000513769 CCPG1Q9ULG6 757 aa11.15□□□□□ -0.62
TPM3-221ENST00000513769 KCNH4Q9UQ05 1017 aa11.15□□□□□ -0.62
TPM3-221ENST00000513769 SNCAIPQ9Y6H5 919 aa11.15□□□□□ -0.62
TPM3-221ENST00000513769 SPDYE5A6NIY4 337 aa11.14□□□□□ -0.63
TPM3-221ENST00000513769 OPLAHO14841 1288 aa11.14□□□□□ -0.63
TPM3-221ENST00000513769 TLL1O43897 1013 aa11.14□□□□□ -0.63
TPM3-221ENST00000513769 MARCH6O60337 910 aa11.14□□□□□ -0.63
TPM3-221ENST00000513769 ARHGAP4P98171 946 aa11.14□□□□□ -0.63
TPM3-221ENST00000513769 PPIL2Q13356 520 aa11.14□□□□□ -0.63
TPM3-221ENST00000513769 ZYXQ15942 572 aaKnown RBP11.14□□□□□ -0.63
TPM3-221ENST00000513769 USH1GQ495M9 461 aa11.14□□□□□ -0.63
TPM3-221ENST00000513769 RRAGBQ5VZM2 374 aa11.14□□□□□ -0.63
TPM3-221ENST00000513769 NIPA1Q7RTP0 329 aa11.14□□□□□ -0.63
TPM3-221ENST00000513769 SH3RF1Q7Z6J0 888 aa11.14□□□□□ -0.63
TPM3-221ENST00000513769 FAM200AQ8TCP9 573 aa11.14□□□□□ -0.63
TPM3-221ENST00000513769 SYMPKQ92797 1274 aaKnown RBP11.14□□□□□ -0.63
TPM3-221ENST00000513769 SLC10A4Q96EP9 437 aa11.14□□□□□ -0.63
TPM3-221ENST00000513769 CALML4Q96GE6 196 aa11.14□□□□□ -0.63
TPM3-221ENST00000513769 EPSTI1Q96J88 318 aa11.14□□□□□ -0.63
TPM3-221ENST00000513769 RBSNQ9H1K0 784 aa11.14□□□□□ -0.63
TPM3-221ENST00000513769 A0A0G2JLL6 359 aaPredicted RBP11.13□□□□□ -0.63
TPM3-221ENST00000513769 SMTNL1A8MU46 457 aa11.13□□□□□ -0.63
TPM3-221ENST00000513769 ADM5C9JUS6 153 aa11.13□□□□□ -0.63
TPM3-221ENST00000513769 WNT7AO00755 349 aa11.13□□□□□ -0.63
TPM3-221ENST00000513769 CFBP00751 764 aa11.13□□□□□ -0.63
TPM3-221ENST00000513769 BCRP11274 1271 aa11.13□□□□□ -0.63
TPM3-221ENST00000513769 MUTP22033 750 aa11.13□□□□□ -0.63
TPM3-221ENST00000513769 COPB2P35606 906 aa11.13□□□□□ -0.63
TPM3-221ENST00000513769 TECP42680 631 aa11.13□□□□□ -0.63
TPM3-221ENST00000513769 LBX1P52954 281 aa11.13□□□□□ -0.63
TPM3-221ENST00000513769 HMGCS2P54868 508 aa11.13□□□□□ -0.63
TPM3-221ENST00000513769 NLRP12P59046 1061 aa11.13□□□□□ -0.63
TPM3-221ENST00000513769 GRIN1Q05586 938 aa11.13□□□□□ -0.63
TPM3-221ENST00000513769 STX1AQ16623 288 aa11.13□□□□□ -0.63
TPM3-221ENST00000513769 DEFB115Q30KQ5 88 aa11.13□□□□□ -0.63
TPM3-221ENST00000513769 TPRNQ4KMQ1 711 aa11.13□□□□□ -0.63
TPM3-221ENST00000513769 PRRT2Q7Z6L0 340 aaPredicted RBP11.13□□□□□ -0.63
TPM3-221ENST00000513769 CKAP2LQ8IYA6 745 aa11.13□□□□□ -0.63
TPM3-221ENST00000513769 MLKLQ8NB16 471 aa11.13□□□□□ -0.63
TPM3-221ENST00000513769 CHST13Q8NET6 341 aa11.13□□□□□ -0.63
TPM3-221ENST00000513769 GTF3C2Q8WUA4 911 aaPredicted RBP11.13□□□□□ -0.63
TPM3-221ENST00000513769 NT5C3AQ9H0P0 336 aa11.13□□□□□ -0.63
TPM3-221ENST00000513769 TMEM60Q9H2L4 133 aa11.13□□□□□ -0.63
TPM3-221ENST00000513769 TTC12Q9H892 705 aaPredicted RBP11.13□□□□□ -0.63
TPM3-221ENST00000513769 KCNMB3Q9NPA1 279 aa11.13□□□□□ -0.63
TPM3-221ENST00000513769 FBXO28Q9NVF7 368 aa11.13□□□□□ -0.63
TPM3-221ENST00000513769 LRWD1Q9UFC0 647 aa11.13□□□□□ -0.63
TPM3-221ENST00000513769 DACH1Q9UI36 760 aa11.13□□□□□ -0.63
TPM3-221ENST00000513769 ATAD5Q96QE3 1844 aa11.12□□□□□ -0.63
TPM3-221ENST00000513769 MEIS1O00470 390 aa11.12□□□□□ -0.63
TPM3-221ENST00000513769 IRF6O14896 467 aa11.12□□□□□ -0.63
TPM3-221ENST00000513769 STAM2O75886 525 aa11.12□□□□□ -0.63
TPM3-221ENST00000513769 ZNF76P36508 570 aa11.12□□□□□ -0.63
TPM3-221ENST00000513769 STAT3P40763 770 aa11.12□□□□□ -0.63
TPM3-221ENST00000513769 TXKP42681 527 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms