RNA–Protein interactions for RNA: ENST00000513761.5

CLCN3-209, Transcript of chloride voltage-gated channel 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CLCN3, Length 6,692 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-209ENST00000513761 EIF3HO15372 352 aaKnown RBP eCLIP8.46□□□□□ -1.06
CLCN3-209ENST00000513761 MMEP08473 750 aa8.46□□□□□ -1.06
CLCN3-209ENST00000513761 CORO7P57737 925 aa8.46□□□□□ -1.06
CLCN3-209ENST00000513761 TRAF3IP1Q8TDR0 691 aaPredicted RBP8.46□□□□□ -1.06
CLCN3-209ENST00000513761 IGDCC4Q8TDY8 1250 aa8.46□□□□□ -1.06
CLCN3-209ENST00000513761 THOC1Q96FV9 657 aaKnown RBP8.46□□□□□ -1.06
CLCN3-209ENST00000513761 PASKQ96RG2 1323 aa8.45□□□□□ -1.06
CLCN3-209ENST00000513761 POC1B-GALNT4F8VUJ3 575 aa8.45□□□□□ -1.06
CLCN3-209ENST00000513761 TFRCP02786 760 aaKnown RBP8.45□□□□□ -1.06
CLCN3-209ENST00000513761 HDLBPQ00341 1268 aaKnown RBP8.45□□□□□ -1.06
CLCN3-209ENST00000513761 LIN9Q5TKA1 542 aa8.45□□□□□ -1.06
CLCN3-209ENST00000513761 TRIM65Q6PJ69 517 aa8.45□□□□□ -1.06
CLCN3-209ENST00000513761 PPM1KQ8N3J5 372 aa8.45□□□□□ -1.06
CLCN3-209ENST00000513761 PROCA1Q8NCQ7 364 aaPredicted RBP8.45□□□□□ -1.06
CLCN3-209ENST00000513761 ZMYND12Q9H0C1 365 aa8.45□□□□□ -1.06
CLCN3-209ENST00000513761 CNOT10Q9H9A5 744 aaKnown RBP8.45□□□□□ -1.06
CLCN3-209ENST00000513761 METTL14Q9HCE5 456 aaKnown RBP8.45□□□□□ -1.06
CLCN3-209ENST00000513761 DPYDQ12882 1025 aa8.45□□□□□ -1.06
CLCN3-209ENST00000513761 CUL1Q13616 776 aa8.45□□□□□ -1.06
CLCN3-209ENST00000513761 AP1ARQ63HQ0 302 aa8.45□□□□□ -1.06
CLCN3-209ENST00000513761 PPP1R21Q6ZMI0 780 aa8.45□□□□□ -1.06
CLCN3-209ENST00000513761 ARMC9Q7Z3E5 817 aa8.45□□□□□ -1.06
CLCN3-209ENST00000513761 HNRNPLLQ8WVV9 542 aaKnown RBP8.45□□□□□ -1.06
CLCN3-209ENST00000513761 ATP6V1G3Q96LB4 118 aa8.45□□□□□ -1.06
CLCN3-209ENST00000513761 GCNT4Q9P109 453 aa8.45□□□□□ -1.06
CLCN3-209ENST00000513761 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.45□□□□□ -1.06
CLCN3-209ENST00000513761 CPDO75976 1380 aa8.45□□□□□ -1.06
CLCN3-209ENST00000513761 HSPA1LP34931 641 aa8.45□□□□□ -1.06
CLCN3-209ENST00000513761 DR1Q01658 176 aa8.45□□□□□ -1.06
CLCN3-209ENST00000513761 TXNRD1Q16881 649 aa8.45□□□□□ -1.06
CLCN3-209ENST00000513761 HVCN1Q96D96 273 aa8.45□□□□□ -1.06
CLCN3-209ENST00000513761 KAZALD1Q96I82 304 aa8.45□□□□□ -1.06
CLCN3-209ENST00000513761 KLC4Q9NSK0 619 aa8.45□□□□□ -1.06
CLCN3-209ENST00000513761 EMILIN3Q9NT22 766 aa8.45□□□□□ -1.06
CLCN3-209ENST00000513761 L1RE1Q9UN81 338 aa8.45□□□□□ -1.06
CLCN3-209ENST00000513761 SNX24Q9Y343 169 aa8.45□□□□□ -1.06
CLCN3-209ENST00000513761 MEFVO15553 781 aaPredicted RBP8.45□□□□□ -1.06
CLCN3-209ENST00000513761 SMIM24O75264 130 aa8.45□□□□□ -1.06
CLCN3-209ENST00000513761 ECM2O94769 699 aaPredicted RBP8.45□□□□□ -1.06
CLCN3-209ENST00000513761 CYP4F22Q6NT55 531 aa8.45□□□□□ -1.06
CLCN3-209ENST00000513761 FAM178BQ8IXR5 827 aa8.45□□□□□ -1.06
CLCN3-209ENST00000513761 GLT8D2Q9H1C3 349 aa8.45□□□□□ -1.06
CLCN3-209ENST00000513761 STK17AQ9UEE5 414 aa8.45□□□□□ -1.06
CLCN3-209ENST00000513761 PXDNLA1KZ92 1463 aa8.45□□□□□ -1.06
CLCN3-209ENST00000513761 POTEMA6NI47 508 aa8.45□□□□□ -1.06
CLCN3-209ENST00000513761 RASGRF2O14827 1237 aa8.45□□□□□ -1.06
CLCN3-209ENST00000513761 TROVE2P10155 538 aaKnown RBP eCLIP8.45□□□□□ -1.06
CLCN3-209ENST00000513761 ATF2P15336 505 aa8.45□□□□□ -1.06
CLCN3-209ENST00000513761 KLK7P49862 253 aa8.45□□□□□ -1.06
CLCN3-209ENST00000513761 TRIP13Q15645 432 aaPredicted RBP8.45□□□□□ -1.06
CLCN3-209ENST00000513761 WDR78Q5VTH9 848 aa8.45□□□□□ -1.06
CLCN3-209ENST00000513761 TSNARE1Q96NA8 513 aa8.45□□□□□ -1.06
CLCN3-209ENST00000513761 GBP5Q96PP8 586 aa8.45□□□□□ -1.06
CLCN3-209ENST00000513761 KANSL2Q9H9L4 492 aa8.45□□□□□ -1.06
CLCN3-209ENST00000513761 MLXIPLQ9NP71 852 aa8.45□□□□□ -1.06
CLCN3-209ENST00000513761 SPATS2LQ9NUQ6 558 aaKnown RBP8.45□□□□□ -1.06
CLCN3-209ENST00000513761 BAG2O95816 211 aa8.44□□□□□ -1.06
CLCN3-209ENST00000513761 FERP16591 822 aa8.44□□□□□ -1.06
CLCN3-209ENST00000513761 ERVK-24P63145 666 aa8.44□□□□□ -1.06
CLCN3-209ENST00000513761 ATP2C1P98194 919 aaPredicted RBP8.44□□□□□ -1.06
CLCN3-209ENST00000513761 LRRC63Q05C16 580 aa8.44□□□□□ -1.06
CLCN3-209ENST00000513761 TAF11Q15544 211 aa8.44□□□□□ -1.06
CLCN3-209ENST00000513761 CFAP157Q5JU67 520 aa8.44□□□□□ -1.06
CLCN3-209ENST00000513761 NUGGCQ68CJ6 796 aa8.44□□□□□ -1.06
CLCN3-209ENST00000513761 ANKRD40Q6AI12 368 aa8.44□□□□□ -1.06
CLCN3-209ENST00000513761 CEP128Q6ZU80 1094 aa8.44□□□□□ -1.06
CLCN3-209ENST00000513761 CCDC127Q96BQ5 260 aa8.44□□□□□ -1.06
CLCN3-209ENST00000513761 NCAPGQ9BPX3 1015 aa8.44□□□□□ -1.06
CLCN3-209ENST00000513761 LCMT1Q9UIC8 334 aa8.44□□□□□ -1.06
CLCN3-209ENST00000513761 MYO1FO00160 1098 aa8.44□□□□□ -1.06
CLCN3-209ENST00000513761 PPP1R37O75864 691 aa8.44□□□□□ -1.06
CLCN3-209ENST00000513761 ACSL3O95573 720 aa8.44□□□□□ -1.06
CLCN3-209ENST00000513761 LMNB1P20700 586 aa8.44□□□□□ -1.06
CLCN3-209ENST00000513761 SLC16A2P36021 539 aa8.44□□□□□ -1.06
CLCN3-209ENST00000513761 BTDP43251 543 aa8.44□□□□□ -1.06
CLCN3-209ENST00000513761 COL9A3Q14050 684 aaPredicted RBP8.44□□□□□ -1.06
CLCN3-209ENST00000513761 UBE2SQ16763 222 aa8.44□□□□□ -1.06
CLCN3-209ENST00000513761 PFKFB3Q16875 520 aaPredicted RBP8.44□□□□□ -1.06
CLCN3-209ENST00000513761 TBC1D10BQ4KMP7 808 aaPredicted RBP8.44□□□□□ -1.06
CLCN3-209ENST00000513761 MFSD14BQ5SR56 506 aa8.44□□□□□ -1.06
CLCN3-209ENST00000513761 DCUN1D2Q6PH85 259 aa8.44□□□□□ -1.06
CLCN3-209ENST00000513761 PSMD1Q99460 953 aa8.44□□□□□ -1.06
CLCN3-209ENST00000513761 MAK16Q9BXY0 300 aaKnown RBP8.44□□□□□ -1.06
CLCN3-209ENST00000513761 TXNDC16Q9P2K2 825 aa8.44□□□□□ -1.06
CLCN3-209ENST00000513761 USP31Q70CQ4 1352 aa8.44□□□□□ -1.06
CLCN3-209ENST00000513761 A0A1W2PQC6 194 aa8.44□□□□□ -1.06
CLCN3-209ENST00000513761 LRRD1A4D1F6 860 aa8.44□□□□□ -1.06
CLCN3-209ENST00000513761 NBPF26B4DH59 902 aa8.44□□□□□ -1.06
CLCN3-209ENST00000513761 SEC24CP53992 1094 aa8.44□□□□□ -1.06
CLCN3-209ENST00000513761 PTPAQ15257 358 aa8.44□□□□□ -1.06
CLCN3-209ENST00000513761 KAZNQ674X7 775 aa8.44□□□□□ -1.06
CLCN3-209ENST00000513761 NBPF10Q6P3W6 841 aaKnown RBP8.44□□□□□ -1.06
CLCN3-209ENST00000513761 NBPF15Q8N660 670 aa8.44□□□□□ -1.06
CLCN3-209ENST00000513761 CNBD1Q8NA66 436 aa8.44□□□□□ -1.06
CLCN3-209ENST00000513761 GGA1Q9UJY5 639 aa8.44□□□□□ -1.06
CLCN3-209ENST00000513761 SMTNP53814 917 aa8.44□□□□□ -1.06
CLCN3-209ENST00000513761 PARP9Q8IXQ6 854 aa8.44□□□□□ -1.06
CLCN3-209ENST00000513761 LRRC8CQ8TDW0 803 aa8.44□□□□□ -1.06
CLCN3-209ENST00000513761 RILPQ96NA2 401 aa8.44□□□□□ -1.06
CLCN3-209ENST00000513761 RUNDC3BQ96NL0 473 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms