RNA–Protein interactions for RNA: ENST00000513538.1

TCOF1-212, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 5

Gene TCOF1, Length 701 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-212ENST00000513538 PPTC7Q8NI37 304 aa11.26□□□□□ -0.61
TCOF1-212ENST00000513538 GPKOWQ92917 476 aaPredicted RBP eCLIP11.26□□□□□ -0.61
TCOF1-212ENST00000513538 RILPL2Q969X0 211 aa11.26□□□□□ -0.61
TCOF1-212ENST00000513538 TGS1Q96RS0 853 aaKnown RBP11.26□□□□□ -0.61
TCOF1-212ENST00000513538 IWS1Q96ST2 819 aa11.26□□□□□ -0.61
TCOF1-212ENST00000513538 ZSCAN10Q96SZ4 725 aaPredicted RBP11.26□□□□□ -0.61
TCOF1-212ENST00000513538 RAD9AQ99638 391 aa11.26□□□□□ -0.61
TCOF1-212ENST00000513538 C17orf80Q9BSJ5 609 aa11.26□□□□□ -0.61
TCOF1-212ENST00000513538 ZBED2Q9BTP6 218 aa11.26□□□□□ -0.61
TCOF1-212ENST00000513538 RNF41Q9H4P4 317 aaPredicted RBP11.26□□□□□ -0.61
TCOF1-212ENST00000513538 UBE2ZQ9H832 354 aaPredicted RBP11.26□□□□□ -0.61
TCOF1-212ENST00000513538 LMCD1Q9NZU5 365 aa11.26□□□□□ -0.61
TCOF1-212ENST00000513538 MRVI1Q9Y6F6 885 aa11.26□□□□□ -0.61
TCOF1-212ENST00000513538 MYO7AQ13402 2215 aa11.25□□□□□ -0.61
TCOF1-212ENST00000513538 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.25□□□□□ -0.61
TCOF1-212ENST00000513538 EIF3JO75822 258 aaKnown RBP11.25□□□□□ -0.61
TCOF1-212ENST00000513538 PARNO95453 639 aaKnown RBP11.25□□□□□ -0.61
TCOF1-212ENST00000513538 ATXN8OSP0DMR3 200 aa11.25□□□□□ -0.61
TCOF1-212ENST00000513538 IL9P15248 144 aa11.25□□□□□ -0.61
TCOF1-212ENST00000513538 HSD17B4P51659 736 aa11.25□□□□□ -0.61
TCOF1-212ENST00000513538 SP2Q02086 613 aa11.25□□□□□ -0.61
TCOF1-212ENST00000513538 LAMC2Q13753 1193 aa11.25□□□□□ -0.61
TCOF1-212ENST00000513538 HSDL1Q3SXM5 330 aa11.25□□□□□ -0.61
TCOF1-212ENST00000513538 TMEM31Q5JXX7 168 aa11.25□□□□□ -0.61
TCOF1-212ENST00000513538 MYSM1Q5VVJ2 828 aa11.25□□□□□ -0.61
TCOF1-212ENST00000513538 MCF2L2Q86YR7 1114 aa11.25□□□□□ -0.61
TCOF1-212ENST00000513538 DBF4BQ8NFT6 615 aa11.25□□□□□ -0.61
TCOF1-212ENST00000513538 MTMR8Q96EF0 704 aa11.25□□□□□ -0.61
TCOF1-212ENST00000513538 ZFP91Q96JP5 570 aaPredicted RBP11.25□□□□□ -0.61
TCOF1-212ENST00000513538 PDCD2LQ9BRP1 358 aa11.25□□□□□ -0.61
TCOF1-212ENST00000513538 C16orf70Q9BSU1 422 aa11.25□□□□□ -0.61
TCOF1-212ENST00000513538 MAF1Q9H063 256 aa11.25□□□□□ -0.61
TCOF1-212ENST00000513538 IL25Q9H293 177 aa11.25□□□□□ -0.61
TCOF1-212ENST00000513538 BCAS3Q9H6U6 928 aa11.25□□□□□ -0.61
TCOF1-212ENST00000513538 KAT14Q9H8E8 782 aa11.25□□□□□ -0.61
TCOF1-212ENST00000513538 VAT1LQ9HCJ6 419 aa11.25□□□□□ -0.61
TCOF1-212ENST00000513538 ZSWIM5Q9P217 1185 aa11.25□□□□□ -0.61
TCOF1-212ENST00000513538 MRPL11Q9Y3B7 192 aaKnown RBP11.25□□□□□ -0.61
TCOF1-212ENST00000513538 RALGAPA2Q2PPJ7 1873 aa11.25□□□□□ -0.61
TCOF1-212ENST00000513538 COL4A6Q14031 1691 aa11.24□□□□□ -0.61
TCOF1-212ENST00000513538 PI4K2BG5E9Z4 385 aa11.24□□□□□ -0.61
TCOF1-212ENST00000513538 ZNF213O14771 459 aa11.24□□□□□ -0.61
TCOF1-212ENST00000513538 DHX16O60231 1041 aaKnown RBP11.24□□□□□ -0.61
TCOF1-212ENST00000513538 GPR37L1O60883 481 aa11.24□□□□□ -0.61
TCOF1-212ENST00000513538 LGR5O75473 907 aa11.24□□□□□ -0.61
TCOF1-212ENST00000513538 CFBP00751 764 aa11.24□□□□□ -0.61
TCOF1-212ENST00000513538 PARP1P09874 1014 aaKnown RBP11.24□□□□□ -0.61
TCOF1-212ENST00000513538 UBA1P22314 1058 aaKnown RBP11.24□□□□□ -0.61
TCOF1-212ENST00000513538 HOXA13P31271 388 aaPredicted RBP11.24□□□□□ -0.61
TCOF1-212ENST00000513538 HOXC8P31273 242 aa11.24□□□□□ -0.61
TCOF1-212ENST00000513538 HTRA4P83105 476 aaPredicted RBP11.24□□□□□ -0.61
TCOF1-212ENST00000513538 IKBKEQ14164 716 aa11.24□□□□□ -0.61
TCOF1-212ENST00000513538 LEXMQ3ZCV2 418 aa11.24□□□□□ -0.61
TCOF1-212ENST00000513538 CELF3Q5SZQ8 465 aaKnown RBP11.24□□□□□ -0.61
TCOF1-212ENST00000513538 CWC27Q6UX04 472 aaKnown RBP11.24□□□□□ -0.61
TCOF1-212ENST00000513538 SERINC5Q86VE9 423 aa11.24□□□□□ -0.61
TCOF1-212ENST00000513538 IQCA1Q86XH1 822 aa11.24□□□□□ -0.61
TCOF1-212ENST00000513538 GADD45GIP1Q8TAE8 222 aaPredicted RBP11.24□□□□□ -0.61
TCOF1-212ENST00000513538 SP7Q8TDD2 431 aaPredicted RBP11.24□□□□□ -0.61
TCOF1-212ENST00000513538 SPATA33Q96N06 139 aa11.24□□□□□ -0.61
TCOF1-212ENST00000513538 KATNAL1Q9BW62 490 aa11.24□□□□□ -0.61
TCOF1-212ENST00000513538 RNF39Q9H2S5 420 aa11.24□□□□□ -0.61
TCOF1-212ENST00000513538 ZBTB47Q9UFB7 747 aaPredicted RBP11.24□□□□□ -0.61
TCOF1-212ENST00000513538 MUC6Q6W4X9 2439 aa11.24□□□□□ -0.61
TCOF1-212ENST00000513538 GGPS1O95749 300 aa11.23□□□□□ -0.61
TCOF1-212ENST00000513538 MYCLP12524 364 aaPredicted RBP11.23□□□□□ -0.61
TCOF1-212ENST00000513538 KCNA5P22460 613 aa11.23□□□□□ -0.61
TCOF1-212ENST00000513538 THPOP40225 353 aa11.23□□□□□ -0.61
TCOF1-212ENST00000513538 PGM5Q15124 567 aa11.23□□□□□ -0.61
TCOF1-212ENST00000513538 SEC23AQ15436 765 aa11.23□□□□□ -0.61
TCOF1-212ENST00000513538 PLEKHG4Q58EX7 1191 aa11.23□□□□□ -0.61
TCOF1-212ENST00000513538 STOX1Q6ZVD7 989 aa11.23□□□□□ -0.61
TCOF1-212ENST00000513538 PLEKHM2Q8IWE5 1019 aa11.23□□□□□ -0.61
TCOF1-212ENST00000513538 FAM178BQ8IXR5 827 aa11.23□□□□□ -0.61
TCOF1-212ENST00000513538 DHX37Q8IY37 1157 aaKnown RBP11.23□□□□□ -0.61
TCOF1-212ENST00000513538 AMNQ9BXJ7 453 aa11.23□□□□□ -0.61
TCOF1-212ENST00000513538 HCN4Q9Y3Q4 1203 aa11.23□□□□□ -0.61
TCOF1-212ENST00000513538 TELO2Q9Y4R8 837 aa11.23□□□□□ -0.61
TCOF1-212ENST00000513538 ARIH1Q9Y4X5 557 aaPredicted RBP11.23□□□□□ -0.61
TCOF1-212ENST00000513538 EFCAB14O75071 495 aa11.22□□□□□ -0.61
TCOF1-212ENST00000513538 PPFIA4O75335 1185 aa11.22□□□□□ -0.61
TCOF1-212ENST00000513538 CCDC178Q5BJE1 867 aa11.22□□□□□ -0.61
TCOF1-212ENST00000513538 B4GALNT3Q6L9W6 998 aa11.22□□□□□ -0.61
TCOF1-212ENST00000513538 CYB5R4Q7L1T6 521 aa11.22□□□□□ -0.61
TCOF1-212ENST00000513538 VSIG10LQ86VR7 867 aa11.22□□□□□ -0.61
TCOF1-212ENST00000513538 SMC5Q8IY18 1101 aa11.22□□□□□ -0.61
TCOF1-212ENST00000513538 MYOCDQ8IZQ8 938 aa11.22□□□□□ -0.61
TCOF1-212ENST00000513538 FBXO22Q8NEZ5 403 aa11.22□□□□□ -0.61
TCOF1-212ENST00000513538 SENP2Q9HC62 589 aa11.22□□□□□ -0.61
TCOF1-212ENST00000513538 MAD2L2Q9UI95 211 aa11.22□□□□□ -0.61
TCOF1-212ENST00000513538 EMSYQ7Z589 1322 aa11.21□□□□□ -0.61
TCOF1-212ENST00000513538 LOC101059915A0A1B0GWI6 518 aaPredicted RBP11.21□□□□□ -0.61
TCOF1-212ENST00000513538 PALM3A6NDB9 673 aaPredicted RBP11.21□□□□□ -0.61
TCOF1-212ENST00000513538 RSPH10B2B2RC85 870 aa11.21□□□□□ -0.61
TCOF1-212ENST00000513538 KLRF2D3W0D1 207 aa11.21□□□□□ -0.61
TCOF1-212ENST00000513538 ZBTB5O15062 677 aa11.21□□□□□ -0.61
TCOF1-212ENST00000513538 TREHO43280 583 aa11.21□□□□□ -0.61
TCOF1-212ENST00000513538 LGALS2P05162 132 aa11.21□□□□□ -0.61
TCOF1-212ENST00000513538 CTSHP09668 335 aa11.21□□□□□ -0.61
TCOF1-212ENST00000513538 RSPH10BP0C881 870 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms