RNA–Protein interactions for RNA: ENST00000513153.5

LINC01088-210, Transcript of long intergenic non-protein coding RNA 1088, humanhuman

TSL 3

Gene LINC01088, Length 695 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01088-210ENST00000513153 NOP56O00567 594 aaKnown RBP6.25□□□□□ -1.41
LINC01088-210ENST00000513153 NAT2P11245 290 aa6.25□□□□□ -1.41
LINC01088-210ENST00000513153 ATF4P18848 351 aaPredicted RBP6.25□□□□□ -1.41
LINC01088-210ENST00000513153 FPR2P25090 351 aa6.25□□□□□ -1.41
LINC01088-210ENST00000513153 ITGA1P56199 1179 aa6.25□□□□□ -1.41
LINC01088-210ENST00000513153 SPDYAQ5MJ70 313 aa6.25□□□□□ -1.41
LINC01088-210ENST00000513153 NLRP10Q86W26 655 aa6.25□□□□□ -1.41
LINC01088-210ENST00000513153 RIOX2Q8IUF8 465 aa6.25□□□□□ -1.41
LINC01088-210ENST00000513153 CRACR2BQ8N4Y2 399 aaPredicted RBP6.25□□□□□ -1.41
LINC01088-210ENST00000513153 DNERQ8NFT8 737 aa6.25□□□□□ -1.41
LINC01088-210ENST00000513153 SEC14L1Q92503 715 aa6.25□□□□□ -1.41
LINC01088-210ENST00000513153 ZNF341Q9BYN7 854 aa6.25□□□□□ -1.41
LINC01088-210ENST00000513153 TMEFF2Q9UIK5 374 aaPredicted RBP6.25□□□□□ -1.41
LINC01088-210ENST00000513153 TCAF1Q9Y4C2 921 aa6.25□□□□□ -1.41
LINC01088-210ENST00000513153 C22orf46C9J442 243 aa6.24□□□□□ -1.41
LINC01088-210ENST00000513153 MUSKO15146 869 aa6.24□□□□□ -1.41
LINC01088-210ENST00000513153 TBX1O43435 398 aa6.24□□□□□ -1.41
LINC01088-210ENST00000513153 SELENOPP49908 381 aa6.24□□□□□ -1.41
LINC01088-210ENST00000513153 SMN1Q16637 294 aaKnown RBP6.24□□□□□ -1.41
LINC01088-210ENST00000513153 CD300LDQ6UXZ3 194 aa6.24□□□□□ -1.41
LINC01088-210ENST00000513153 STK32CQ86UX6 486 aa6.24□□□□□ -1.41
LINC01088-210ENST00000513153 VPS37DQ86XT2 251 aa6.24□□□□□ -1.41
LINC01088-210ENST00000513153 FAM126BQ8IXS8 530 aa6.24□□□□□ -1.41
LINC01088-210ENST00000513153 TTLL6Q8N841 843 aa6.24□□□□□ -1.41
LINC01088-210ENST00000513153 AP5M1Q9H0R1 490 aa6.24□□□□□ -1.41
LINC01088-210ENST00000513153 X6R8D5 127 aa6.24□□□□□ -1.41
LINC01088-210ENST00000513153 CR1LQ2VPA4 569 aa6.23□□□□□ -1.41
LINC01088-210ENST00000513153 IGDCC4Q8TDY8 1250 aa6.23□□□□□ -1.41
LINC01088-210ENST00000513153 BTG4Q9NY30 223 aa6.23□□□□□ -1.41
LINC01088-210ENST00000513153 FBXL7Q9UJT9 491 aa6.23□□□□□ -1.41
LINC01088-210ENST00000513153 C9orf118A6NHY6 69 aa6.22□□□□□ -1.41
LINC01088-210ENST00000513153 ADAM9Q13443 819 aa6.22□□□□□ -1.41
LINC01088-210ENST00000513153 R3HDM1Q15032 1099 aaKnown RBP6.22□□□□□ -1.41
LINC01088-210ENST00000513153 TESK1Q15569 626 aa6.22□□□□□ -1.41
LINC01088-210ENST00000513153 MROH9Q5TGP6 573 aa6.22□□□□□ -1.41
LINC01088-210ENST00000513153 MILR1Q7Z6M3 343 aa6.22□□□□□ -1.41
LINC01088-210ENST00000513153 KREMEN2Q8NCW0 462 aa6.22□□□□□ -1.41
LINC01088-210ENST00000513153 BTN2A2Q8WVV5 523 aa6.22□□□□□ -1.41
LINC01088-210ENST00000513153 PPP1R14AQ96A00 147 aa6.22□□□□□ -1.41
LINC01088-210ENST00000513153 CAPN10Q9HC96 672 aa6.22□□□□□ -1.41
LINC01088-210ENST00000513153 SMAD7O15105 426 aaKnown RBP6.21□□□□□ -1.42
LINC01088-210ENST00000513153 SCG5P05408 212 aa6.21□□□□□ -1.42
LINC01088-210ENST00000513153 STAT5AP42229 794 aa6.21□□□□□ -1.42
LINC01088-210ENST00000513153 INHBEP58166 350 aa6.21□□□□□ -1.42
LINC01088-210ENST00000513153 E4F1Q66K89 784 aaPredicted RBP6.21□□□□□ -1.42
LINC01088-210ENST00000513153 IQCEQ6IPM2 695 aa6.21□□□□□ -1.42
LINC01088-210ENST00000513153 ZNF575Q86XF7 245 aa6.21□□□□□ -1.42
LINC01088-210ENST00000513153 WDR26Q9H7D7 661 aa6.21□□□□□ -1.42
LINC01088-210ENST00000513153 JADE2Q9NQC1 790 aa6.21□□□□□ -1.42
LINC01088-210ENST00000513153 TIMM13Q9Y5L4 95 aaPredicted RBP6.21□□□□□ -1.42
LINC01088-210ENST00000513153 MRVI1Q9Y6F6 885 aa6.21□□□□□ -1.42
LINC01088-210ENST00000513153 NPIPB8E9PQR5 432 aa6.2□□□□□ -1.42
LINC01088-210ENST00000513153 CYP1A1P04798 512 aaPredicted RBP6.2□□□□□ -1.42
LINC01088-210ENST00000513153 ZNF28P17035 718 aa6.2□□□□□ -1.42
LINC01088-210ENST00000513153 BCL6P41182 706 aa6.2□□□□□ -1.42
LINC01088-210ENST00000513153 RPL11P62913 178 aaKnown RBP6.2□□□□□ -1.42
LINC01088-210ENST00000513153 CEP68Q76N32 757 aa6.2□□□□□ -1.42
LINC01088-210ENST00000513153 ZC3H18Q86VM9 953 aaKnown RBP6.2□□□□□ -1.42
LINC01088-210ENST00000513153 WWC2-AS2Q96NR7 200 aa6.2□□□□□ -1.42
LINC01088-210ENST00000513153 SEMA4AQ9H3S1 761 aa6.2□□□□□ -1.42
LINC01088-210ENST00000513153 ZNF652Q9Y2D9 606 aa6.2□□□□□ -1.42
LINC01088-210ENST00000513153 CAPNS1P04632 268 aa6.19□□□□□ -1.42
LINC01088-210ENST00000513153 SSBP05455 408 aaKnown RBP eCLIP6.19□□□□□ -1.42
LINC01088-210ENST00000513153 ITGAVP06756 1048 aa6.19□□□□□ -1.42
LINC01088-210ENST00000513153 ERCC5P28715 1186 aaPredicted RBP6.19□□□□□ -1.42
LINC01088-210ENST00000513153 PPP2CBP62714 309 aa6.19□□□□□ -1.42
LINC01088-210ENST00000513153 PPP2CAP67775 309 aa6.19□□□□□ -1.42
LINC01088-210ENST00000513153 SF1Q15637 639 aaKnown RBP6.19□□□□□ -1.42
LINC01088-210ENST00000513153 TNNI3KQ59H18 835 aa6.19□□□□□ -1.42
LINC01088-210ENST00000513153 ACBD5Q5T8D3 534 aaPredicted RBP6.19□□□□□ -1.42
LINC01088-210ENST00000513153 PRAMEF18Q5VWM3 479 aa6.19□□□□□ -1.42
LINC01088-210ENST00000513153 C6orf15Q6UXA7 325 aaPredicted RBP6.19□□□□□ -1.42
LINC01088-210ENST00000513153 ARHGEF18Q6ZSZ5 1173 aa6.19□□□□□ -1.42
LINC01088-210ENST00000513153 ZNF227Q86WZ6 799 aa6.19□□□□□ -1.42
LINC01088-210ENST00000513153 FAM178BQ8IXR5 827 aa6.19□□□□□ -1.42
LINC01088-210ENST00000513153 RCBTB1Q8NDN9 531 aa6.19□□□□□ -1.42
LINC01088-210ENST00000513153 DIO2Q92813 273 aa6.19□□□□□ -1.42
LINC01088-210ENST00000513153 CHFRQ96EP1 664 aa6.19□□□□□ -1.42
LINC01088-210ENST00000513153 ACTR10Q9NZ32 417 aa6.19□□□□□ -1.42
LINC01088-210ENST00000513153 TESMINQ9Y4I5 508 aa6.19□□□□□ -1.42
LINC01088-210ENST00000513153 WDR33Q9C0J8 1336 aaKnown RBP6.19□□□□□ -1.42
LINC01088-210ENST00000513153 B2RBV5 119 aa6.18□□□□□ -1.42
LINC01088-210ENST00000513153 ZNF623O75123 536 aa6.18□□□□□ -1.42
LINC01088-210ENST00000513153 HOXC12P31275 282 aa6.18□□□□□ -1.42
LINC01088-210ENST00000513153 EPHB4P54760 987 aa6.18□□□□□ -1.42
LINC01088-210ENST00000513153 KCNAB2Q13303 367 aa6.18□□□□□ -1.42
LINC01088-210ENST00000513153 GNL2Q13823 731 aaKnown RBP6.18□□□□□ -1.42
LINC01088-210ENST00000513153 PRSS53Q2L4Q9 553 aa6.18□□□□□ -1.42
LINC01088-210ENST00000513153 SV2CQ496J9 727 aa6.18□□□□□ -1.42
LINC01088-210ENST00000513153 LARP1BQ659C4 914 aaKnown RBP6.18□□□□□ -1.42
LINC01088-210ENST00000513153 DENND5AQ6IQ26 1287 aa6.18□□□□□ -1.42
LINC01088-210ENST00000513153 MBD6Q96DN6 1003 aa6.18□□□□□ -1.42
LINC01088-210ENST00000513153 TRMT2BQ96GJ1 504 aaKnown RBP6.18□□□□□ -1.42
LINC01088-210ENST00000513153 C1orf159Q96HA4 380 aa6.18□□□□□ -1.42
LINC01088-210ENST00000513153 WASF3Q9UPY6 502 aa6.18□□□□□ -1.42
LINC01088-210ENST00000513153 PATE3B3GLJ2 98 aa6.17□□□□□ -1.42
LINC01088-210ENST00000513153 MEFVO15553 781 aaPredicted RBP6.17□□□□□ -1.42
LINC01088-210ENST00000513153 TADA3O75528 432 aa6.17□□□□□ -1.42
LINC01088-210ENST00000513153 LCP1P13796 627 aa6.17□□□□□ -1.42
LINC01088-210ENST00000513153 ETFBP38117 255 aa6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms