RNA–Protein interactions for RNA: ENST00000512683.1

VEGFA-216, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 475 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-216ENST00000512683 SCN10AQ9Y5Y9 1956 aa14.57□□□□□ -0.08
VEGFA-216ENST00000512683 PNMA6FA0A0J9YX94 578 aa14.57□□□□□ -0.08
VEGFA-216ENST00000512683 NBNO60934 754 aa14.57□□□□□ -0.08
VEGFA-216ENST00000512683 RGS20O76081 388 aa14.57□□□□□ -0.08
VEGFA-216ENST00000512683 GNAT1P11488 350 aa14.57□□□□□ -0.08
VEGFA-216ENST00000512683 SMARCA1P28370 1054 aa14.57□□□□□ -0.08
VEGFA-216ENST00000512683 CCND2P30279 289 aa14.57□□□□□ -0.08
VEGFA-216ENST00000512683 ERVK-21P61565 698 aa14.57□□□□□ -0.08
VEGFA-216ENST00000512683 SART3Q15020 963 aaKnown RBP14.57□□□□□ -0.08
VEGFA-216ENST00000512683 PGM5Q15124 567 aa14.57□□□□□ -0.08
VEGFA-216ENST00000512683 TRIM71Q2Q1W2 868 aaKnown RBP14.57□□□□□ -0.08
VEGFA-216ENST00000512683 GNPTABQ3T906 1256 aa14.57□□□□□ -0.08
VEGFA-216ENST00000512683 XRRA1Q6P2D8 792 aa14.57□□□□□ -0.08
VEGFA-216ENST00000512683 STAG2Q8N3U4 1231 aa14.57□□□□□ -0.08
VEGFA-216ENST00000512683 SPATA33Q96N06 139 aa14.57□□□□□ -0.08
VEGFA-216ENST00000512683 MAP3K14Q99558 947 aa14.57□□□□□ -0.08
VEGFA-216ENST00000512683 ALG1Q9BT22 464 aa14.57□□□□□ -0.08
VEGFA-216ENST00000512683 MTA3Q9BTC8 594 aa14.57□□□□□ -0.08
VEGFA-216ENST00000512683 USP26Q9BXU7 913 aa14.57□□□□□ -0.08
VEGFA-216ENST00000512683 MLXIPQ9HAP2 919 aa14.57□□□□□ -0.08
VEGFA-216ENST00000512683 INSL6Q9Y581 213 aa14.57□□□□□ -0.08
VEGFA-216ENST00000512683 MYO9BQ13459 2157 aa14.56□□□□□ -0.08
VEGFA-216ENST00000512683 RFXAPO00287 272 aa14.56□□□□□ -0.08
VEGFA-216ENST00000512683 LGR5O75473 907 aa14.56□□□□□ -0.08
VEGFA-216ENST00000512683 COL9A1P20849 921 aa14.56□□□□□ -0.08
VEGFA-216ENST00000512683 ICAM3P32942 547 aa14.56□□□□□ -0.08
VEGFA-216ENST00000512683 GRB10Q13322 594 aa14.56□□□□□ -0.08
VEGFA-216ENST00000512683 NEDD9Q14511 834 aa14.56□□□□□ -0.08
VEGFA-216ENST00000512683 GRM4Q14833 912 aa14.56□□□□□ -0.08
VEGFA-216ENST00000512683 HSDL1Q3SXM5 330 aa14.56□□□□□ -0.08
VEGFA-216ENST00000512683 SERINC5Q86VE9 423 aa14.56□□□□□ -0.08
VEGFA-216ENST00000512683 MICALL1Q8N3F8 863 aa14.56□□□□□ -0.08
VEGFA-216ENST00000512683 TGS1Q96RS0 853 aaKnown RBP14.56□□□□□ -0.08
VEGFA-216ENST00000512683 ARIH1Q9Y4X5 557 aaPredicted RBP14.56□□□□□ -0.08
VEGFA-216ENST00000512683 MUC3AQ02505 3323 aa14.56□□□□□ -0.08
VEGFA-216ENST00000512683 BDP1A6H8Y1 2624 aa14.55□□□□□ -0.08
VEGFA-216ENST00000512683 RSPH10B2B2RC85 870 aa14.55□□□□□ -0.08
VEGFA-216ENST00000512683 H3BRB1 525 aa14.55□□□□□ -0.08
VEGFA-216ENST00000512683 LPXNO60711 386 aa14.55□□□□□ -0.08
VEGFA-216ENST00000512683 GGPS1O95749 300 aa14.55□□□□□ -0.08
VEGFA-216ENST00000512683 RSPH10BP0C881 870 aa14.55□□□□□ -0.08
VEGFA-216ENST00000512683 MYCLP12524 364 aaPredicted RBP14.55□□□□□ -0.08
VEGFA-216ENST00000512683 CHMLP26374 656 aa14.55□□□□□ -0.08
VEGFA-216ENST00000512683 HOXC8P31273 242 aa14.55□□□□□ -0.08
VEGFA-216ENST00000512683 TROAPQ12815 778 aa14.55□□□□□ -0.08
VEGFA-216ENST00000512683 ZNF618Q5T7W0 954 aa14.55□□□□□ -0.08
VEGFA-216ENST00000512683 TRAF7Q6Q0C0 670 aa14.55□□□□□ -0.08
VEGFA-216ENST00000512683 TMTC2Q8N394 836 aa14.55□□□□□ -0.08
VEGFA-216ENST00000512683 SAMD11Q96NU1 681 aa14.55□□□□□ -0.08
VEGFA-216ENST00000512683 SENP7Q9BQF6 1050 aa14.55□□□□□ -0.08
VEGFA-216ENST00000512683 C16orf70Q9BSU1 422 aa14.55□□□□□ -0.08
VEGFA-216ENST00000512683 TUT1Q9H6E5 874 aaKnown RBP14.55□□□□□ -0.08
VEGFA-216ENST00000512683 CERS4Q9HA82 394 aa14.55□□□□□ -0.08
VEGFA-216ENST00000512683 C17orf102A2RUQ5 167 aa14.54□□□□□ -0.08
VEGFA-216ENST00000512683 EPOPA6NHQ4 379 aa14.54□□□□□ -0.08
VEGFA-216ENST00000512683 IFIT3O14879 490 aaKnown RBP14.54□□□□□ -0.08
VEGFA-216ENST00000512683 PPP1R11O60927 126 aaPredicted RBP14.54□□□□□ -0.08
VEGFA-216ENST00000512683 AMHP03971 560 aa14.54□□□□□ -0.08
VEGFA-216ENST00000512683 PTH1RQ03431 593 aa14.54□□□□□ -0.08
VEGFA-216ENST00000512683 METTL7BQ6UX53 244 aa14.54□□□□□ -0.08
VEGFA-216ENST00000512683 CYB5R4Q7L1T6 521 aa14.54□□□□□ -0.08
VEGFA-216ENST00000512683 CATIPQ7Z7H3 387 aa14.54□□□□□ -0.08
VEGFA-216ENST00000512683 RALYLQ86SE5 291 aaKnown RBP14.54□□□□□ -0.08
VEGFA-216ENST00000512683 GIMAP8Q8ND71 665 aaPredicted RBP14.54□□□□□ -0.08
VEGFA-216ENST00000512683 NCOA7Q8NI08 942 aa14.54□□□□□ -0.08
VEGFA-216ENST00000512683 PPP1R13LQ8WUF5 828 aa14.54□□□□□ -0.08
VEGFA-216ENST00000512683 INPP4AQ96PE3 977 aaPredicted RBP14.54□□□□□ -0.08
VEGFA-216ENST00000512683 LZTS2Q9BRK4 669 aa14.54□□□□□ -0.08
VEGFA-216ENST00000512683 SPATA31C2B4DYI2 1134 aa14.53□□□□□ -0.08
VEGFA-216ENST00000512683 UBA1P22314 1058 aaKnown RBP14.53□□□□□ -0.08
VEGFA-216ENST00000512683 GNAQP50148 359 aa14.53□□□□□ -0.08
VEGFA-216ENST00000512683 DEFB103AP81534 67 aa14.53□□□□□ -0.08
VEGFA-216ENST00000512683 SP2Q02086 613 aa14.53□□□□□ -0.08
VEGFA-216ENST00000512683 TFF2Q03403 129 aa14.53□□□□□ -0.08
VEGFA-216ENST00000512683 WTAPQ15007 396 aa14.53□□□□□ -0.08
VEGFA-216ENST00000512683 PLEKHG4Q58EX7 1191 aa14.53□□□□□ -0.08
VEGFA-216ENST00000512683 PIGSQ96S52 555 aa14.53□□□□□ -0.08
VEGFA-216ENST00000512683 SUGCTQ9HAC7 445 aa14.53□□□□□ -0.08
VEGFA-216ENST00000512683 FRMPD4Q14CM0 1322 aa14.52□□□□□ -0.08
VEGFA-216ENST00000512683 LINC01553A4QN01 128 aa14.52□□□□□ -0.09
VEGFA-216ENST00000512683 PIK3CDO00329 1044 aa14.52□□□□□ -0.09
VEGFA-216ENST00000512683 NOP56O00567 594 aaKnown RBP14.52□□□□□ -0.09
VEGFA-216ENST00000512683 FIBPO43427 364 aa14.52□□□□□ -0.09
VEGFA-216ENST00000512683 ARHGEF15O94989 841 aa14.52□□□□□ -0.09
VEGFA-216ENST00000512683 CYP21A2P08686 494 aa14.52□□□□□ -0.09
VEGFA-216ENST00000512683 ZNF286BP0CG31 522 aa14.52□□□□□ -0.09
VEGFA-216ENST00000512683 HOXA13P31271 388 aaPredicted RBP14.52□□□□□ -0.09
VEGFA-216ENST00000512683 KIF5BP33176 963 aa14.52□□□□□ -0.09
VEGFA-216ENST00000512683 THPOP40225 353 aa14.52□□□□□ -0.09
VEGFA-216ENST00000512683 HTRA4P83105 476 aaPredicted RBP14.52□□□□□ -0.09
VEGFA-216ENST00000512683 FAM43BQ6ZT52 329 aaPredicted RBP14.52□□□□□ -0.09
VEGFA-216ENST00000512683 TEX2Q8IWB9 1127 aa14.52□□□□□ -0.09
VEGFA-216ENST00000512683 DBF4BQ8NFT6 615 aa14.52□□□□□ -0.09
VEGFA-216ENST00000512683 SP7Q8TDD2 431 aaPredicted RBP14.52□□□□□ -0.09
VEGFA-216ENST00000512683 SEPT8Q92599 483 aa14.52□□□□□ -0.09
VEGFA-216ENST00000512683 APBB2Q92870 758 aa14.52□□□□□ -0.09
VEGFA-216ENST00000512683 ATP6V0A1Q93050 837 aa14.52□□□□□ -0.09
VEGFA-216ENST00000512683 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP14.51□□□□□ -0.09
VEGFA-216ENST00000512683 MAFGO15525 162 aa14.51□□□□□ -0.09
VEGFA-216ENST00000512683 SGSM2O43147 1006 aa14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms