RNA–Protein interactions for RNA: ENST00000512274.1

PDLIM5-217, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 372 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-217ENST00000512274 FAM50BQ9Y247 325 aa12.1□□□□□ -0.47
PDLIM5-217ENST00000512274 ATP6V1DQ9Y5K8 247 aa12.1□□□□□ -0.47
PDLIM5-217ENST00000512274 SOWAHBA6NEL2 793 aa12.09□□□□□ -0.47
PDLIM5-217ENST00000512274 STX6O43752 255 aa12.09□□□□□ -0.47
PDLIM5-217ENST00000512274 BAIAP3O94812 1187 aa12.09□□□□□ -0.47
PDLIM5-217ENST00000512274 SYT1P21579 422 aa12.09□□□□□ -0.47
PDLIM5-217ENST00000512274 GJB2P29033 226 aa12.09□□□□□ -0.47
PDLIM5-217ENST00000512274 MCM4P33991 863 aa12.09□□□□□ -0.47
PDLIM5-217ENST00000512274 CDK8P49336 464 aa12.09□□□□□ -0.47
PDLIM5-217ENST00000512274 CHMP4BP1P59074 171 aa12.09□□□□□ -0.47
PDLIM5-217ENST00000512274 CTDSPL2Q05D32 466 aa12.09□□□□□ -0.47
PDLIM5-217ENST00000512274 APOBRQ0VD83 1088 aa12.09□□□□□ -0.47
PDLIM5-217ENST00000512274 CLUL1Q15846 466 aa12.09□□□□□ -0.47
PDLIM5-217ENST00000512274 NBPF20Q3BBV1 942 aa12.09□□□□□ -0.47
PDLIM5-217ENST00000512274 C16orf86Q6ZW13 317 aa12.09□□□□□ -0.47
PDLIM5-217ENST00000512274 IQCA1Q86XH1 822 aa12.09□□□□□ -0.47
PDLIM5-217ENST00000512274 RNF135Q8IUD6 432 aa12.09□□□□□ -0.47
PDLIM5-217ENST00000512274 FBXO16Q8IX29 292 aaPredicted RBP12.09□□□□□ -0.47
PDLIM5-217ENST00000512274 SPRYD3Q8NCJ5 442 aa12.09□□□□□ -0.47
PDLIM5-217ENST00000512274 ATOH1Q92858 354 aaPredicted RBP12.09□□□□□ -0.47
PDLIM5-217ENST00000512274 KIFC2Q96AC6 838 aa12.09□□□□□ -0.47
PDLIM5-217ENST00000512274 STK36Q9NRP7 1315 aa12.09□□□□□ -0.47
PDLIM5-217ENST00000512274 PLXNA3P51805 1871 aa12.08□□□□□ -0.48
PDLIM5-217ENST00000512274 TECTAO75443 2155 aa12.08□□□□□ -0.48
PDLIM5-217ENST00000512274 KLF18A0A0U1RQI7 1052 aa12.08□□□□□ -0.48
PDLIM5-217ENST00000512274 CCDC196A0A1B0GTZ2 297 aa12.08□□□□□ -0.48
PDLIM5-217ENST00000512274 ERICH2A1L162 156 aa12.08□□□□□ -0.48
PDLIM5-217ENST00000512274 TMEM221A6NGB7 291 aa12.08□□□□□ -0.48
PDLIM5-217ENST00000512274 MINDY4BA8MYZ0 360 aa12.08□□□□□ -0.48
PDLIM5-217ENST00000512274 M0R296 226 aa12.08□□□□□ -0.48
PDLIM5-217ENST00000512274 CDKL5O76039 1030 aa12.08□□□□□ -0.48
PDLIM5-217ENST00000512274 HERC4Q5GLZ8 1057 aaPredicted RBP12.08□□□□□ -0.48
PDLIM5-217ENST00000512274 TCEAL5Q5H9L2 206 aa12.08□□□□□ -0.48
PDLIM5-217ENST00000512274 IQSEC1Q6DN90 963 aa12.08□□□□□ -0.48
PDLIM5-217ENST00000512274 TAPT1Q6NXT6 567 aa12.08□□□□□ -0.48
PDLIM5-217ENST00000512274 DGKHQ86XP1 1220 aa12.08□□□□□ -0.48
PDLIM5-217ENST00000512274 SUGP1Q8IWZ8 645 aaKnown RBP12.08□□□□□ -0.48
PDLIM5-217ENST00000512274 PRPF38AQ8NAV1 312 aaKnown RBP12.08□□□□□ -0.48
PDLIM5-217ENST00000512274 EDAQ92838 391 aa12.08□□□□□ -0.48
PDLIM5-217ENST00000512274 CCDC17Q96LX7 622 aa12.08□□□□□ -0.48
PDLIM5-217ENST00000512274 RAD9AQ99638 391 aa12.08□□□□□ -0.48
PDLIM5-217ENST00000512274 KANSL2Q9H9L4 492 aa12.08□□□□□ -0.48
PDLIM5-217ENST00000512274 INCENPQ9NQS7 918 aa12.08□□□□□ -0.48
PDLIM5-217ENST00000512274 CLDND1Q9NY35 253 aa12.08□□□□□ -0.48
PDLIM5-217ENST00000512274 FBXO40Q9UH90 709 aa12.08□□□□□ -0.48
PDLIM5-217ENST00000512274 BRPF3Q9ULD4 1205 aa12.08□□□□□ -0.48
PDLIM5-217ENST00000512274 ASB14A6NK59 587 aa12.07□□□□□ -0.48
PDLIM5-217ENST00000512274 IFIT3O14879 490 aaKnown RBP12.07□□□□□ -0.48
PDLIM5-217ENST00000512274 DDAH1O94760 285 aa12.07□□□□□ -0.48
PDLIM5-217ENST00000512274 CTDNEP1O95476 244 aa12.07□□□□□ -0.48
PDLIM5-217ENST00000512274 CALM1P0DP23 149 aa12.07□□□□□ -0.48
PDLIM5-217ENST00000512274 CALM2P0DP24 149 aa12.07□□□□□ -0.48
PDLIM5-217ENST00000512274 CALM3P0DP25 149 aa12.07□□□□□ -0.48
PDLIM5-217ENST00000512274 ZSCAN22P10073 491 aaPredicted RBP12.07□□□□□ -0.48
PDLIM5-217ENST00000512274 PURAQ00577 322 aaKnown RBP12.07□□□□□ -0.48
PDLIM5-217ENST00000512274 BFSP2Q13515 415 aa12.07□□□□□ -0.48
PDLIM5-217ENST00000512274 WTAPQ15007 396 aa12.07□□□□□ -0.48
PDLIM5-217ENST00000512274 TCTN1Q2MV58 587 aa12.07□□□□□ -0.48
PDLIM5-217ENST00000512274 CPLX2Q6PUV4 134 aaKnown RBP12.07□□□□□ -0.48
PDLIM5-217ENST00000512274 NECAB1Q8N987 351 aa12.07□□□□□ -0.48
PDLIM5-217ENST00000512274 FAM133AQ8N9E0 248 aa12.07□□□□□ -0.48
PDLIM5-217ENST00000512274 CHST13Q8NET6 341 aa12.07□□□□□ -0.48
PDLIM5-217ENST00000512274 PABPC5Q96DU9 382 aaKnown RBP12.07□□□□□ -0.48
PDLIM5-217ENST00000512274 MRPL38Q96DV4 380 aaKnown RBP12.07□□□□□ -0.48
PDLIM5-217ENST00000512274 ZSCAN10Q96SZ4 725 aaPredicted RBP12.07□□□□□ -0.48
PDLIM5-217ENST00000512274 PRRX2Q99811 253 aa12.07□□□□□ -0.48
PDLIM5-217ENST00000512274 UBAC1Q9BSL1 405 aa12.07□□□□□ -0.48
PDLIM5-217ENST00000512274 LRRC2Q9BYS8 371 aa12.07□□□□□ -0.48
PDLIM5-217ENST00000512274 GPHNQ9NQX3 736 aaPredicted RBP12.07□□□□□ -0.48
PDLIM5-217ENST00000512274 POLR3EQ9NVU0 708 aa12.07□□□□□ -0.48
PDLIM5-217ENST00000512274 MTMR6Q9Y217 621 aa12.07□□□□□ -0.48
PDLIM5-217ENST00000512274 NOD1Q9Y239 953 aa12.07□□□□□ -0.48
PDLIM5-217ENST00000512274 MYH4Q9Y623 1939 aa12.06□□□□□ -0.48
PDLIM5-217ENST00000512274 GOLGA8BA8MQT2 603 aa12.06□□□□□ -0.48
PDLIM5-217ENST00000512274 GOLGA6L22H0YM25 854 aa12.06□□□□□ -0.48
PDLIM5-217ENST00000512274 PITPNM1O00562 1244 aa12.06□□□□□ -0.48
PDLIM5-217ENST00000512274 ATP2A1O14983 1001 aa12.06□□□□□ -0.48
PDLIM5-217ENST00000512274 ZBTB43O43298 467 aa12.06□□□□□ -0.48
PDLIM5-217ENST00000512274 PRDM1O75626 825 aa12.06□□□□□ -0.48
PDLIM5-217ENST00000512274 GJB5O95377 273 aa12.06□□□□□ -0.48
PDLIM5-217ENST00000512274 BAG4O95429 457 aaKnown RBP12.06□□□□□ -0.48
PDLIM5-217ENST00000512274 PKP1Q13835 747 aa12.06□□□□□ -0.48
PDLIM5-217ENST00000512274 NTRK3Q16288 839 aa12.06□□□□□ -0.48
PDLIM5-217ENST00000512274 PPP4R3BQ5MIZ7 849 aa12.06□□□□□ -0.48
PDLIM5-217ENST00000512274 TRIM67Q6ZTA4 783 aa12.06□□□□□ -0.48
PDLIM5-217ENST00000512274 BMP8AQ7Z5Y6 402 aa12.06□□□□□ -0.48
PDLIM5-217ENST00000512274 FAM177A1Q8N128 213 aaPredicted RBP12.06□□□□□ -0.48
PDLIM5-217ENST00000512274 ENAHQ8N8S7 591 aaPredicted RBP12.06□□□□□ -0.48
PDLIM5-217ENST00000512274 TMEM87AQ8NBN3 555 aa12.06□□□□□ -0.48
PDLIM5-217ENST00000512274 BANK1Q8NDB2 785 aa12.06□□□□□ -0.48
PDLIM5-217ENST00000512274 FOXD4L1Q9NU39 408 aa12.06□□□□□ -0.48
PDLIM5-217ENST00000512274 Q9Y3F1 56 aa12.06□□□□□ -0.48
PDLIM5-217ENST00000512274 SLC12A7Q9Y666 1083 aa12.06□□□□□ -0.48
PDLIM5-217ENST00000512274 PTPDC1A2A3K4 754 aa12.05□□□□□ -0.48
PDLIM5-217ENST00000512274 CCDC69A6NI79 296 aa12.05□□□□□ -0.48
PDLIM5-217ENST00000512274 H0Y858 1186 aa12.05□□□□□ -0.48
PDLIM5-217ENST00000512274 NDUFB10O96000 172 aa12.05□□□□□ -0.48
PDLIM5-217ENST00000512274 F13A1P00488 732 aa12.05□□□□□ -0.48
PDLIM5-217ENST00000512274 IFNAR1P17181 557 aa12.05□□□□□ -0.48
PDLIM5-217ENST00000512274 METAP2P50579 478 aaKnown RBP eCLIP12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms