RNA–Protein interactions for RNA: ENST00000512068.1

HTT-209, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 401 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-209ENST00000512068 ZNF76P36508 570 aa9.14□□□□□ -0.95
HTT-209ENST00000512068 LONP1P36776 959 aaKnown RBP9.14□□□□□ -0.95
HTT-209ENST00000512068 PRPHP41219 470 aa9.14□□□□□ -0.95
HTT-209ENST00000512068 HMGCS2P54868 508 aa9.14□□□□□ -0.95
HTT-209ENST00000512068 CALCRLQ16602 461 aa9.14□□□□□ -0.95
HTT-209ENST00000512068 STX1AQ16623 288 aa9.14□□□□□ -0.95
HTT-209ENST00000512068 NOM1Q5C9Z4 860 aaKnown RBP9.14□□□□□ -0.95
HTT-209ENST00000512068 SHC4Q6S5L8 630 aa9.14□□□□□ -0.95
HTT-209ENST00000512068 MCF2L2Q86YR7 1114 aa9.14□□□□□ -0.95
HTT-209ENST00000512068 ANKRD13AQ8IZ07 590 aa9.14□□□□□ -0.95
HTT-209ENST00000512068 FMR1NBQ8N0W7 255 aaPredicted RBP9.14□□□□□ -0.95
HTT-209ENST00000512068 ANKLE1Q8NAG6 615 aa9.14□□□□□ -0.95
HTT-209ENST00000512068 DDX55Q8NHQ9 600 aaKnown RBP eCLIP9.14□□□□□ -0.95
HTT-209ENST00000512068 USP25Q9UHP3 1055 aa9.14□□□□□ -0.95
HTT-209ENST00000512068 FCF1Q9Y324 198 aaKnown RBP9.14□□□□□ -0.95
HTT-209ENST00000512068 PHIPQ8WWQ0 1821 aa9.14□□□□□ -0.95
HTT-209ENST00000512068 OTOFQ9HC10 1997 aa9.13□□□□□ -0.95
HTT-209ENST00000512068 SSC5DA1L4H1 1573 aa9.13□□□□□ -0.95
HTT-209ENST00000512068 FSD2A1L4K1 749 aa9.13□□□□□ -0.95
HTT-209ENST00000512068 USP17L15C9J2P7 530 aa9.13□□□□□ -0.95
HTT-209ENST00000512068 USP17L13C9JLJ4 530 aa9.13□□□□□ -0.95
HTT-209ENST00000512068 USP17L11C9JVI0 530 aa9.13□□□□□ -0.95
HTT-209ENST00000512068 USP17L18D6R9N7 530 aa9.13□□□□□ -0.95
HTT-209ENST00000512068 USP17L22D6RA61 530 aa9.13□□□□□ -0.95
HTT-209ENST00000512068 USP17L17D6RBQ6 530 aa9.13□□□□□ -0.95
HTT-209ENST00000512068 USP17L19D6RCP7 530 aa9.13□□□□□ -0.95
HTT-209ENST00000512068 USP17L20D6RJB6 530 aa9.13□□□□□ -0.95
HTT-209ENST00000512068 CAVIN2O95810 425 aa9.13□□□□□ -0.95
HTT-209ENST00000512068 CFBP00751 764 aa9.13□□□□□ -0.95
HTT-209ENST00000512068 ICAM1P05362 532 aa9.13□□□□□ -0.95
HTT-209ENST00000512068 UBA7P41226 1012 aa9.13□□□□□ -0.95
HTT-209ENST00000512068 TYRO3Q06418 890 aa9.13□□□□□ -0.95
HTT-209ENST00000512068 USP17L24Q0WX57 530 aa9.13□□□□□ -0.95
HTT-209ENST00000512068 SNW1Q13573 536 aaKnown RBP9.13□□□□□ -0.95
HTT-209ENST00000512068 VGLL4Q14135 290 aa9.13□□□□□ -0.95
HTT-209ENST00000512068 KIAA1755Q5JYT7 1200 aa9.13□□□□□ -0.95
HTT-209ENST00000512068 SPECC1Q5M775 1068 aa9.13□□□□□ -0.95
HTT-209ENST00000512068 USP17L6PQ6QN14 398 aa9.13□□□□□ -0.95
HTT-209ENST00000512068 LDHDQ86WU2 507 aa9.13□□□□□ -0.95
HTT-209ENST00000512068 ENGASEQ8NFI3 743 aa9.13□□□□□ -0.95
HTT-209ENST00000512068 CDK5RAP3Q96JB5 506 aa9.13□□□□□ -0.95
HTT-209ENST00000512068 C12orf42Q96LP6 360 aa9.13□□□□□ -0.95
HTT-209ENST00000512068 AK8Q96MA6 479 aa9.13□□□□□ -0.95
HTT-209ENST00000512068 NAT10Q9H0A0 1025 aaKnown RBP9.13□□□□□ -0.95
HTT-209ENST00000512068 ANO10Q9NW15 660 aa9.13□□□□□ -0.95
HTT-209ENST00000512068 DDX25Q9UHL0 483 aaKnown RBP9.13□□□□□ -0.95
HTT-209ENST00000512068 PPP1R9AQ9ULJ8 1098 aa9.13□□□□□ -0.95
HTT-209ENST00000512068 FZD1Q9UP38 647 aa9.13□□□□□ -0.95
HTT-209ENST00000512068 RABGAP1Q9Y3P9 1069 aa9.13□□□□□ -0.95
HTT-209ENST00000512068 RBBP6Q7Z6E9 1792 aaKnown RBP9.13□□□□□ -0.95
HTT-209ENST00000512068 FAM237AA0A1B0GTK4 181 aa9.12□□□□□ -0.95
HTT-209ENST00000512068 POLR2DO15514 142 aaKnown RBP9.12□□□□□ -0.95
HTT-209ENST00000512068 SMC2O95347 1197 aa9.12□□□□□ -0.95
HTT-209ENST00000512068 ALAS1P13196 640 aa9.12□□□□□ -0.95
HTT-209ENST00000512068 USP11P51784 963 aa9.12□□□□□ -0.95
HTT-209ENST00000512068 TPM4P67936 248 aa9.12□□□□□ -0.95
HTT-209ENST00000512068 PABPC4Q13310 644 aaKnown RBP eCLIP9.12□□□□□ -0.95
HTT-209ENST00000512068 PTCRAQ6ISU1 281 aaPredicted RBP9.12□□□□□ -0.95
HTT-209ENST00000512068 KRBA2Q6ZNG9 492 aa9.12□□□□□ -0.95
HTT-209ENST00000512068 GADL1Q6ZQY3 521 aa9.12□□□□□ -0.95
HTT-209ENST00000512068 FCHSD1Q86WN1 690 aa9.12□□□□□ -0.95
HTT-209ENST00000512068 ERO1BQ86YB8 467 aa9.12□□□□□ -0.95
HTT-209ENST00000512068 CPXCR1Q8N123 301 aa9.12□□□□□ -0.95
HTT-209ENST00000512068 SAMD3Q8N6K7 520 aa9.12□□□□□ -0.95
HTT-209ENST00000512068 PDILTQ8N807 584 aa9.12□□□□□ -0.95
HTT-209ENST00000512068 IQUBQ8NA54 791 aa9.12□□□□□ -0.95
HTT-209ENST00000512068 RNF214Q8ND24 703 aa9.12□□□□□ -0.95
HTT-209ENST00000512068 ARMC2Q8NEN0 867 aa9.12□□□□□ -0.95
HTT-209ENST00000512068 DHX58Q96C10 678 aa9.12□□□□□ -0.95
HTT-209ENST00000512068 CALML4Q96GE6 196 aa9.12□□□□□ -0.95
HTT-209ENST00000512068 ZNF408Q9H9D4 720 aa9.12□□□□□ -0.95
HTT-209ENST00000512068 ELP3Q9H9T3 547 aa9.12□□□□□ -0.95
HTT-209ENST00000512068 FBXO28Q9NVF7 368 aa9.12□□□□□ -0.95
HTT-209ENST00000512068 FKBPLQ9UIM3 349 aa9.12□□□□□ -0.95
HTT-209ENST00000512068 HPSEQ9Y251 543 aa9.12□□□□□ -0.95
HTT-209ENST00000512068 SNCAIPQ9Y6H5 919 aa9.12□□□□□ -0.95
HTT-209ENST00000512068 GOLGA6L19H0YKK7 550 aa9.11□□□□□ -0.95
HTT-209ENST00000512068 PIK3CDO00329 1044 aa9.11□□□□□ -0.95
HTT-209ENST00000512068 WNT7AO00755 349 aa9.11□□□□□ -0.95
HTT-209ENST00000512068 ADAMTS3O15072 1205 aa9.11□□□□□ -0.95
HTT-209ENST00000512068 STAT6P42226 847 aa9.11□□□□□ -0.95
HTT-209ENST00000512068 TXKP42681 527 aa9.11□□□□□ -0.95
HTT-209ENST00000512068 ABL2P42684 1182 aa9.11□□□□□ -0.95
HTT-209ENST00000512068 IRX3P78415 501 aaPredicted RBP9.11□□□□□ -0.95
HTT-209ENST00000512068 ARHGAP4P98171 946 aa9.11□□□□□ -0.95
HTT-209ENST00000512068 PPATQ06203 517 aa9.11□□□□□ -0.95
HTT-209ENST00000512068 IRF5Q13568 498 aa9.11□□□□□ -0.95
HTT-209ENST00000512068 COG2Q14746 738 aa9.11□□□□□ -0.95
HTT-209ENST00000512068 PPP4R3AQ6IN85 833 aa9.11□□□□□ -0.95
HTT-209ENST00000512068 MOXD1Q6UVY6 613 aa9.11□□□□□ -0.95
HTT-209ENST00000512068 RBM43Q6ZSC3 357 aaKnown RBP9.11□□□□□ -0.95
HTT-209ENST00000512068 GAS2L3Q86XJ1 694 aa9.11□□□□□ -0.95
HTT-209ENST00000512068 ELOA2Q8IYF1 753 aaPredicted RBP9.11□□□□□ -0.95
HTT-209ENST00000512068 SLFN12Q8IYM2 578 aa9.11□□□□□ -0.95
HTT-209ENST00000512068 CCDC47Q96A33 483 aaKnown RBP9.11□□□□□ -0.95
HTT-209ENST00000512068 UNC93B1Q9H1C4 597 aa9.11□□□□□ -0.95
HTT-209ENST00000512068 SLC38A10Q9HBR0 1119 aa9.11□□□□□ -0.95
HTT-209ENST00000512068 RAVER2Q9HCJ3 691 aaKnown RBP9.11□□□□□ -0.95
HTT-209ENST00000512068 HOXC10Q9NYD6 342 aa9.11□□□□□ -0.95
HTT-209ENST00000512068 DACH1Q9UI36 760 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms