RNA–Protein interactions for RNA: ENST00000511892.5

RNF4-217, Transcript of ring finger protein 4, humanhuman

TSL 4

Gene RNF4, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-217ENST00000511892 IWS1Q96ST2 819 aa6.76□□□□□ -1.33
RNF4-217ENST00000511892 RMDN3Q96TC7 470 aa6.76□□□□□ -1.33
RNF4-217ENST00000511892 MPHOSPH6Q99547 160 aaKnown RBP6.76□□□□□ -1.33
RNF4-217ENST00000511892 LARP6Q9BRS8 491 aaKnown RBP6.76□□□□□ -1.33
RNF4-217ENST00000511892 MYL10Q9BUA6 226 aa6.76□□□□□ -1.33
RNF4-217ENST00000511892 IRX2Q9BZI1 471 aaPredicted RBP6.76□□□□□ -1.33
RNF4-217ENST00000511892 TRPV6Q9H1D0 765 aa6.76□□□□□ -1.33
RNF4-217ENST00000511892 PXMP2Q9NR77 195 aa6.76□□□□□ -1.33
RNF4-217ENST00000511892 MTMR10Q9NXD2 777 aa6.76□□□□□ -1.33
RNF4-217ENST00000511892 PCDHA1Q9Y5I3 950 aa6.76□□□□□ -1.33
RNF4-217ENST00000511892 UMODL1Q5DID0 1318 aa6.76□□□□□ -1.33
RNF4-217ENST00000511892 MUC3AQ02505 3323 aa6.75□□□□□ -1.33
RNF4-217ENST00000511892 PNMA6FA0A0J9YX94 578 aa6.75□□□□□ -1.33
RNF4-217ENST00000511892 B4DLN1 442 aa6.75□□□□□ -1.33
RNF4-217ENST00000511892 SH2B2O14492 632 aaPredicted RBP6.75□□□□□ -1.33
RNF4-217ENST00000511892 NKRFO15226 690 aaKnown RBP eCLIP6.75□□□□□ -1.33
RNF4-217ENST00000511892 TLR3O15455 904 aaKnown RBP6.75□□□□□ -1.33
RNF4-217ENST00000511892 B4GALT4O60513 344 aa6.75□□□□□ -1.33
RNF4-217ENST00000511892 RGS20O76081 388 aa6.75□□□□□ -1.33
RNF4-217ENST00000511892 NR3C2P08235 984 aa6.75□□□□□ -1.33
RNF4-217ENST00000511892 MYL3P08590 195 aa6.75□□□□□ -1.33
RNF4-217ENST00000511892 CSF2RAP15509 400 aa6.75□□□□□ -1.33
RNF4-217ENST00000511892 HOXA13P31271 388 aaPredicted RBP6.75□□□□□ -1.33
RNF4-217ENST00000511892 MCM5P33992 734 aa6.75□□□□□ -1.33
RNF4-217ENST00000511892 CPT1AP50416 773 aa6.75□□□□□ -1.33
RNF4-217ENST00000511892 MRPL12P52815 198 aaKnown RBP6.75□□□□□ -1.33
RNF4-217ENST00000511892 ARHGAP1Q07960 439 aa6.75□□□□□ -1.33
RNF4-217ENST00000511892 TTLL4Q14679 1199 aa6.75□□□□□ -1.33
RNF4-217ENST00000511892 STXBP2Q15833 593 aa6.75□□□□□ -1.33
RNF4-217ENST00000511892 NBPF20Q3BBV1 942 aa6.75□□□□□ -1.33
RNF4-217ENST00000511892 TMEM240Q5SV17 173 aa6.75□□□□□ -1.33
RNF4-217ENST00000511892 RASIP1Q5U651 963 aa6.75□□□□□ -1.33
RNF4-217ENST00000511892 ARHGEF16Q5VV41 709 aa6.75□□□□□ -1.33
RNF4-217ENST00000511892 FAM109BQ6ICB4 259 aaPredicted RBP6.75□□□□□ -1.33
RNF4-217ENST00000511892 CASC1Q6TDU7 716 aa6.75□□□□□ -1.33
RNF4-217ENST00000511892 SEPT14Q6ZU15 432 aa6.75□□□□□ -1.33
RNF4-217ENST00000511892 CATIPQ7Z7H3 387 aa6.75□□□□□ -1.33
RNF4-217ENST00000511892 SRBD1Q8N5C6 995 aaKnown RBP6.75□□□□□ -1.33
RNF4-217ENST00000511892 IL31RAQ8NI17 732 aa6.75□□□□□ -1.33
RNF4-217ENST00000511892 PIBF1Q8WXW3 757 aa6.75□□□□□ -1.33
RNF4-217ENST00000511892 ZDHHC16Q969W1 377 aa6.75□□□□□ -1.33
RNF4-217ENST00000511892 GUCD1Q96NT3 240 aa6.75□□□□□ -1.33
RNF4-217ENST00000511892 MAP3K14Q99558 947 aa6.75□□□□□ -1.33
RNF4-217ENST00000511892 BUD13Q9BRD0 619 aaKnown RBP eCLIP6.75□□□□□ -1.333e-6■■□□□ 12.4
RNF4-217ENST00000511892 PDCD2LQ9BRP1 358 aa6.75□□□□□ -1.33
RNF4-217ENST00000511892 MTG1Q9BT17 334 aaPredicted RBP6.75□□□□□ -1.33
RNF4-217ENST00000511892 MTA3Q9BTC8 594 aa6.75□□□□□ -1.33
RNF4-217ENST00000511892 NOC4LQ9BVI4 516 aaKnown RBP6.75□□□□□ -1.33
RNF4-217ENST00000511892 SEZ6LQ9BYH1 1024 aa6.75□□□□□ -1.33
RNF4-217ENST00000511892 LRRC2Q9BYS8 371 aa6.75□□□□□ -1.33
RNF4-217ENST00000511892 PPP1R12CQ9BZL4 782 aa6.75□□□□□ -1.33
RNF4-217ENST00000511892 ALDH8A1Q9H2A2 487 aaPredicted RBP6.75□□□□□ -1.33
RNF4-217ENST00000511892 ANO2Q9NQ90 1003 aa6.75□□□□□ -1.33
RNF4-217ENST00000511892 POLR3EQ9NVU0 708 aa6.75□□□□□ -1.33
RNF4-217ENST00000511892 DDX41Q9UJV9 622 aaKnown RBP6.75□□□□□ -1.33
RNF4-217ENST00000511892 EIF3JO75822 258 aaKnown RBP6.74□□□□□ -1.33
RNF4-217ENST00000511892 DDAH1O94760 285 aa6.74□□□□□ -1.33
RNF4-217ENST00000511892 PLEKHA8P1O95397 391 aa6.74□□□□□ -1.33
RNF4-217ENST00000511892 GH1P01241 217 aa6.74□□□□□ -1.33
RNF4-217ENST00000511892 MMP3P08254 477 aa6.74□□□□□ -1.33
RNF4-217ENST00000511892 ACRP10323 421 aa6.74□□□□□ -1.33
RNF4-217ENST00000511892 RXRAP19793 462 aa6.74□□□□□ -1.33
RNF4-217ENST00000511892 SMARCA1P28370 1054 aa6.74□□□□□ -1.33
RNF4-217ENST00000511892 LIFRP42702 1097 aa6.74□□□□□ -1.33
RNF4-217ENST00000511892 SMAD3P84022 425 aaKnown RBP6.74□□□□□ -1.33
RNF4-217ENST00000511892 SP2Q02086 613 aa6.74□□□□□ -1.33
RNF4-217ENST00000511892 PPIGQ13427 754 aaKnown RBP eCLIP6.74□□□□□ -1.334e-10■■□□□ 12.4
RNF4-217ENST00000511892 PGM5Q15124 567 aa6.74□□□□□ -1.33
RNF4-217ENST00000511892 PROX2Q3B8N5 592 aa6.74□□□□□ -1.33
RNF4-217ENST00000511892 NFRKBQ6P4R8 1299 aa6.74□□□□□ -1.33
RNF4-217ENST00000511892 VSIG10LQ86VR7 867 aa6.74□□□□□ -1.33
RNF4-217ENST00000511892 CMTR1Q8N1G2 835 aaKnown RBP6.74□□□□□ -1.33
RNF4-217ENST00000511892 SAMD3Q8N6K7 520 aa6.74□□□□□ -1.33
RNF4-217ENST00000511892 AFG1LQ8WV93 481 aa6.74□□□□□ -1.33
RNF4-217ENST00000511892 KAT2BQ92831 832 aa6.74□□□□□ -1.33
RNF4-217ENST00000511892 GPKOWQ92917 476 aaPredicted RBP eCLIP6.74□□□□□ -1.33
RNF4-217ENST00000511892 EMID1Q96A84 441 aaPredicted RBP6.74□□□□□ -1.33
RNF4-217ENST00000511892 TMEM87BQ96K49 555 aa6.74□□□□□ -1.33
RNF4-217ENST00000511892 RNPC3Q96LT9 517 aaKnown RBP6.74□□□□□ -1.33
RNF4-217ENST00000511892 FAM161BQ96MY7 647 aa6.74□□□□□ -1.33
RNF4-217ENST00000511892 SPZ1Q9BXG8 430 aa6.74□□□□□ -1.33
RNF4-217ENST00000511892 SLC4A5Q9BY07 1137 aa6.74□□□□□ -1.33
RNF4-217ENST00000511892 WNT8AQ9H1J5 351 aa6.74□□□□□ -1.33
RNF4-217ENST00000511892 TTYH1Q9H313 450 aaPredicted RBP6.74□□□□□ -1.33
RNF4-217ENST00000511892 SEMA6BQ9H3T3 888 aa6.74□□□□□ -1.33
RNF4-217ENST00000511892 HIPK3Q9H422 1215 aa6.74□□□□□ -1.33
RNF4-217ENST00000511892 TRMT13Q9NUP7 481 aaKnown RBP6.74□□□□□ -1.33
RNF4-217ENST00000511892 MAP3K20Q9NYL2 800 aaKnown RBP6.74□□□□□ -1.33
RNF4-217ENST00000511892 MICAL3Q7RTP6 2002 aa6.74□□□□□ -1.33
RNF4-217ENST00000511892 FRMPD4Q14CM0 1322 aa6.74□□□□□ -1.33
RNF4-217ENST00000511892 SIP14410 1827 aa6.73□□□□□ -1.33
RNF4-217ENST00000511892 MYH9P35579 1960 aaKnown RBP6.73□□□□□ -1.33
RNF4-217ENST00000511892 GRXCR1A8MXD5 290 aa6.73□□□□□ -1.33
RNF4-217ENST00000511892 GCOM1H8Y6P7 765 aaPredicted RBP6.73□□□□□ -1.33
RNF4-217ENST00000511892 KPNA6O60684 536 aa6.73□□□□□ -1.33
RNF4-217ENST00000511892 CDC45O75419 566 aa6.73□□□□□ -1.33
RNF4-217ENST00000511892 POLR2MP0CAP2 368 aa6.73□□□□□ -1.33
RNF4-217ENST00000511892 CYP2C9P11712 490 aa6.73□□□□□ -1.33
RNF4-217ENST00000511892 MYCLP12524 364 aaPredicted RBP6.73□□□□□ -1.33
RNF4-217ENST00000511892 KIF5BP33176 963 aa6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms