RNA–Protein interactions for RNA: ENST00000511891.5

COPS4-211, Transcript of COP9 signalosome subunit 4, humanhuman

TSL 2

Gene COPS4, Length 558 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS4-211ENST00000511891 TRAF1Q13077 416 aa11.44□□□□□ -0.58
COPS4-211ENST00000511891 ADCK5Q3MIX3 580 aa11.44□□□□□ -0.58
COPS4-211ENST00000511891 NFRKBQ6P4R8 1299 aa11.44□□□□□ -0.58
COPS4-211ENST00000511891 VSIG10LQ86VR7 867 aa11.44□□□□□ -0.58
COPS4-211ENST00000511891 TMTC2Q8N394 836 aa11.44□□□□□ -0.58
COPS4-211ENST00000511891 CCDC82Q8N4S0 544 aa11.44□□□□□ -0.58
COPS4-211ENST00000511891 SAMD3Q8N6K7 520 aa11.44□□□□□ -0.58
COPS4-211ENST00000511891 KAT2BQ92831 832 aa11.44□□□□□ -0.58
COPS4-211ENST00000511891 VWCEQ96DN2 955 aa11.44□□□□□ -0.58
COPS4-211ENST00000511891 NEK1Q96PY6 1258 aa11.44□□□□□ -0.58
COPS4-211ENST00000511891 MAP3K20Q9NYL2 800 aaKnown RBP11.44□□□□□ -0.58
COPS4-211ENST00000511891 CXXC1Q9P0U4 656 aaPredicted RBP11.44□□□□□ -0.58
COPS4-211ENST00000511891 PCDHB8Q9UN66 801 aa11.44□□□□□ -0.58
COPS4-211ENST00000511891 SLC12A7Q9Y666 1083 aa11.44□□□□□ -0.58
COPS4-211ENST00000511891 KIAA1217Q5T5P2 1943 aa11.44□□□□□ -0.58
COPS4-211ENST00000511891 HSFX4A0A1B0GTS1 333 aaPredicted RBP11.43□□□□□ -0.58
COPS4-211ENST00000511891 HSFX3A0A1B0GWH4 333 aaPredicted RBP11.43□□□□□ -0.58
COPS4-211ENST00000511891 FGBP02675 491 aa11.43□□□□□ -0.58
COPS4-211ENST00000511891 SUPT20HL2P0C7V6 817 aa11.43□□□□□ -0.58
COPS4-211ENST00000511891 ZNF286BP0CG31 522 aa11.43□□□□□ -0.58
COPS4-211ENST00000511891 PBX2P40425 430 aa11.43□□□□□ -0.58
COPS4-211ENST00000511891 GNAQP50148 359 aa11.43□□□□□ -0.58
COPS4-211ENST00000511891 SP2Q02086 613 aa11.43□□□□□ -0.58
COPS4-211ENST00000511891 RASIP1Q5U651 963 aa11.43□□□□□ -0.58
COPS4-211ENST00000511891 RNF20Q5VTR2 975 aa11.43□□□□□ -0.58
COPS4-211ENST00000511891 PSRC1Q6PGN9 363 aaPredicted RBP11.43□□□□□ -0.58
COPS4-211ENST00000511891 USP17L6PQ6QN14 398 aa11.43□□□□□ -0.58
COPS4-211ENST00000511891 OTOP2Q7RTS6 562 aa11.43□□□□□ -0.58
COPS4-211ENST00000511891 MICU3Q86XE3 530 aa11.43□□□□□ -0.58
COPS4-211ENST00000511891 DHX37Q8IY37 1157 aaKnown RBP11.43□□□□□ -0.58
COPS4-211ENST00000511891 CDX2Q99626 313 aaPredicted RBP11.43□□□□□ -0.58
COPS4-211ENST00000511891 LZTS2Q9BRK4 669 aa11.43□□□□□ -0.58
COPS4-211ENST00000511891 BCAS3Q9H6U6 928 aa11.43□□□□□ -0.58
COPS4-211ENST00000511891 RTEL1Q9NZ71 1219 aa11.43□□□□□ -0.58
COPS4-211ENST00000511891 SEC63Q9UGP8 760 aaKnown RBP11.43□□□□□ -0.58
COPS4-211ENST00000511891 MEIS2O14770 477 aa11.42□□□□□ -0.58
COPS4-211ENST00000511891 GGPS1O95749 300 aa11.42□□□□□ -0.58
COPS4-211ENST00000511891 CALM1P0DP23 149 aa11.42□□□□□ -0.58
COPS4-211ENST00000511891 CALM2P0DP24 149 aa11.42□□□□□ -0.58
COPS4-211ENST00000511891 CALM3P0DP25 149 aa11.42□□□□□ -0.58
COPS4-211ENST00000511891 CPA1P15085 419 aa11.42□□□□□ -0.58
COPS4-211ENST00000511891 CASTP20810 708 aaKnown RBP11.42□□□□□ -0.58
COPS4-211ENST00000511891 UBA1P22314 1058 aaKnown RBP11.42□□□□□ -0.58
COPS4-211ENST00000511891 DNAJB2P25686 324 aa11.42□□□□□ -0.58
COPS4-211ENST00000511891 SMARCA1P28370 1054 aa11.42□□□□□ -0.58
COPS4-211ENST00000511891 MRPS9P82933 396 aaKnown RBP11.42□□□□□ -0.58
COPS4-211ENST00000511891 EXOSC10Q01780 885 aaKnown RBP11.42□□□□□ -0.58
COPS4-211ENST00000511891 LAMC2Q13753 1193 aa11.42□□□□□ -0.58
COPS4-211ENST00000511891 DGKDQ16760 1214 aa11.42□□□□□ -0.58
COPS4-211ENST00000511891 CELF3Q5SZQ8 465 aaKnown RBP11.42□□□□□ -0.58
COPS4-211ENST00000511891 MYSM1Q5VVJ2 828 aa11.42□□□□□ -0.58
COPS4-211ENST00000511891 GDF6Q6KF10 455 aaPredicted RBP11.42□□□□□ -0.58
COPS4-211ENST00000511891 TMTC3Q6ZXV5 915 aa11.42□□□□□ -0.58
COPS4-211ENST00000511891 DEFB128Q7Z7B8 93 aa11.42□□□□□ -0.58
COPS4-211ENST00000511891 FANCBQ8NB91 859 aa11.42□□□□□ -0.58
COPS4-211ENST00000511891 SLC17A8Q8NDX2 589 aa11.42□□□□□ -0.58
COPS4-211ENST00000511891 PPTC7Q8NI37 304 aa11.42□□□□□ -0.58
COPS4-211ENST00000511891 SMARCC2Q8TAQ2 1214 aa11.42□□□□□ -0.58
COPS4-211ENST00000511891 MYLIPQ8WY64 445 aa11.42□□□□□ -0.58
COPS4-211ENST00000511891 HERVK_113Q902F9 699 aa11.42□□□□□ -0.58
COPS4-211ENST00000511891 EMID1Q96A84 441 aaPredicted RBP11.42□□□□□ -0.58
COPS4-211ENST00000511891 SPATA33Q96N06 139 aa11.42□□□□□ -0.58
COPS4-211ENST00000511891 ALG1Q9BT22 464 aa11.42□□□□□ -0.58
COPS4-211ENST00000511891 BRPF3Q9ULD4 1205 aa11.42□□□□□ -0.58
COPS4-211ENST00000511891 FRMPD4Q14CM0 1322 aa11.41□□□□□ -0.58
COPS4-211ENST00000511891 PSEN2P49810 448 aa11.41□□□□□ -0.58
COPS4-211ENST00000511891 PTPN11Q06124 597 aaPredicted RBP11.41□□□□□ -0.58
COPS4-211ENST00000511891 SEMA3FQ13275 785 aa11.41□□□□□ -0.58
COPS4-211ENST00000511891 MFSD10Q14728 455 aa11.41□□□□□ -0.58
COPS4-211ENST00000511891 PTGISQ16647 500 aa11.41□□□□□ -0.58
COPS4-211ENST00000511891 UBE2SQ16763 222 aa11.41□□□□□ -0.58
COPS4-211ENST00000511891 HSDL1Q3SXM5 330 aa11.41□□□□□ -0.58
COPS4-211ENST00000511891 APOA5Q6Q788 366 aa11.41□□□□□ -0.58
COPS4-211ENST00000511891 DHX32Q7L7V1 743 aaKnown RBP11.41□□□□□ -0.58
COPS4-211ENST00000511891 SGMS1Q86VZ5 419 aa11.41□□□□□ -0.58
COPS4-211ENST00000511891 CUL5Q93034 780 aa11.41□□□□□ -0.58
COPS4-211ENST00000511891 CTAGE1Q96RT6 745 aa11.41□□□□□ -0.58
COPS4-211ENST00000511891 PBX4Q9BYU1 374 aa11.41□□□□□ -0.58
COPS4-211ENST00000511891 HDAC6Q9UBN7 1215 aa11.41□□□□□ -0.58
COPS4-211ENST00000511891 NOD1Q9Y239 953 aa11.41□□□□□ -0.58
COPS4-211ENST00000511891 LAMA2P24043 3122 aaKnown RBP11.4□□□□□ -0.58
COPS4-211ENST00000511891 ZBBXA8MT70 800 aa11.4□□□□□ -0.58
COPS4-211ENST00000511891 IQCF3P0C7M6 154 aa11.4□□□□□ -0.58
COPS4-211ENST00000511891 ZNF200P98182 395 aaPredicted RBP11.4□□□□□ -0.58
COPS4-211ENST00000511891 GRIN2CQ14957 1233 aa11.4□□□□□ -0.58
COPS4-211ENST00000511891 KIAA0753Q2KHM9 967 aa11.4□□□□□ -0.58
COPS4-211ENST00000511891 TSGA10IPQ3SY00 556 aa11.4□□□□□ -0.58
COPS4-211ENST00000511891 KCNV1Q6PIU1 500 aa11.4□□□□□ -0.58
COPS4-211ENST00000511891 SYNE3Q6ZMZ3 975 aa11.4□□□□□ -0.58
COPS4-211ENST00000511891 HEATR3Q7Z4Q2 680 aa11.4□□□□□ -0.58
COPS4-211ENST00000511891 SESTD1Q86VW0 696 aa11.4□□□□□ -0.58
COPS4-211ENST00000511891 RPUSD2Q8IZ73 545 aaKnown RBP11.4□□□□□ -0.58
COPS4-211ENST00000511891 RETREG2Q8NC44 543 aa11.4□□□□□ -0.58
COPS4-211ENST00000511891 DHX38Q92620 1227 aaKnown RBP11.4□□□□□ -0.58
COPS4-211ENST00000511891 TIFAQ96CG3 184 aa11.4□□□□□ -0.58
COPS4-211ENST00000511891 INPP4AQ96PE3 977 aaPredicted RBP11.4□□□□□ -0.58
COPS4-211ENST00000511891 PSTPIP2Q9H939 334 aa11.4□□□□□ -0.58
COPS4-211ENST00000511891 MLXIPQ9HAP2 919 aa11.4□□□□□ -0.58
COPS4-211ENST00000511891 GTF2IRD1Q9UHL9 959 aa11.4□□□□□ -0.58
COPS4-211ENST00000511891 TELO2Q9Y4R8 837 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms