RNA–Protein interactions for RNA: ENST00000511214.1

SNF8-210, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 2

Gene SNF8, Length 429 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-210ENST00000511214 GEMIN8Q9NWZ8 242 aaKnown RBP10.04□□□□□ -0.8
SNF8-210ENST00000511214 SEC63Q9UGP8 760 aaKnown RBP10.04□□□□□ -0.8
SNF8-210ENST00000511214 CLEC11AQ9Y240 323 aa10.04□□□□□ -0.8
SNF8-210ENST00000511214 THRAP3Q9Y2W1 955 aaKnown RBP10.04□□□□□ -0.8
SNF8-210ENST00000511214 IRS2Q9Y4H2 1338 aa10.04□□□□□ -0.8
SNF8-210ENST00000511214 COL4A1P02462 1669 aa10.03□□□□□ -0.8
SNF8-210ENST00000511214 BHMG1C9JSJ3 638 aaPredicted RBP10.03□□□□□ -0.8
SNF8-210ENST00000511214 KLRF2D3W0D1 207 aa10.03□□□□□ -0.8
SNF8-210ENST00000511214 NDUFAB1O14561 156 aa10.03□□□□□ -0.8
SNF8-210ENST00000511214 RPS8P62241 208 aaKnown RBP10.03□□□□□ -0.8
SNF8-210ENST00000511214 FKBP3Q00688 224 aaKnown RBP10.03□□□□□ -0.8
SNF8-210ENST00000511214 CUL1Q13616 776 aa10.03□□□□□ -0.8
SNF8-210ENST00000511214 EZH2Q15910 746 aaKnown RBP10.03□□□□□ -0.8
SNF8-210ENST00000511214 SLC18A3Q16572 532 aa10.03□□□□□ -0.8
SNF8-210ENST00000511214 LETM2Q2VYF4 491 aa10.03□□□□□ -0.8
SNF8-210ENST00000511214 ERFEQ4G0M1 354 aa10.03□□□□□ -0.8
SNF8-210ENST00000511214 ZCWPW2Q504Y3 356 aa10.03□□□□□ -0.8
SNF8-210ENST00000511214 HYIQ5T013 277 aa10.03□□□□□ -0.8
SNF8-210ENST00000511214 MEI1Q5TIA1 1274 aa10.03□□□□□ -0.8
SNF8-210ENST00000511214 C10orf71Q711Q0 1435 aa10.03□□□□□ -0.8
SNF8-210ENST00000511214 DZIP1Q86YF9 867 aaKnown RBP10.03□□□□□ -0.8
SNF8-210ENST00000511214 ZC3H3Q8IXZ2 948 aaKnown RBP10.03□□□□□ -0.8
SNF8-210ENST00000511214 MYOCDQ8IZQ8 938 aa10.03□□□□□ -0.8
SNF8-210ENST00000511214 REXO1Q8N1G1 1221 aaKnown RBP10.03□□□□□ -0.8
SNF8-210ENST00000511214 NEDD1Q8NHV4 660 aa10.03□□□□□ -0.8
SNF8-210ENST00000511214 SMCR8Q8TEV9 937 aaPredicted RBP10.03□□□□□ -0.8
SNF8-210ENST00000511214 LRRC45Q96CN5 670 aa10.03□□□□□ -0.8
SNF8-210ENST00000511214 CDK5RAP3Q96JB5 506 aa10.03□□□□□ -0.8
SNF8-210ENST00000511214 CALR3Q96L12 384 aaKnown RBP10.03□□□□□ -0.8
SNF8-210ENST00000511214 INPP4AQ96PE3 977 aaPredicted RBP10.03□□□□□ -0.8
SNF8-210ENST00000511214 PNMA5Q96PV4 448 aa10.03□□□□□ -0.8
SNF8-210ENST00000511214 PLIN2Q99541 437 aa10.03□□□□□ -0.8
SNF8-210ENST00000511214 SLC39A2Q9NP94 309 aa10.03□□□□□ -0.8
SNF8-210ENST00000511214 PLCB1Q9NQ66 1216 aa10.03□□□□□ -0.8
SNF8-210ENST00000511214 A1CFQ9NQ94 594 aaKnown RBP10.03□□□□□ -0.8
SNF8-210ENST00000511214 FAM207AQ9NSI2 230 aaPredicted RBP10.03□□□□□ -0.8
SNF8-210ENST00000511214 RBM12Q9NTZ6 932 aaKnown RBP10.03□□□□□ -0.8
SNF8-210ENST00000511214 AIPL1Q9NZN9 384 aa10.03□□□□□ -0.8
SNF8-210ENST00000511214 TMEM59LQ9UK28 342 aa10.03□□□□□ -0.8
SNF8-210ENST00000511214 ATP6V0A2Q9Y487 856 aa10.03□□□□□ -0.8
SNF8-210ENST00000511214 COL4A3BPQ9Y5P4 624 aa10.03□□□□□ -0.8
SNF8-210ENST00000511214 BZW2Q9Y6E2 419 aaKnown RBP10.03□□□□□ -0.8
SNF8-210ENST00000511214 KDM3AQ9Y4C1 1321 aa10.03□□□□□ -0.8
SNF8-210ENST00000511214 COL5A3P25940 1745 aaPredicted RBP10.02□□□□□ -0.8
SNF8-210ENST00000511214 EPHB6O15197 1021 aa10.02□□□□□ -0.81
SNF8-210ENST00000511214 MEFVO15553 781 aaPredicted RBP10.02□□□□□ -0.81
SNF8-210ENST00000511214 HEXIM1O94992 359 aaKnown RBP10.02□□□□□ -0.81
SNF8-210ENST00000511214 USP17L8P0C7I0 530 aa10.02□□□□□ -0.81
SNF8-210ENST00000511214 RASA1P20936 1047 aa10.02□□□□□ -0.81
SNF8-210ENST00000511214 TECP42680 631 aa10.02□□□□□ -0.81
SNF8-210ENST00000511214 DDR1Q08345 913 aa10.02□□□□□ -0.81
SNF8-210ENST00000511214 KCNMA1Q12791 1236 aa10.02□□□□□ -0.81
SNF8-210ENST00000511214 BIRC3Q13489 604 aa10.02□□□□□ -0.81
SNF8-210ENST00000511214 ITPK1Q13572 414 aa10.02□□□□□ -0.81
SNF8-210ENST00000511214 CALCRLQ16602 461 aa10.02□□□□□ -0.81
SNF8-210ENST00000511214 SPDYCQ5MJ68 293 aa10.02□□□□□ -0.81
SNF8-210ENST00000511214 KRT79Q5XKE5 535 aa10.02□□□□□ -0.81
SNF8-210ENST00000511214 C15orf52Q6ZUT6 534 aaKnown RBP10.02□□□□□ -0.81
SNF8-210ENST00000511214 TAX1BP1Q86VP1 789 aa10.02□□□□□ -0.81
SNF8-210ENST00000511214 PRPF38AQ8NAV1 312 aaKnown RBP10.02□□□□□ -0.81
SNF8-210ENST00000511214 TBCKQ8TEA7 893 aa10.02□□□□□ -0.81
SNF8-210ENST00000511214 TAF4BQ92750 862 aa10.02□□□□□ -0.81
SNF8-210ENST00000511214 ARL8AQ96BM9 186 aa10.02□□□□□ -0.81
SNF8-210ENST00000511214 MTMR8Q96EF0 704 aa10.02□□□□□ -0.81
SNF8-210ENST00000511214 ATP6V1G3Q96LB4 118 aa10.02□□□□□ -0.81
SNF8-210ENST00000511214 CCDC43Q96MW1 224 aaKnown RBP10.02□□□□□ -0.81
SNF8-210ENST00000511214 GDAP1L1Q96MZ0 367 aa10.02□□□□□ -0.81
SNF8-210ENST00000511214 ISCUQ9H1K1 167 aa10.02□□□□□ -0.81
SNF8-210ENST00000511214 RIOX1Q9H6W3 641 aa10.02□□□□□ -0.81
SNF8-210ENST00000511214 BMP2KQ9NSY1 1161 aaPredicted RBP10.02□□□□□ -0.81
SNF8-210ENST00000511214 NAV1Q8NEY1 1877 aa10.02□□□□□ -0.81
SNF8-210ENST00000511214 PLIN4Q96Q06 1357 aa10.01□□□□□ -0.81
SNF8-210ENST00000511214 ATAD5Q96QE3 1844 aa10.01□□□□□ -0.81
SNF8-210ENST00000511214 GOLGA6L10A6NI86 522 aa10.01□□□□□ -0.81
SNF8-210ENST00000511214 ZNF233A6NK53 670 aa10.01□□□□□ -0.81
SNF8-210ENST00000511214 CCDC188H7C350 402 aa10.01□□□□□ -0.81
SNF8-210ENST00000511214 TULP1O00294 542 aaPredicted RBP10.01□□□□□ -0.81
SNF8-210ENST00000511214 PPP1R37O75864 691 aa10.01□□□□□ -0.81
SNF8-210ENST00000511214 LDHBP07195 334 aaKnown RBP10.01□□□□□ -0.81
SNF8-210ENST00000511214 GCFC2P16383 781 aaKnown RBP10.01□□□□□ -0.81
SNF8-210ENST00000511214 PLCG2P16885 1265 aa10.01□□□□□ -0.81
SNF8-210ENST00000511214 NR1D1P20393 614 aa10.01□□□□□ -0.81
SNF8-210ENST00000511214 PRDX5P30044 214 aa10.01□□□□□ -0.81
SNF8-210ENST00000511214 LSP1P33241 339 aa10.01□□□□□ -0.81
SNF8-210ENST00000511214 SLC1A4P43007 532 aa10.01□□□□□ -0.81
SNF8-210ENST00000511214 NAP1L1P55209 391 aaKnown RBP10.01□□□□□ -0.81
SNF8-210ENST00000511214 IRX3P78415 501 aaPredicted RBP10.01□□□□□ -0.81
SNF8-210ENST00000511214 SETQ01105 290 aaPredicted RBP10.01□□□□□ -0.81
SNF8-210ENST00000511214 RASSF7Q02833 373 aa10.01□□□□□ -0.81
SNF8-210ENST00000511214 GFPT1Q06210 699 aaPredicted RBP10.01□□□□□ -0.81
SNF8-210ENST00000511214 MTMR3Q13615 1198 aa10.01□□□□□ -0.81
SNF8-210ENST00000511214 PTGISQ16647 500 aa10.01□□□□□ -0.81
SNF8-210ENST00000511214 EDRF1Q3B7T1 1238 aa10.01□□□□□ -0.81
SNF8-210ENST00000511214 FAM83BQ5T0W9 1011 aa10.01□□□□□ -0.81
SNF8-210ENST00000511214 RUFY4Q6ZNE9 571 aa10.01□□□□□ -0.81
SNF8-210ENST00000511214 C16orf86Q6ZW13 317 aa10.01□□□□□ -0.81
SNF8-210ENST00000511214 ARMC9Q7Z3E5 817 aa10.01□□□□□ -0.81
SNF8-210ENST00000511214 CCDC91Q7Z6B0 441 aa10.01□□□□□ -0.81
SNF8-210ENST00000511214 TRIM59Q8IWR1 403 aa10.01□□□□□ -0.81
SNF8-210ENST00000511214 OTUD6BQ8N6M0 293 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms