RNA–Protein interactions for RNA: ENST00000511125.1

SMAD1-209, Transcript of SMAD family member 1, humanhuman

TSL 2

Gene SMAD1, Length 3,293 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-209ENST00000511125 MYPNQ86TC9 1320 aa9.09□□□□□ -0.95
SMAD1-209ENST00000511125 RASSF10A6NK89 507 aa9.09□□□□□ -0.95
SMAD1-209ENST00000511125 CUTAO60888 179 aa9.09□□□□□ -0.95
SMAD1-209ENST00000511125 CCND2P30279 289 aa9.09□□□□□ -0.95
SMAD1-209ENST00000511125 USP11P51784 963 aa9.09□□□□□ -0.95
SMAD1-209ENST00000511125 SP2Q02086 613 aa9.09□□□□□ -0.95
SMAD1-209ENST00000511125 PNOCQ13519 176 aa9.09□□□□□ -0.95
SMAD1-209ENST00000511125 ECM1Q16610 540 aa9.09□□□□□ -0.95
SMAD1-209ENST00000511125 CNNM3Q8NE01 707 aa9.09□□□□□ -0.95
SMAD1-209ENST00000511125 CD99L2Q8TCZ2 262 aa9.09□□□□□ -0.95
SMAD1-209ENST00000511125 PIGOQ8TEQ8 1089 aa9.09□□□□□ -0.95
SMAD1-209ENST00000511125 EHMT1Q9H9B1 1298 aa9.09□□□□□ -0.95
SMAD1-209ENST00000511125 FAM13BQ9NYF5 915 aa9.09□□□□□ -0.95
SMAD1-209ENST00000511125 FBXO40Q9UH90 709 aa9.09□□□□□ -0.95
SMAD1-209ENST00000511125 IGLV3-22A0A075B6J6 115 aa9.08□□□□□ -0.96
SMAD1-209ENST00000511125 POTEB3A0JP26 581 aa9.08□□□□□ -0.96
SMAD1-209ENST00000511125 ATP2A1O14983 1001 aa9.08□□□□□ -0.96
SMAD1-209ENST00000511125 PPP6R2O75170 966 aa9.08□□□□□ -0.96
SMAD1-209ENST00000511125 ELNP15502 786 aa9.08□□□□□ -0.96
SMAD1-209ENST00000511125 CNGA1P29973 690 aa9.08□□□□□ -0.96
SMAD1-209ENST00000511125 CCT6AP40227 531 aaKnown RBP9.08□□□□□ -0.96
SMAD1-209ENST00000511125 ITGB3BPQ13352 177 aaPredicted RBP9.08□□□□□ -0.96
SMAD1-209ENST00000511125 STXBP2Q15833 593 aa9.08□□□□□ -0.96
SMAD1-209ENST00000511125 FAM110CQ1W6H9 321 aa9.08□□□□□ -0.96
SMAD1-209ENST00000511125 POTEBQ6S5H4 581 aa9.08□□□□□ -0.96
SMAD1-209ENST00000511125 C17orf99Q6UX52 265 aa9.08□□□□□ -0.96
SMAD1-209ENST00000511125 CABP7Q86V35 215 aa9.08□□□□□ -0.96
SMAD1-209ENST00000511125 CDK5RAP3Q96JB5 506 aa9.08□□□□□ -0.96
SMAD1-209ENST00000511125 MTMR9Q96QG7 549 aa9.08□□□□□ -0.96
SMAD1-209ENST00000511125 TNMDQ9H2S6 317 aa9.08□□□□□ -0.96
SMAD1-209ENST00000511125 ZHX3Q9H4I2 956 aa9.08□□□□□ -0.96
SMAD1-209ENST00000511125 POTEFA5A3E0 1075 aa9.08□□□□□ -0.96
SMAD1-209ENST00000511125 UNCXA6NJT0 531 aa9.08□□□□□ -0.96
SMAD1-209ENST00000511125 CA12O43570 354 aa9.08□□□□□ -0.96
SMAD1-209ENST00000511125 PRR29P0C7W0 189 aa9.08□□□□□ -0.96
SMAD1-209ENST00000511125 TRIM32Q13049 653 aa9.08□□□□□ -0.96
SMAD1-209ENST00000511125 SNW1Q13573 536 aaKnown RBP9.08□□□□□ -0.96
SMAD1-209ENST00000511125 TMEM266Q2M3C6 531 aa9.08□□□□□ -0.96
SMAD1-209ENST00000511125 POTEGQ6S5H5 508 aa9.08□□□□□ -0.96
SMAD1-209ENST00000511125 VSIG10LQ86VR7 867 aa9.08□□□□□ -0.96
SMAD1-209ENST00000511125 LRRC15Q8TF66 581 aa9.08□□□□□ -0.96
SMAD1-209ENST00000511125 MROH8Q9H579 483 aa9.08□□□□□ -0.96
SMAD1-209ENST00000511125 FLRT1Q9NZU1 646 aa9.08□□□□□ -0.96
SMAD1-209ENST00000511125 KIAA1024Q9UPX6 916 aa9.08□□□□□ -0.96
SMAD1-209ENST00000511125 E9PMD0 336 aa9.07□□□□□ -0.96
SMAD1-209ENST00000511125 BCRP11274 1271 aa9.07□□□□□ -0.96
SMAD1-209ENST00000511125 CMA1P23946 247 aa9.07□□□□□ -0.96
SMAD1-209ENST00000511125 TM4SF4P48230 202 aa9.07□□□□□ -0.96
SMAD1-209ENST00000511125 INHBEP58166 350 aa9.07□□□□□ -0.96
SMAD1-209ENST00000511125 PSMC6P62333 389 aa9.07□□□□□ -0.96
SMAD1-209ENST00000511125 KLHL40Q2TBA0 621 aa9.07□□□□□ -0.96
SMAD1-209ENST00000511125 ATL3Q6DD88 541 aa9.07□□□□□ -0.96
SMAD1-209ENST00000511125 PPP4R3AQ6IN85 833 aa9.07□□□□□ -0.96
SMAD1-209ENST00000511125 DYMQ7RTS9 669 aa9.07□□□□□ -0.96
SMAD1-209ENST00000511125 FAM133AQ8N9E0 248 aa9.07□□□□□ -0.96
SMAD1-209ENST00000511125 TRIM47Q96LD4 638 aa9.07□□□□□ -0.96
SMAD1-209ENST00000511125 NUP62CLQ9H1M0 184 aa9.07□□□□□ -0.96
SMAD1-209ENST00000511125 UNC45AQ9H3U1 944 aa9.07□□□□□ -0.96
SMAD1-209ENST00000511125 C11orf97A0A1B0GVM6 126 aaPredicted RBP9.07□□□□□ -0.96
SMAD1-209ENST00000511125 ARIH2O95376 493 aa9.07□□□□□ -0.96
SMAD1-209ENST00000511125 PLCG1P19174 1290 aa9.07□□□□□ -0.96
SMAD1-209ENST00000511125 MARK3P27448 753 aa9.07□□□□□ -0.96
SMAD1-209ENST00000511125 ADCYAP1R1P41586 468 aa9.07□□□□□ -0.96
SMAD1-209ENST00000511125 STAT6P42226 847 aa9.07□□□□□ -0.96
SMAD1-209ENST00000511125 ZSCAN23Q3MJ62 389 aa9.07□□□□□ -0.96
SMAD1-209ENST00000511125 UTP14CQ5TAP6 766 aaKnown RBP9.07□□□□□ -0.96
SMAD1-209ENST00000511125 RESP18Q5W5W9 173 aa9.07□□□□□ -0.96
SMAD1-209ENST00000511125 ARMCX2Q7L311 632 aa9.07□□□□□ -0.96
SMAD1-209ENST00000511125 KCNK18Q7Z418 384 aa9.07□□□□□ -0.96
SMAD1-209ENST00000511125 ETNPPLQ8TBG4 499 aa9.07□□□□□ -0.96
SMAD1-209ENST00000511125 CRYGNQ8WXF5 182 aa9.07□□□□□ -0.96
SMAD1-209ENST00000511125 FGD4Q96M96 766 aa9.07□□□□□ -0.96
SMAD1-209ENST00000511125 ELP1O95163 1332 aa9.07□□□□□ -0.96
SMAD1-209ENST00000511125 FLT3LGP49771 235 aa9.07□□□□□ -0.96
SMAD1-209ENST00000511125 PRKCZQ05513 592 aa9.07□□□□□ -0.96
SMAD1-209ENST00000511125 FAM160A1Q05DH4 1040 aa9.07□□□□□ -0.96
SMAD1-209ENST00000511125 SEMA3FQ13275 785 aa9.07□□□□□ -0.96
SMAD1-209ENST00000511125 RRAGBQ5VZM2 374 aa9.07□□□□□ -0.96
SMAD1-209ENST00000511125 PCNX4Q63HM2 1172 aa9.07□□□□□ -0.96
SMAD1-209ENST00000511125 NLRX1Q86UT6 975 aa9.07□□□□□ -0.96
SMAD1-209ENST00000511125 TMEM87AQ8NBN3 555 aa9.07□□□□□ -0.96
SMAD1-209ENST00000511125 DYDC2Q96IM9 177 aa9.07□□□□□ -0.96
SMAD1-209ENST00000511125 DDX19AQ9NUU7 478 aaKnown RBP9.07□□□□□ -0.96
SMAD1-209ENST00000511125 ADD3Q9UEY8 706 aaKnown RBP9.07□□□□□ -0.96
SMAD1-209ENST00000511125 MAPK8IP1Q9UQF2 711 aa9.07□□□□□ -0.96
SMAD1-209ENST00000511125 MCM3APO60318 1980 aa9.07□□□□□ -0.96
SMAD1-209ENST00000511125 NPHP3-ACAD11A0A0J9YXS1 232 aa9.06□□□□□ -0.96
SMAD1-209ENST00000511125 BACH1O14867 736 aa9.06□□□□□ -0.96
SMAD1-209ENST00000511125 MED24O75448 989 aa9.06□□□□□ -0.96
SMAD1-209ENST00000511125 C1QTNF8P60827 252 aa9.06□□□□□ -0.96
SMAD1-209ENST00000511125 MCM6Q14566 821 aa9.06□□□□□ -0.96
SMAD1-209ENST00000511125 KRT79Q5XKE5 535 aa9.06□□□□□ -0.96
SMAD1-209ENST00000511125 TRIM50Q86XT4 487 aa9.06□□□□□ -0.96
SMAD1-209ENST00000511125 FMR1NBQ8N0W7 255 aaPredicted RBP9.06□□□□□ -0.96
SMAD1-209ENST00000511125 HPS3Q969F9 1004 aa9.06□□□□□ -0.96
SMAD1-209ENST00000511125 FERMT2Q96AC1 680 aa9.06□□□□□ -0.96
SMAD1-209ENST00000511125 BEGAINQ9BUH8 593 aa9.06□□□□□ -0.96
SMAD1-209ENST00000511125 PFASO15067 1338 aa9.06□□□□□ -0.96
SMAD1-209ENST00000511125 MBD3O95983 291 aa9.06□□□□□ -0.96
SMAD1-209ENST00000511125 TXNP10599 105 aaKnown RBP9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms