RNA–Protein interactions for RNA: ENST00000510906.5

PDPN-209, Transcript of podoplanin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDPN, Length 786 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-209ENST00000510906 IMMTQ16891 758 aaKnown RBP10.09□□□□□ -0.79
PDPN-209ENST00000510906 MUM1L1Q5H9M0 696 aa10.09□□□□□ -0.79
PDPN-209ENST00000510906 SYDE2Q5VT97 1194 aa10.09□□□□□ -0.79
PDPN-209ENST00000510906 MAMDC4Q6UXC1 1216 aa10.09□□□□□ -0.79
PDPN-209ENST00000510906 BTNL9Q6UXG8 535 aa10.09□□□□□ -0.79
PDPN-209ENST00000510906 MSL3Q8N5Y2 521 aaKnown RBP10.09□□□□□ -0.79
PDPN-209ENST00000510906 ARRDC4Q8NCT1 418 aa10.09□□□□□ -0.79
PDPN-209ENST00000510906 TTC14Q96N46 770 aa10.09□□□□□ -0.79
PDPN-209ENST00000510906 TRERF1Q96PN7 1200 aa10.09□□□□□ -0.79
PDPN-209ENST00000510906 RANBP17Q9H2T7 1088 aaKnown RBP10.09□□□□□ -0.79
PDPN-209ENST00000510906 A1CFQ9NQ94 594 aaKnown RBP10.09□□□□□ -0.79
PDPN-209ENST00000510906 XPNPEP3Q9NQH7 507 aa10.09□□□□□ -0.79
PDPN-209ENST00000510906 ZHX1Q9UKY1 873 aaPredicted RBP10.09□□□□□ -0.79
PDPN-209ENST00000510906 CNPY2Q9Y2B0 182 aa10.09□□□□□ -0.79
PDPN-209ENST00000510906 SYNGAP1Q96PV0 1343 aa10.08□□□□□ -0.8
PDPN-209ENST00000510906 ALPK3Q96L96 1907 aa10.08□□□□□ -0.8
PDPN-209ENST00000510906 TMEM229AB2RXF0 380 aa10.08□□□□□ -0.8
PDPN-209ENST00000510906 KBTBD13C9JR72 458 aa10.08□□□□□ -0.8
PDPN-209ENST00000510906 LILRA1O75019 489 aa10.08□□□□□ -0.8
PDPN-209ENST00000510906 PGK1P00558 417 aa10.08□□□□□ -0.8
PDPN-209ENST00000510906 ICAM1P05362 532 aa10.08□□□□□ -0.8
PDPN-209ENST00000510906 SNHG28P0DPA3 235 aa10.08□□□□□ -0.8
PDPN-209ENST00000510906 RARBP10826 455 aa10.08□□□□□ -0.8
PDPN-209ENST00000510906 AKR1A1P14550 325 aa10.08□□□□□ -0.8
PDPN-209ENST00000510906 ADCYAP1R1P41586 468 aa10.08□□□□□ -0.8
PDPN-209ENST00000510906 ZNF543Q08ER8 600 aa10.08□□□□□ -0.8
PDPN-209ENST00000510906 TKFCQ3LXA3 575 aa10.08□□□□□ -0.8
PDPN-209ENST00000510906 TAS1R3Q7RTX0 852 aa10.08□□□□□ -0.8
PDPN-209ENST00000510906 CCDC116Q8IYX3 515 aa10.08□□□□□ -0.8
PDPN-209ENST00000510906 FAM133AQ8N9E0 248 aa10.08□□□□□ -0.8
PDPN-209ENST00000510906 FERMT2Q96AC1 680 aa10.08□□□□□ -0.8
PDPN-209ENST00000510906 MRGPRX2Q96LB1 330 aa10.08□□□□□ -0.8
PDPN-209ENST00000510906 TMPRSS4Q9NRS4 437 aa10.08□□□□□ -0.8
PDPN-209ENST00000510906 CTNNA3Q9UI47 895 aa10.08□□□□□ -0.8
PDPN-209ENST00000510906 CCPG1Q9ULG6 757 aa10.08□□□□□ -0.8
PDPN-209ENST00000510906 EYSQ5T1H1 3165 aa10.08□□□□□ -0.8
PDPN-209ENST00000510906 ASTN1O14525 1302 aa10.07□□□□□ -0.8
PDPN-209ENST00000510906 RAD50Q92878 1312 aa10.07□□□□□ -0.8
PDPN-209ENST00000510906 ADCY6O43306 1168 aa10.07□□□□□ -0.8
PDPN-209ENST00000510906 GOLGA8HP0CJ92 632 aa10.07□□□□□ -0.8
PDPN-209ENST00000510906 WEE1P30291 646 aa10.07□□□□□ -0.8
PDPN-209ENST00000510906 RTP1P59025 263 aa10.07□□□□□ -0.8
PDPN-209ENST00000510906 PTH1RQ03431 593 aa10.07□□□□□ -0.8
PDPN-209ENST00000510906 ACVR2BQ13705 512 aa10.07□□□□□ -0.8
PDPN-209ENST00000510906 NSMFQ6X4W1 530 aa10.07□□□□□ -0.8
PDPN-209ENST00000510906 ARMCX2Q7L311 632 aa10.07□□□□□ -0.8
PDPN-209ENST00000510906 IQCA1Q86XH1 822 aa10.07□□□□□ -0.8
PDPN-209ENST00000510906 DGKHQ86XP1 1220 aa10.07□□□□□ -0.8
PDPN-209ENST00000510906 CCDC144CPQ8IYA2 1237 aa10.07□□□□□ -0.8
PDPN-209ENST00000510906 ENAHQ8N8S7 591 aaPredicted RBP10.07□□□□□ -0.8
PDPN-209ENST00000510906 ZSCAN10Q96SZ4 725 aaPredicted RBP10.07□□□□□ -0.8
PDPN-209ENST00000510906 GDF15Q99988 308 aa10.07□□□□□ -0.8
PDPN-209ENST00000510906 CPVLQ9H3G5 476 aa10.07□□□□□ -0.8
PDPN-209ENST00000510906 ZNF358Q9NW07 568 aa10.07□□□□□ -0.8
PDPN-209ENST00000510906 CYP39A1Q9NYL5 469 aa10.07□□□□□ -0.8
PDPN-209ENST00000510906 ZSWIM5Q9P217 1185 aa10.07□□□□□ -0.8
PDPN-209ENST00000510906 FAM184BQ9ULE4 1060 aa10.07□□□□□ -0.8
PDPN-209ENST00000510906 DDX49Q9Y6V7 483 aaKnown RBP10.07□□□□□ -0.8
PDPN-209ENST00000510906 TNKSO95271 1327 aa10.07□□□□□ -0.8
PDPN-209ENST00000510906 FRMPD3Q5JV73 1810 aa10.06□□□□□ -0.8
PDPN-209ENST00000510906 NFIBO00712 420 aa10.06□□□□□ -0.8
PDPN-209ENST00000510906 SGSM2O43147 1006 aa10.06□□□□□ -0.8
PDPN-209ENST00000510906 PRMT3O60678 531 aa10.06□□□□□ -0.8
PDPN-209ENST00000510906 ADAMTS4O75173 837 aa10.06□□□□□ -0.8
PDPN-209ENST00000510906 NR3C2P08235 984 aa10.06□□□□□ -0.8
PDPN-209ENST00000510906 MAGEA10P43363 369 aaPredicted RBP10.06□□□□□ -0.8
PDPN-209ENST00000510906 NT5C2P49902 561 aa10.06□□□□□ -0.8
PDPN-209ENST00000510906 PPP1R26Q5T8A7 1209 aaPredicted RBP10.06□□□□□ -0.8
PDPN-209ENST00000510906 SLC39A5Q6ZMH5 540 aa10.06□□□□□ -0.8
PDPN-209ENST00000510906 RNF180Q86T96 592 aa10.06□□□□□ -0.8
PDPN-209ENST00000510906 SKAP1Q86WV1 359 aa10.06□□□□□ -0.8
PDPN-209ENST00000510906 TSEN2Q8NCE0 465 aaKnown RBP10.06□□□□□ -0.8
PDPN-209ENST00000510906 RUFY2Q8WXA3 655 aa10.06□□□□□ -0.8
PDPN-209ENST00000510906 ANKS1AQ92625 1134 aa10.06□□□□□ -0.8
PDPN-209ENST00000510906 PURBQ96QR8 312 aaKnown RBP10.06□□□□□ -0.8
PDPN-209ENST00000510906 KRT23Q9C075 422 aa10.06□□□□□ -0.8
PDPN-209ENST00000510906 UBA5Q9GZZ9 404 aa10.06□□□□□ -0.8
PDPN-209ENST00000510906 KATNBL1Q9H079 304 aa10.06□□□□□ -0.8
PDPN-209ENST00000510906 ABHD16BQ9H3Z7 469 aa10.06□□□□□ -0.8
PDPN-209ENST00000510906 KAT14Q9H8E8 782 aa10.06□□□□□ -0.8
PDPN-209ENST00000510906 CYLDQ9NQC7 956 aa10.06□□□□□ -0.8
PDPN-209ENST00000510906 PHF24Q9UPV7 400 aa10.06□□□□□ -0.8
PDPN-209ENST00000510906 ATP11BQ9Y2G3 1177 aa10.06□□□□□ -0.8
PDPN-209ENST00000510906 TAF6LQ9Y6J9 622 aa10.06□□□□□ -0.8
PDPN-209ENST00000510906 SYNRGQ9UMZ2 1314 aa10.06□□□□□ -0.8
PDPN-209ENST00000510906 MYADML2A6NDP7 307 aa10.05□□□□□ -0.8
PDPN-209ENST00000510906 CYP21A2P08686 494 aa10.05□□□□□ -0.8
PDPN-209ENST00000510906 BAATQ14032 418 aaPredicted RBP10.05□□□□□ -0.8
PDPN-209ENST00000510906 SNX17Q15036 470 aa10.05□□□□□ -0.8
PDPN-209ENST00000510906 CCDC144BQ3MJ40 725 aa10.05□□□□□ -0.8
PDPN-209ENST00000510906 TRIM60Q495X7 471 aa10.05□□□□□ -0.8
PDPN-209ENST00000510906 CCDC178Q5BJE1 867 aa10.05□□□□□ -0.8
PDPN-209ENST00000510906 GPATCH4Q5T3I0 446 aaKnown RBP10.05□□□□□ -0.8
PDPN-209ENST00000510906 CYB5R4Q7L1T6 521 aa10.05□□□□□ -0.8
PDPN-209ENST00000510906 SERBP1Q8NC51 408 aaKnown RBP eCLIP10.05□□□□□ -0.8
PDPN-209ENST00000510906 CLEC4DQ8WXI8 215 aa10.05□□□□□ -0.8
PDPN-209ENST00000510906 UBAC1Q9BSL1 405 aa10.05□□□□□ -0.8
PDPN-209ENST00000510906 CNNM2Q9H8M5 875 aa10.05□□□□□ -0.8
PDPN-209ENST00000510906 ZNFX1Q9P2E3 1918 aaKnown RBP10.05□□□□□ -0.8
PDPN-209ENST00000510906 C11orf97A0A1B0GVM6 126 aaPredicted RBP10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms