RNA–Protein interactions for RNA: ENST00000510866.5

KDM3B-207, Transcript of lysine demethylase 3B, humanhuman

TSL 1 (best)

Gene KDM3B, Length 6,324 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3B-207ENST00000510866 PLA2G4BP0C869 781 aa7.84□□□□□ -1.15
KDM3B-207ENST00000510866 USP17L24Q0WX57 530 aa7.84□□□□□ -1.15
KDM3B-207ENST00000510866 C7orf31Q8N865 590 aa7.84□□□□□ -1.15
KDM3B-207ENST00000510866 RAET1EQ8TD07 263 aa7.84□□□□□ -1.15
KDM3B-207ENST00000510866 MICAL1Q8TDZ2 1067 aa7.84□□□□□ -1.15
KDM3B-207ENST00000510866 XPO4Q9C0E2 1151 aaKnown RBP7.84□□□□□ -1.15
KDM3B-207ENST00000510866 HERC5Q9UII4 1024 aaKnown RBP7.84□□□□□ -1.15
KDM3B-207ENST00000510866 THAP12O43422 761 aa7.84□□□□□ -1.16
KDM3B-207ENST00000510866 KIF11P52732 1056 aa7.84□□□□□ -1.16
KDM3B-207ENST00000510866 HMGCS2P54868 508 aa7.84□□□□□ -1.16
KDM3B-207ENST00000510866 IRX5P78411 483 aaPredicted RBP7.84□□□□□ -1.16
KDM3B-207ENST00000510866 MTMR2Q13614 643 aa7.84□□□□□ -1.16
KDM3B-207ENST00000510866 EXOC3L4Q17RC7 722 aa7.84□□□□□ -1.16
KDM3B-207ENST00000510866 ANGEL2Q5VTE6 544 aaKnown RBP7.84□□□□□ -1.16
KDM3B-207ENST00000510866 KLHL7Q8IXQ5 586 aa7.84□□□□□ -1.16
KDM3B-207ENST00000510866 NSUN6Q8TEA1 469 aaKnown RBP7.84□□□□□ -1.16
KDM3B-207ENST00000510866 TCP11Q8WWU5 503 aa7.84□□□□□ -1.16
KDM3B-207ENST00000510866 CNOT6LQ96LI5 555 aaKnown RBP7.84□□□□□ -1.16
KDM3B-207ENST00000510866 STK17AQ9UEE5 414 aa7.84□□□□□ -1.16
KDM3B-207ENST00000510866 TRIM28Q13263 835 aaKnown RBP7.83□□□□□ -1.16
KDM3B-207ENST00000510866 TTLL4Q14679 1199 aa7.83□□□□□ -1.16
KDM3B-207ENST00000510866 SF3B3Q15393 1217 aaKnown RBP7.83□□□□□ -1.16
KDM3B-207ENST00000510866 BSPRYQ5W0U4 402 aa7.83□□□□□ -1.16
KDM3B-207ENST00000510866 CCDC105Q8IYK2 499 aa7.83□□□□□ -1.16
KDM3B-207ENST00000510866 RSAD2Q8WXG1 361 aa7.83□□□□□ -1.16
KDM3B-207ENST00000510866 AMFRQ9UKV5 643 aa7.83□□□□□ -1.16
KDM3B-207ENST00000510866 GMPSP49915 693 aaPredicted RBP7.83□□□□□ -1.16
KDM3B-207ENST00000510866 ZBTB16Q05516 673 aa7.83□□□□□ -1.16
KDM3B-207ENST00000510866 NFX1Q12986 1120 aaKnown RBP7.83□□□□□ -1.16
KDM3B-207ENST00000510866 FAM186BQ8IYM0 893 aa7.83□□□□□ -1.16
KDM3B-207ENST00000510866 BANK1Q8NDB2 785 aa7.83□□□□□ -1.16
KDM3B-207ENST00000510866 MAIP1Q8WWC4 291 aa7.83□□□□□ -1.16
KDM3B-207ENST00000510866 TBC1D31Q96DN5 1066 aa7.83□□□□□ -1.16
KDM3B-207ENST00000510866 AIFM3Q96NN9 605 aa7.83□□□□□ -1.16
KDM3B-207ENST00000510866 PARVGQ9HBI0 331 aa7.83□□□□□ -1.16
KDM3B-207ENST00000510866 GOLGA6CA6NDK9 693 aa7.83□□□□□ -1.16
KDM3B-207ENST00000510866 GOLGA6BA6NDN3 693 aa7.83□□□□□ -1.16
KDM3B-207ENST00000510866 GOLGA6DP0CG33 693 aa7.83□□□□□ -1.16
KDM3B-207ENST00000510866 POLR2BP30876 1174 aaKnown RBP7.83□□□□□ -1.16
KDM3B-207ENST00000510866 CATSPER4Q7RTX7 472 aa7.83□□□□□ -1.16
KDM3B-207ENST00000510866 SLC16A10Q8TF71 515 aa7.83□□□□□ -1.16
KDM3B-207ENST00000510866 ACAD9Q9H845 621 aa7.83□□□□□ -1.16
KDM3B-207ENST00000510866 RPF1Q9H9Y2 349 aaKnown RBP7.83□□□□□ -1.16
KDM3B-207ENST00000510866 GOLGA6AQ9NYA3 693 aa7.83□□□□□ -1.16
KDM3B-207ENST00000510866 GGA3Q9NZ52 723 aa7.83□□□□□ -1.16
KDM3B-207ENST00000510866 ATP8B3O60423 1300 aa7.83□□□□□ -1.16
KDM3B-207ENST00000510866 F5H6K3 240 aa7.83□□□□□ -1.16
KDM3B-207ENST00000510866 TNPO2O14787 897 aaKnown RBP7.83□□□□□ -1.16
KDM3B-207ENST00000510866 CDC25AP30304 524 aa7.83□□□□□ -1.16
KDM3B-207ENST00000510866 DDIT3P35638 169 aa7.83□□□□□ -1.16
KDM3B-207ENST00000510866 PTK2Q05397 1052 aa7.83□□□□□ -1.16
KDM3B-207ENST00000510866 KLRC3Q07444 240 aa7.83□□□□□ -1.16
KDM3B-207ENST00000510866 CLUL1Q15846 466 aa7.83□□□□□ -1.16
KDM3B-207ENST00000510866 POLR3EQ9NVU0 708 aa7.83□□□□□ -1.16
KDM3B-207ENST00000510866 PCDHB6Q9Y5E3 794 aa7.83□□□□□ -1.16
KDM3B-207ENST00000510866 NTSR2O95665 410 aa7.83□□□□□ -1.16
KDM3B-207ENST00000510866 MYO1EQ12965 1108 aa7.83□□□□□ -1.16
KDM3B-207ENST00000510866 PKP1Q13835 747 aa7.83□□□□□ -1.16
KDM3B-207ENST00000510866 NECTIN1Q15223 517 aa7.83□□□□□ -1.16
KDM3B-207ENST00000510866 LONRF2Q1L5Z9 754 aa7.83□□□□□ -1.16
KDM3B-207ENST00000510866 SPATA1Q5VX52 437 aa7.83□□□□□ -1.16
KDM3B-207ENST00000510866 ADGRF4Q8IZF3 695 aa7.83□□□□□ -1.16
KDM3B-207ENST00000510866 ZNF70Q9UC06 446 aaPredicted RBP7.83□□□□□ -1.16
KDM3B-207ENST00000510866 DAGLAQ9Y4D2 1042 aa7.83□□□□□ -1.16
KDM3B-207ENST00000510866 USP42Q9H9J4 1324 aaKnown RBP7.82□□□□□ -1.16
KDM3B-207ENST00000510866 PLCG1P19174 1290 aa7.82□□□□□ -1.16
KDM3B-207ENST00000510866 PPP2R5CQ13362 524 aa7.82□□□□□ -1.16
KDM3B-207ENST00000510866 GRM4Q14833 912 aa7.82□□□□□ -1.16
KDM3B-207ENST00000510866 RSRC2Q7L4I2 434 aaKnown RBP7.82□□□□□ -1.16
KDM3B-207ENST00000510866 NME8Q8N427 588 aa7.82□□□□□ -1.16
KDM3B-207ENST00000510866 EEF2KMTQ96G04 330 aa7.82□□□□□ -1.16
KDM3B-207ENST00000510866 TSKSQ9UJT2 592 aa7.82□□□□□ -1.16
KDM3B-207ENST00000510866 NRXN1Q9ULB1 1477 aa7.82□□□□□ -1.16
KDM3B-207ENST00000510866 ARHGEF37A1IGU5 675 aa7.82□□□□□ -1.16
KDM3B-207ENST00000510866 TYW5A2RUC4 315 aaKnown RBP7.82□□□□□ -1.16
KDM3B-207ENST00000510866 AKR1B1P15121 316 aa7.82□□□□□ -1.16
KDM3B-207ENST00000510866 ALDH3A1P30838 453 aa7.82□□□□□ -1.16
KDM3B-207ENST00000510866 NSFP46459 744 aaKnown RBP7.82□□□□□ -1.16
KDM3B-207ENST00000510866 PRELPP51888 382 aa7.82□□□□□ -1.16
KDM3B-207ENST00000510866 TAF1CQ15572 869 aaPredicted RBP7.82□□□□□ -1.16
KDM3B-207ENST00000510866 USP17L6PQ6QN14 398 aa7.82□□□□□ -1.16
KDM3B-207ENST00000510866 PDZD4Q76G19 769 aaPredicted RBP7.82□□□□□ -1.16
KDM3B-207ENST00000510866 ENAHQ8N8S7 591 aaPredicted RBP7.82□□□□□ -1.16
KDM3B-207ENST00000510866 FAM167AQ96KS9 214 aa7.82□□□□□ -1.16
KDM3B-207ENST00000510866 TIGD1Q96MW7 591 aa7.82□□□□□ -1.16
KDM3B-207ENST00000510866 MSTO1Q9BUK6 570 aa7.82□□□□□ -1.16
KDM3B-207ENST00000510866 TRIM7Q9C029 511 aa7.82□□□□□ -1.16
KDM3B-207ENST00000510866 KIF9Q9HAQ2 790 aa7.82□□□□□ -1.16
KDM3B-207ENST00000510866 NXF1Q9UBU9 619 aaKnown RBP7.82□□□□□ -1.16
KDM3B-207ENST00000510866 KCNH4Q9UQ05 1017 aa7.82□□□□□ -1.16
KDM3B-207ENST00000510866 ARHGAP6O43182 974 aa7.82□□□□□ -1.16
KDM3B-207ENST00000510866 AFPP02771 609 aaKnown RBP7.82□□□□□ -1.16
KDM3B-207ENST00000510866 ANXA13P27216 316 aa7.82□□□□□ -1.16
KDM3B-207ENST00000510866 COPB2P35606 906 aa7.82□□□□□ -1.16
KDM3B-207ENST00000510866 STAT3P40763 770 aa7.82□□□□□ -1.16
KDM3B-207ENST00000510866 DSTYKQ6XUX3 929 aa7.82□□□□□ -1.16
KDM3B-207ENST00000510866 ATG9AQ7Z3C6 839 aa7.82□□□□□ -1.16
KDM3B-207ENST00000510866 GRAMD1CQ8IYS0 662 aa7.82□□□□□ -1.16
KDM3B-207ENST00000510866 PRPF38AQ8NAV1 312 aaKnown RBP7.82□□□□□ -1.16
KDM3B-207ENST00000510866 ATP6V0A4Q9HBG4 840 aa7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms