RNA–Protein interactions for RNA: ENST00000510737.1

USP53-206, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 5

Gene USP53, Length 534 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-206ENST00000510737 DCP2Q8IU60 420 aaKnown RBP10.64□□□□□ -0.71
USP53-206ENST00000510737 ADAMTS17Q8TE56 1095 aa10.64□□□□□ -0.71
USP53-206ENST00000510737 BTN2A2Q8WVV5 523 aa10.64□□□□□ -0.71
USP53-206ENST00000510737 RBM15Q96T37 977 aaKnown RBP eCLIP10.64□□□□□ -0.71
USP53-206ENST00000510737 FBXL7Q9UJT9 491 aa10.64□□□□□ -0.71
USP53-206ENST00000510737 BIVM-ERCC5R4GMW8 1640 aa10.63□□□□□ -0.71
USP53-206ENST00000510737 K7ESM1 405 aa10.63□□□□□ -0.71
USP53-206ENST00000510737 THBS2P35442 1172 aa10.63□□□□□ -0.71
USP53-206ENST00000510737 ZNF143P52747 638 aaPredicted RBP10.63□□□□□ -0.71
USP53-206ENST00000510737 POMZP3Q6PJE2 187 aa10.63□□□□□ -0.71
USP53-206ENST00000510737 PPP1R14AQ96A00 147 aa10.63□□□□□ -0.71
USP53-206ENST00000510737 INPP5FQ9Y2H2 1132 aa10.63□□□□□ -0.71
USP53-206ENST00000510737 KDM5BQ9UGL1 1544 aa10.63□□□□□ -0.71
USP53-206ENST00000510737 B2RBV5 119 aa10.62□□□□□ -0.71
USP53-206ENST00000510737 NOP56O00567 594 aaKnown RBP10.62□□□□□ -0.71
USP53-206ENST00000510737 NCAPHQ15003 741 aa10.62□□□□□ -0.71
USP53-206ENST00000510737 ETV3LQ6ZN32 361 aa10.62□□□□□ -0.71
USP53-206ENST00000510737 STRIP2Q9ULQ0 834 aa10.62□□□□□ -0.71
USP53-206ENST00000510737 BCORL1Q5H9F3 1711 aa10.61□□□□□ -0.71
USP53-206ENST00000510737 CD109Q6YHK3 1445 aa10.61□□□□□ -0.71
USP53-206ENST00000510737 ATF4P18848 351 aaPredicted RBP10.61□□□□□ -0.71
USP53-206ENST00000510737 SF1Q15637 639 aaKnown RBP10.61□□□□□ -0.71
USP53-206ENST00000510737 C6orf15Q6UXA7 325 aaPredicted RBP10.61□□□□□ -0.71
USP53-206ENST00000510737 TTLL7Q6ZT98 887 aa10.61□□□□□ -0.71
USP53-206ENST00000510737 CRACR2BQ8N4Y2 399 aaPredicted RBP10.61□□□□□ -0.71
USP53-206ENST00000510737 KREMEN2Q8NCW0 462 aa10.61□□□□□ -0.71
USP53-206ENST00000510737 CNOT11Q9UKZ1 510 aaKnown RBP10.61□□□□□ -0.71
USP53-206ENST00000510737 PALD1Q9ULE6 856 aa10.61□□□□□ -0.71
USP53-206ENST00000510737 MAGI3Q5TCQ9 1506 aa10.61□□□□□ -0.71
USP53-206ENST00000510737 ZCCHC11Q5TAX3 1644 aaKnown RBP10.61□□□□□ -0.71
USP53-206ENST00000510737 SMAD7O15105 426 aaKnown RBP10.6□□□□□ -0.71
USP53-206ENST00000510737 ITGB3P05106 788 aa10.6□□□□□ -0.71
USP53-206ENST00000510737 CD300LDQ6UXZ3 194 aa10.6□□□□□ -0.71
USP53-206ENST00000510737 Q8N1Y9 231 aa10.6□□□□□ -0.71
USP53-206ENST00000510737 AP5M1Q9H0R1 490 aa10.6□□□□□ -0.71
USP53-206ENST00000510737 MRVI1Q9Y6F6 885 aa10.6□□□□□ -0.71
USP53-206ENST00000510737 ITGAVP06756 1048 aa10.59□□□□□ -0.71
USP53-206ENST00000510737 INSRRP14616 1297 aa10.59□□□□□ -0.71
USP53-206ENST00000510737 RPL13P26373 211 aaKnown RBP10.59□□□□□ -0.71
USP53-206ENST00000510737 ITGA1P56199 1179 aa10.59□□□□□ -0.71
USP53-206ENST00000510737 PRSS53Q2L4Q9 553 aa10.59□□□□□ -0.71
USP53-206ENST00000510737 PRR31Q5SQ13 230 aa10.59□□□□□ -0.71
USP53-206ENST00000510737 KYQ8NBH2 561 aa10.59□□□□□ -0.71
USP53-206ENST00000510737 SEC14L1Q92503 715 aa10.59□□□□□ -0.71
USP53-206ENST00000510737 SMARCA5O60264 1052 aaPredicted RBP10.58□□□□□ -0.72
USP53-206ENST00000510737 BCL6P41182 706 aa10.58□□□□□ -0.72
USP53-206ENST00000510737 STAT5AP42229 794 aa10.58□□□□□ -0.72
USP53-206ENST00000510737 SLC6A11P48066 632 aa10.58□□□□□ -0.72
USP53-206ENST00000510737 ZXDCQ2QGD7 858 aaPredicted RBP10.58□□□□□ -0.72
USP53-206ENST00000510737 ZNF227Q86WZ6 799 aa10.58□□□□□ -0.72
USP53-206ENST00000510737 MICAL1Q8TDZ2 1067 aa10.58□□□□□ -0.72
USP53-206ENST00000510737 TIMM13Q9Y5L4 95 aaPredicted RBP10.58□□□□□ -0.72
USP53-206ENST00000510737 X6R8D5 127 aa10.58□□□□□ -0.72
USP53-206ENST00000510737 CFAP43Q8NDM7 1665 aa10.57□□□□□ -0.72
USP53-206ENST00000510737 NAT2P11245 290 aa10.57□□□□□ -0.72
USP53-206ENST00000510737 CR1LQ2VPA4 569 aa10.57□□□□□ -0.72
USP53-206ENST00000510737 RGL3Q3MIN7 710 aa10.57□□□□□ -0.72
USP53-206ENST00000510737 MRM1Q6IN84 353 aaKnown RBP10.57□□□□□ -0.72
USP53-206ENST00000510737 DENND5AQ6IQ26 1287 aa10.57□□□□□ -0.72
USP53-206ENST00000510737 CEP68Q76N32 757 aa10.57□□□□□ -0.72
USP53-206ENST00000510737 MILR1Q7Z6M3 343 aa10.57□□□□□ -0.72
USP53-206ENST00000510737 RIOX2Q8IUF8 465 aa10.57□□□□□ -0.72
USP53-206ENST00000510737 KRTAP3-1Q9BYR8 98 aa10.57□□□□□ -0.72
USP53-206ENST00000510737 RIMS1Q86UR5 1692 aaKnown RBP10.57□□□□□ -0.72
USP53-206ENST00000510737 WDR7Q9Y4E6 1490 aa10.56□□□□□ -0.72
USP53-206ENST00000510737 SCG5P05408 212 aa10.56□□□□□ -0.72
USP53-206ENST00000510737 MAGEA10P43363 369 aaPredicted RBP10.56□□□□□ -0.72
USP53-206ENST00000510737 RPL11P62913 178 aaKnown RBP10.56□□□□□ -0.72
USP53-206ENST00000510737 FAM178BQ8IXR5 827 aa10.56□□□□□ -0.72
USP53-206ENST00000510737 FAM126BQ8IXS8 530 aa10.56□□□□□ -0.72
USP53-206ENST00000510737 RCBTB1Q8NDN9 531 aa10.56□□□□□ -0.72
USP53-206ENST00000510737 CCSER2Q9H7U1 834 aa10.56□□□□□ -0.72
USP53-206ENST00000510737 ARID4BQ4LE39 1312 aaPredicted RBP10.56□□□□□ -0.72
USP53-206ENST00000510737 RAPGEF3O95398 923 aa10.55□□□□□ -0.72
USP53-206ENST00000510737 LCP1P13796 627 aa10.55□□□□□ -0.72
USP53-206ENST00000510737 ECI1P42126 302 aa10.55□□□□□ -0.72
USP53-206ENST00000510737 TBC1D10BQ4KMP7 808 aaPredicted RBP10.55□□□□□ -0.72
USP53-206ENST00000510737 E4F1Q66K89 784 aaPredicted RBP10.55□□□□□ -0.72
USP53-206ENST00000510737 DIO2Q92813 273 aa10.55□□□□□ -0.72
USP53-206ENST00000510737 ARAP3Q8WWN8 1544 aa10.54□□□□□ -0.72
USP53-206ENST00000510737 ADAM17P78536 824 aa10.54□□□□□ -0.72
USP53-206ENST00000510737 ADAM9Q13443 819 aa10.54□□□□□ -0.72
USP53-206ENST00000510737 ZNF827Q17R98 1081 aa10.54□□□□□ -0.72
USP53-206ENST00000510737 MROH9Q5TGP6 573 aa10.54□□□□□ -0.72
USP53-206ENST00000510737 LARP1BQ659C4 914 aaKnown RBP10.54□□□□□ -0.72
USP53-206ENST00000510737 MCTP2Q6DN12 878 aa10.54□□□□□ -0.72
USP53-206ENST00000510737 IQCEQ6IPM2 695 aa10.54□□□□□ -0.72
USP53-206ENST00000510737 SUSD5O60279 629 aa10.53□□□□□ -0.72
USP53-206ENST00000510737 CAPNS1P04632 268 aa10.53□□□□□ -0.72
USP53-206ENST00000510737 SNRPB2P08579 225 aaKnown RBP10.53□□□□□ -0.72
USP53-206ENST00000510737 HOXC12P31275 282 aa10.53□□□□□ -0.72
USP53-206ENST00000510737 PUM1Q14671 1186 aaKnown RBP eCLIP10.53□□□□□ -0.72
USP53-206ENST00000510737 TESK1Q15569 626 aa10.53□□□□□ -0.72
USP53-206ENST00000510737 SV2CQ496J9 727 aa10.53□□□□□ -0.72
USP53-206ENST00000510737 TXNDC5Q8NBS9 432 aaKnown RBP10.53□□□□□ -0.72
USP53-206ENST00000510737 TRMT2BQ96GJ1 504 aaKnown RBP10.53□□□□□ -0.72
USP53-206ENST00000510737 SSBP3Q9BWW4 388 aaPredicted RBP10.53□□□□□ -0.72
USP53-206ENST00000510737 ACTR10Q9NZ32 417 aa10.53□□□□□ -0.72
USP53-206ENST00000510737 INVSQ9Y283 1065 aa10.53□□□□□ -0.72
USP53-206ENST00000510737 DISP1Q96F81 1524 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms