RNA–Protein interactions for RNA: ENST00000510377.5

USP38-202, Transcript of ubiquitin specific peptidase 38, humanhuman

TSL 1 (best) BASIC

Gene USP38, Length 4,135 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-202ENST00000510377 CUL5Q93034 780 aa16.34■□□□□ 0.21
USP38-202ENST00000510377 MTA3Q9BTC8 594 aa16.34■□□□□ 0.21
USP38-202ENST00000510377 NRXN3Q9Y4C0 1643 aa16.34■□□□□ 0.21
USP38-202ENST00000510377 H2AFZP0C0S5 128 aa16.34■□□□□ 0.21
USP38-202ENST00000510377 PPP1R7Q15435 360 aa16.34■□□□□ 0.21
USP38-202ENST00000510377 H2AFVQ71UI9 128 aa16.34■□□□□ 0.21
USP38-202ENST00000510377 OR2W6PQ8NHA6 318 aa16.34■□□□□ 0.21
USP38-202ENST00000510377 TBC1D31Q96DN5 1066 aa16.34■□□□□ 0.21
USP38-202ENST00000510377 IQCDQ96DY2 449 aa16.34■□□□□ 0.21
USP38-202ENST00000510377 NYXQ9GZU5 481 aa16.34■□□□□ 0.21
USP38-202ENST00000510377 DDX47Q9H0S4 455 aaKnown RBP16.34■□□□□ 0.21
USP38-202ENST00000510377 NUCKS1Q9H1E3 243 aaKnown RBP16.34■□□□□ 0.21
USP38-202ENST00000510377 RASAL2Q9UJF2 1139 aa16.34■□□□□ 0.21
USP38-202ENST00000510377 LAD1O00515 517 aa16.33■□□□□ 0.21
USP38-202ENST00000510377 TDP2O95551 362 aa16.33■□□□□ 0.21
USP38-202ENST00000510377 MYL1P05976 194 aa16.33■□□□□ 0.21
USP38-202ENST00000510377 HLA-DOAP06340 250 aa16.33■□□□□ 0.21
USP38-202ENST00000510377 ACTN3Q08043 901 aaPredicted RBP16.33■□□□□ 0.21
USP38-202ENST00000510377 FAM83BQ5T0W9 1011 aa16.33■□□□□ 0.21
USP38-202ENST00000510377 GALNT17Q6IS24 598 aa16.33■□□□□ 0.21
USP38-202ENST00000510377 HS2ST1Q7LGA3 356 aa16.33■□□□□ 0.21
USP38-202ENST00000510377 GIMAP8Q8ND71 665 aaPredicted RBP16.33■□□□□ 0.21
USP38-202ENST00000510377 CLIC2O15247 247 aa16.33■□□□□ 0.2
USP38-202ENST00000510377 RHOBTB3O94955 611 aa16.33■□□□□ 0.2
USP38-202ENST00000510377 ZNF772Q68DY9 489 aaPredicted RBP16.33■□□□□ 0.2
USP38-202ENST00000510377 DPP8Q6V1X1 898 aaPredicted RBP16.33■□□□□ 0.2
USP38-202ENST00000510377 ZIM3Q96PE6 472 aa16.33■□□□□ 0.2
USP38-202ENST00000510377 CTTNBP2NLQ9P2B4 639 aa16.33■□□□□ 0.2
USP38-202ENST00000510377 PDS5AQ29RF7 1337 aaKnown RBP16.33■□□□□ 0.2
USP38-202ENST00000510377 ZSCAN5CA6NGD5 496 aaPredicted RBP16.33■□□□□ 0.2
USP38-202ENST00000510377 EIF3HO15372 352 aaKnown RBP eCLIP16.33■□□□□ 0.2
USP38-202ENST00000510377 RPL13P26373 211 aaKnown RBP16.33■□□□□ 0.2
USP38-202ENST00000510377 DHX9Q08211 1270 aaKnown RBP16.33■□□□□ 0.2
USP38-202ENST00000510377 SH2D4AQ9H788 454 aa16.33■□□□□ 0.2
USP38-202ENST00000510377 MAGEF1Q9HAY2 307 aa16.33■□□□□ 0.2
USP38-202ENST00000510377 RCCD1A6NED2 376 aa16.32■□□□□ 0.2
USP38-202ENST00000510377 RPSAP08865 295 aaKnown RBP16.32■□□□□ 0.2
USP38-202ENST00000510377 CETN1Q12798 172 aa16.32■□□□□ 0.2
USP38-202ENST00000510377 KCNB1Q14721 858 aa16.32■□□□□ 0.2
USP38-202ENST00000510377 PRR16Q569H4 304 aa16.32■□□□□ 0.2
USP38-202ENST00000510377 DGKHQ86XP1 1220 aa16.32■□□□□ 0.2
USP38-202ENST00000510377 SLCO1A2P46721 670 aa16.32■□□□□ 0.2
USP38-202ENST00000510377 EXOC3L4Q17RC7 722 aa16.32■□□□□ 0.2
USP38-202ENST00000510377 KRT27Q7Z3Y8 459 aa16.32■□□□□ 0.2
USP38-202ENST00000510377 AMFRQ9UKV5 643 aa16.32■□□□□ 0.2
USP38-202ENST00000510377 ZBTB21Q9ULJ3 1066 aa16.32■□□□□ 0.2
USP38-202ENST00000510377 CLTAP09496 248 aa16.32■□□□□ 0.2
USP38-202ENST00000510377 KLRK1P26718 216 aa16.32■□□□□ 0.2
USP38-202ENST00000510377 CYP2J2P51589 502 aa16.32■□□□□ 0.2
USP38-202ENST00000510377 CLNS1AP54105 237 aaKnown RBP16.32■□□□□ 0.2
USP38-202ENST00000510377 MFSD14BQ5SR56 506 aa16.32■□□□□ 0.2
USP38-202ENST00000510377 DDX42Q86XP3 938 aaKnown RBP eCLIP16.32■□□□□ 0.2
USP38-202ENST00000510377 MRRFQ96E11 262 aaKnown RBP16.32■□□□□ 0.2
USP38-202ENST00000510377 DNAJC7Q99615 494 aa16.32■□□□□ 0.2
USP38-202ENST00000510377 STK32BQ9NY57 414 aa16.32■□□□□ 0.2
USP38-202ENST00000510377 SERPING1P05155 500 aa16.31■□□□□ 0.2
USP38-202ENST00000510377 GKAP1Q5VSY0 366 aaPredicted RBP16.31■□□□□ 0.2
USP38-202ENST00000510377 DNAAF5Q86Y56 855 aa16.31■□□□□ 0.2
USP38-202ENST00000510377 PSTPIP2Q9H939 334 aa16.31■□□□□ 0.2
USP38-202ENST00000510377 DNM3Q9UQ16 869 aa16.31■□□□□ 0.2
USP38-202ENST00000510377 TACC3Q9Y6A5 838 aa16.31■□□□□ 0.2
USP38-202ENST00000510377 RGPD8O14715 1765 aaPredicted RBP16.31■□□□□ 0.2
USP38-202ENST00000510377 TTI2Q6NXR4 508 aa16.31■□□□□ 0.2
USP38-202ENST00000510377 UNC13DQ70J99 1090 aa16.31■□□□□ 0.2
USP38-202ENST00000510377 SH3RF1Q7Z6J0 888 aa16.31■□□□□ 0.2
USP38-202ENST00000510377 ANKRD42Q8N9B4 389 aa16.31■□□□□ 0.2
USP38-202ENST00000510377 MTRF1LQ9UGC7 380 aaKnown RBP16.31■□□□□ 0.2
USP38-202ENST00000510377 SRP68Q9UHB9 627 aaKnown RBP16.31■□□□□ 0.2
USP38-202ENST00000510377 REXO2Q9Y3B8 237 aaKnown RBP16.31■□□□□ 0.2
USP38-202ENST00000510377 LOC102724159A0A0B4J2E5 919 aa16.31■□□□□ 0.2
USP38-202ENST00000510377 MYO1FO00160 1098 aa16.31■□□□□ 0.2
USP38-202ENST00000510377 PLCG2P16885 1265 aa16.31■□□□□ 0.2
USP38-202ENST00000510377 FGFR2P21802 821 aa16.31■□□□□ 0.2
USP38-202ENST00000510377 BAG6P46379 1132 aa16.31■□□□□ 0.2
USP38-202ENST00000510377 TCP10Q12799 353 aa16.31■□□□□ 0.2
USP38-202ENST00000510377 PWP2Q15269 919 aaKnown RBP16.31■□□□□ 0.2
USP38-202ENST00000510377 NSUN4Q96CB9 384 aaKnown RBP16.31■□□□□ 0.2
USP38-202ENST00000510377 TACO1Q9BSH4 297 aaKnown RBP16.31■□□□□ 0.2
USP38-202ENST00000510377 USP17L5A8MUK1 530 aa16.3■□□□□ 0.2
USP38-202ENST00000510377 E9PMD0 336 aa16.3■□□□□ 0.2
USP38-202ENST00000510377 SPOPO43791 374 aa16.3■□□□□ 0.2
USP38-202ENST00000510377 PLTPP55058 493 aa16.3■□□□□ 0.2
USP38-202ENST00000510377 GRIPAP1Q4V328 841 aa16.3■□□□□ 0.2
USP38-202ENST00000510377 PAPD7Q5XG87 772 aaKnown RBP16.3■□□□□ 0.2
USP38-202ENST00000510377 KCTD1Q719H9 257 aa16.3■□□□□ 0.2
USP38-202ENST00000510377 MYCT1Q8N699 235 aa16.3■□□□□ 0.2
USP38-202ENST00000510377 BARHL2Q9NY43 387 aa16.3■□□□□ 0.2
USP38-202ENST00000510377 FAM53CQ9NYF3 392 aa16.3■□□□□ 0.2
USP38-202ENST00000510377 NWD1Q149M9 1564 aa16.3■□□□□ 0.2
USP38-202ENST00000510377 TULP2O00295 520 aa16.3■□□□□ 0.2
USP38-202ENST00000510377 GFPT2O94808 682 aa16.3■□□□□ 0.2
USP38-202ENST00000510377 STAT1P42224 750 aa16.3■□□□□ 0.2
USP38-202ENST00000510377 VPS41P49754 854 aa16.3■□□□□ 0.2
USP38-202ENST00000510377 ALKBH5Q6P6C2 394 aaKnown RBP16.3■□□□□ 0.2
USP38-202ENST00000510377 CCSER1Q9C0I3 900 aa16.3■□□□□ 0.2
USP38-202ENST00000510377 NSRP1Q9H0G5 558 aaKnown RBP16.3■□□□□ 0.2
USP38-202ENST00000510377 MYMKA6NI61 221 aa16.3■□□□□ 0.2
USP38-202ENST00000510377 PGRMC1O00264 195 aaKnown RBP16.3■□□□□ 0.2
USP38-202ENST00000510377 RGS16O15492 202 aaPredicted RBP16.3■□□□□ 0.2
USP38-202ENST00000510377 CTNND1O60716 968 aaKnown RBP16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms