RNA–Protein interactions for RNA: ENST00000510105.5

SMARCAD1-207, Transcript of SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1, humanhuman

TSL 5

Gene SMARCAD1, Length 2,409 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAD1-207ENST00000510105 APBA1Q02410 837 aa17.3■□□□□ 0.36
SMARCAD1-207ENST00000510105 MUM1L1Q5H9M0 696 aa17.3■□□□□ 0.36
SMARCAD1-207ENST00000510105 PPP4R3AQ6IN85 833 aa17.3■□□□□ 0.36
SMARCAD1-207ENST00000510105 PDXDC1Q6P996 788 aa17.3■□□□□ 0.36
SMARCAD1-207ENST00000510105 MYOCDQ8IZQ8 938 aa17.3■□□□□ 0.36
SMARCAD1-207ENST00000510105 HDAC7Q8WUI4 952 aa17.3■□□□□ 0.36
SMARCAD1-207ENST00000510105 IQCDQ96DY2 449 aa17.3■□□□□ 0.36
SMARCAD1-207ENST00000510105 ADAMTSL1Q8N6G6 1762 aa17.3■□□□□ 0.36
SMARCAD1-207ENST00000510105 ARFGEF1Q9Y6D6 1849 aa17.3■□□□□ 0.36
SMARCAD1-207ENST00000510105 ABCB11O95342 1321 aa17.29■□□□□ 0.36
SMARCAD1-207ENST00000510105 MARCH6O60337 910 aa17.29■□□□□ 0.36
SMARCAD1-207ENST00000510105 CAPN2P17655 700 aa17.29■□□□□ 0.36
SMARCAD1-207ENST00000510105 SHMT1P34896 483 aa17.29■□□□□ 0.36
SMARCAD1-207ENST00000510105 CCNI2Q6ZMN8 369 aaPredicted RBP17.29■□□□□ 0.36
SMARCAD1-207ENST00000510105 CCDC84Q86UT8 332 aaPredicted RBP17.29■□□□□ 0.36
SMARCAD1-207ENST00000510105 FNBP4Q8N3X1 1017 aaPredicted RBP17.29■□□□□ 0.36
SMARCAD1-207ENST00000510105 TSG101Q99816 390 aa17.29■□□□□ 0.36
SMARCAD1-207ENST00000510105 PANK4Q9NVE7 773 aa17.29■□□□□ 0.36
SMARCAD1-207ENST00000510105 SERPINB13Q9UIV8 391 aa17.29■□□□□ 0.36
SMARCAD1-207ENST00000510105 THSD7AQ9UPZ6 1657 aa17.29■□□□□ 0.36
SMARCAD1-207ENST00000510105 TRAF5O00463 557 aa17.29■□□□□ 0.36
SMARCAD1-207ENST00000510105 MPHOSPH10O00566 681 aaKnown RBP17.29■□□□□ 0.36
SMARCAD1-207ENST00000510105 RNF40O75150 1001 aa17.29■□□□□ 0.36
SMARCAD1-207ENST00000510105 ACTN2P35609 894 aa17.29■□□□□ 0.36
SMARCAD1-207ENST00000510105 MAGEA1P43355 309 aa17.29■□□□□ 0.36
SMARCAD1-207ENST00000510105 RAD51AP2Q09MP3 1159 aa17.29■□□□□ 0.36
SMARCAD1-207ENST00000510105 MAP9Q49MG5 647 aa17.29■□□□□ 0.36
SMARCAD1-207ENST00000510105 ZCWPW2Q504Y3 356 aa17.29■□□□□ 0.36
SMARCAD1-207ENST00000510105 CACNA2D4Q7Z3S7 1137 aa17.29■□□□□ 0.36
SMARCAD1-207ENST00000510105 TMC4Q7Z404 712 aa17.29■□□□□ 0.36
SMARCAD1-207ENST00000510105 NELFCDQ8IXH7 590 aa17.29■□□□□ 0.36
SMARCAD1-207ENST00000510105 CUL5Q93034 780 aa17.29■□□□□ 0.36
SMARCAD1-207ENST00000510105 FAM204AQ9H8W3 233 aa17.29■□□□□ 0.36
SMARCAD1-207ENST00000510105 MYH4Q9Y623 1939 aa17.28■□□□□ 0.36
SMARCAD1-207ENST00000510105 USP17L15C9J2P7 530 aa17.28■□□□□ 0.36
SMARCAD1-207ENST00000510105 USP17L13C9JLJ4 530 aa17.28■□□□□ 0.36
SMARCAD1-207ENST00000510105 USP17L11C9JVI0 530 aa17.28■□□□□ 0.36
SMARCAD1-207ENST00000510105 USP17L18D6R9N7 530 aa17.28■□□□□ 0.36
SMARCAD1-207ENST00000510105 USP17L22D6RA61 530 aa17.28■□□□□ 0.36
SMARCAD1-207ENST00000510105 USP17L17D6RBQ6 530 aa17.28■□□□□ 0.36
SMARCAD1-207ENST00000510105 USP17L19D6RCP7 530 aa17.28■□□□□ 0.36
SMARCAD1-207ENST00000510105 USP17L20D6RJB6 530 aa17.28■□□□□ 0.36
SMARCAD1-207ENST00000510105 MCM3P25205 808 aa17.28■□□□□ 0.36
SMARCAD1-207ENST00000510105 MATR3P43243 847 aaKnown RBP eCLIP17.28■□□□□ 0.361e-7■■■■■ 30.7
SMARCAD1-207ENST00000510105 RASSF7Q02833 373 aa17.28■□□□□ 0.36
SMARCAD1-207ENST00000510105 DDR1Q08345 913 aa17.28■□□□□ 0.36
SMARCAD1-207ENST00000510105 USP17L24Q0WX57 530 aa17.28■□□□□ 0.36
SMARCAD1-207ENST00000510105 PSMD2Q13200 908 aa17.28■□□□□ 0.36
SMARCAD1-207ENST00000510105 ASTE1Q2TB18 679 aaPredicted RBP17.28■□□□□ 0.36
SMARCAD1-207ENST00000510105 FAM26FQ5R3K3 315 aa17.28■□□□□ 0.36
SMARCAD1-207ENST00000510105 HGSNATQ68CP4 663 aa17.28■□□□□ 0.36
SMARCAD1-207ENST00000510105 USP17L6PQ6QN14 398 aa17.28■□□□□ 0.36
SMARCAD1-207ENST00000510105 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.28■□□□□ 0.36
SMARCAD1-207ENST00000510105 GOLGA5Q8TBA6 731 aa17.28■□□□□ 0.36
SMARCAD1-207ENST00000510105 OSBPL9Q96SU4 736 aa17.28■□□□□ 0.36
SMARCAD1-207ENST00000510105 LRRC1Q9BTT6 524 aa17.28■□□□□ 0.36
SMARCAD1-207ENST00000510105 SELENOOQ9BVL4 669 aa17.28■□□□□ 0.36
SMARCAD1-207ENST00000510105 ACBD3Q9H3P7 528 aa17.28■□□□□ 0.36
SMARCAD1-207ENST00000510105 VIPAS39Q9H9C1 493 aa17.28■□□□□ 0.36
SMARCAD1-207ENST00000510105 USP40Q9NVE5 1235 aa17.28■□□□□ 0.36
SMARCAD1-207ENST00000510105 PCDHA12Q9UN75 941 aa17.28■□□□□ 0.36
SMARCAD1-207ENST00000510105 BUB1O43683 1085 aa17.28■□□□□ 0.36
SMARCAD1-207ENST00000510105 SLC1A4P43007 532 aa17.28■□□□□ 0.36
SMARCAD1-207ENST00000510105 SHROOM1Q2M3G4 852 aaPredicted RBP17.28■□□□□ 0.36
SMARCAD1-207ENST00000510105 CCDC40Q4G0X9 1142 aa17.28■□□□□ 0.36
SMARCAD1-207ENST00000510105 MTMR8Q96EF0 704 aa17.28■□□□□ 0.36
SMARCAD1-207ENST00000510105 PSTPIP2Q9H939 334 aa17.28■□□□□ 0.36
SMARCAD1-207ENST00000510105 MED4Q9NPJ6 270 aa17.28■□□□□ 0.36
SMARCAD1-207ENST00000510105 DMGDHQ9UI17 866 aaKnown RBP17.28■□□□□ 0.36
SMARCAD1-207ENST00000510105 COL4A3BPQ9Y5P4 624 aa17.28■□□□□ 0.36
SMARCAD1-207ENST00000510105 UBR3Q6ZT12 1888 aa17.27■□□□□ 0.36
SMARCAD1-207ENST00000510105 POTEB3A0JP26 581 aa17.27■□□□□ 0.36
SMARCAD1-207ENST00000510105 POTECB2RU33 542 aa17.27■□□□□ 0.36
SMARCAD1-207ENST00000510105 RAD21O60216 631 aa17.27■□□□□ 0.36
SMARCAD1-207ENST00000510105 NOL4O94818 638 aa17.27■□□□□ 0.36
SMARCAD1-207ENST00000510105 AARSP49588 968 aaKnown RBP eCLIP17.27■□□□□ 0.36
SMARCAD1-207ENST00000510105 TDRD12Q587J7 1177 aaKnown RBP17.27■□□□□ 0.36
SMARCAD1-207ENST00000510105 PPP1R18Q6NYC8 613 aa17.27■□□□□ 0.36
SMARCAD1-207ENST00000510105 POTEBQ6S5H4 581 aa17.27■□□□□ 0.36
SMARCAD1-207ENST00000510105 CRACR2AQ9BSW2 395 aa17.27■□□□□ 0.36
SMARCAD1-207ENST00000510105 KIAA1024Q9UPX6 916 aa17.27■□□□□ 0.36
SMARCAD1-207ENST00000510105 ZBTB5O15062 677 aa17.27■□□□□ 0.35
SMARCAD1-207ENST00000510105 TLR2O60603 784 aa17.27■□□□□ 0.35
SMARCAD1-207ENST00000510105 PRPF6O94906 941 aaKnown RBP17.27■□□□□ 0.35
SMARCAD1-207ENST00000510105 IRX5P78411 483 aaPredicted RBP17.27■□□□□ 0.35
SMARCAD1-207ENST00000510105 FKBP3Q00688 224 aaKnown RBP17.27■□□□□ 0.35
SMARCAD1-207ENST00000510105 SLC7A5Q01650 507 aa17.27■□□□□ 0.35
SMARCAD1-207ENST00000510105 LRRC27Q9C0I9 530 aa17.27■□□□□ 0.35
SMARCAD1-207ENST00000510105 LTBP1Q14766 1721 aa17.27■□□□□ 0.35
SMARCAD1-207ENST00000510105 HOXA10P31260 410 aaPredicted RBP17.26■□□□□ 0.35
SMARCAD1-207ENST00000510105 GGCXP38435 758 aa17.26■□□□□ 0.35
SMARCAD1-207ENST00000510105 STAT3P40763 770 aa17.26■□□□□ 0.35
SMARCAD1-207ENST00000510105 MRPL12P52815 198 aaKnown RBP17.26■□□□□ 0.35
SMARCAD1-207ENST00000510105 DOK7Q18PE1 504 aa17.26■□□□□ 0.35
SMARCAD1-207ENST00000510105 FOXR1Q6PIV2 292 aa17.26■□□□□ 0.35
SMARCAD1-207ENST00000510105 ZFPM1Q8IX07 1006 aa17.26■□□□□ 0.35
SMARCAD1-207ENST00000510105 MMGT1Q8N4V1 131 aa17.26■□□□□ 0.35
SMARCAD1-207ENST00000510105 SPATA4Q8NEY3 305 aa17.26■□□□□ 0.35
SMARCAD1-207ENST00000510105 LSM14BQ9BX40 385 aaKnown RBP17.26■□□□□ 0.35
SMARCAD1-207ENST00000510105 FAM196BA6NMK8 535 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms