RNA–Protein interactions for RNA: ENST00000509828.1

MBD4-208, Transcript of methyl-CpG binding domain 4, DNA glycosylase, humanhuman

TSL 2

Gene MBD4, Length 576 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4-208ENST00000509828 CLDND1Q9NY35 253 aa12.08□□□□□ -0.48
MBD4-208ENST00000509828 C17orf102A2RUQ5 167 aa12.07□□□□□ -0.48
MBD4-208ENST00000509828 TRIM6-TRIM34B2RNG4 842 aa12.07□□□□□ -0.48
MBD4-208ENST00000509828 PPFIA4O75335 1185 aa12.07□□□□□ -0.48
MBD4-208ENST00000509828 MFAP1P55081 439 aaKnown RBP12.07□□□□□ -0.48
MBD4-208ENST00000509828 TCEAL5Q5H9L2 206 aa12.07□□□□□ -0.48
MBD4-208ENST00000509828 KCNV1Q6PIU1 500 aa12.07□□□□□ -0.48
MBD4-208ENST00000509828 TMEM192Q8IY95 271 aa12.07□□□□□ -0.48
MBD4-208ENST00000509828 ADGRF4Q8IZF3 695 aa12.07□□□□□ -0.48
MBD4-208ENST00000509828 PNMA1Q8ND90 353 aa12.07□□□□□ -0.48
MBD4-208ENST00000509828 ATP6V0A1Q93050 837 aa12.07□□□□□ -0.48
MBD4-208ENST00000509828 FAM227BQ96M60 508 aa12.07□□□□□ -0.48
MBD4-208ENST00000509828 SCN10AQ9Y5Y9 1956 aa12.07□□□□□ -0.48
MBD4-208ENST00000509828 H3BNC9 293 aa12.06□□□□□ -0.48
MBD4-208ENST00000509828 ZNF213O14771 459 aa12.06□□□□□ -0.48
MBD4-208ENST00000509828 NCK2O43639 380 aa12.06□□□□□ -0.48
MBD4-208ENST00000509828 GGPS1O95749 300 aa12.06□□□□□ -0.48
MBD4-208ENST00000509828 F2P00734 622 aa12.06□□□□□ -0.48
MBD4-208ENST00000509828 PARP1P09874 1014 aaKnown RBP12.06□□□□□ -0.48
MBD4-208ENST00000509828 SNHG28P0DPA3 235 aa12.06□□□□□ -0.48
MBD4-208ENST00000509828 QRICH1Q2TAL8 776 aa12.06□□□□□ -0.48
MBD4-208ENST00000509828 DGKHQ86XP1 1220 aa12.06□□□□□ -0.48
MBD4-208ENST00000509828 RILPL2Q969X0 211 aa12.06□□□□□ -0.48
MBD4-208ENST00000509828 EMID1Q96A84 441 aaPredicted RBP12.06□□□□□ -0.48
MBD4-208ENST00000509828 PABPC5Q96DU9 382 aaKnown RBP12.06□□□□□ -0.48
MBD4-208ENST00000509828 MFSD14AQ96MC6 490 aa12.06□□□□□ -0.48
MBD4-208ENST00000509828 IFIH1Q9BYX4 1025 aaKnown RBP12.06□□□□□ -0.48
MBD4-208ENST00000509828 NSUN3Q9H649 340 aaKnown RBP12.06□□□□□ -0.48
MBD4-208ENST00000509828 PXMP2Q9NR77 195 aa12.06□□□□□ -0.48
MBD4-208ENST00000509828 COL20A1Q9P218 1284 aa12.06□□□□□ -0.48
MBD4-208ENST00000509828 PRKAG3Q9UGI9 489 aa12.06□□□□□ -0.48
MBD4-208ENST00000509828 HAS3O00219 553 aa12.05□□□□□ -0.48
MBD4-208ENST00000509828 NOP56O00567 594 aaKnown RBP12.05□□□□□ -0.48
MBD4-208ENST00000509828 CTSHP09668 335 aa12.05□□□□□ -0.48
MBD4-208ENST00000509828 GNAT1P11488 350 aa12.05□□□□□ -0.48
MBD4-208ENST00000509828 CTNNB1P35222 781 aa12.05□□□□□ -0.48
MBD4-208ENST00000509828 HTRA4P83105 476 aaPredicted RBP12.05□□□□□ -0.48
MBD4-208ENST00000509828 NMIQ13287 307 aaPredicted RBP12.05□□□□□ -0.48
MBD4-208ENST00000509828 MBTPS1Q14703 1052 aa12.05□□□□□ -0.48
MBD4-208ENST00000509828 CLUL1Q15846 466 aa12.05□□□□□ -0.48
MBD4-208ENST00000509828 TRIM71Q2Q1W2 868 aaKnown RBP12.05□□□□□ -0.48
MBD4-208ENST00000509828 ASPRV1Q53RT3 343 aa12.05□□□□□ -0.48
MBD4-208ENST00000509828 CELF3Q5SZQ8 465 aaKnown RBP12.05□□□□□ -0.48
MBD4-208ENST00000509828 SERINC5Q86VE9 423 aa12.05□□□□□ -0.48
MBD4-208ENST00000509828 FIBCD1Q8N539 461 aa12.05□□□□□ -0.48
MBD4-208ENST00000509828 NEK9Q8TD19 979 aa12.05□□□□□ -0.48
MBD4-208ENST00000509828 WNT8BQ93098 351 aa12.05□□□□□ -0.48
MBD4-208ENST00000509828 IL17RAQ96F46 866 aa12.05□□□□□ -0.48
MBD4-208ENST00000509828 FBXL18Q96ME1 805 aa12.05□□□□□ -0.48
MBD4-208ENST00000509828 AMNQ9BXJ7 453 aa12.05□□□□□ -0.48
MBD4-208ENST00000509828 TANC1Q9C0D5 1861 aa12.04□□□□□ -0.48
MBD4-208ENST00000509828 A0A0D9SFI3 127 aa12.04□□□□□ -0.48
MBD4-208ENST00000509828 H3BRB1 525 aa12.04□□□□□ -0.48
MBD4-208ENST00000509828 KDM4AO75164 1064 aa12.04□□□□□ -0.48
MBD4-208ENST00000509828 CSPG5O95196 566 aa12.04□□□□□ -0.48
MBD4-208ENST00000509828 NHLH1Q02575 133 aa12.04□□□□□ -0.48
MBD4-208ENST00000509828 PLEKHG4Q58EX7 1191 aa12.04□□□□□ -0.48
MBD4-208ENST00000509828 MYSM1Q5VVJ2 828 aa12.04□□□□□ -0.48
MBD4-208ENST00000509828 DIEXFQ68CQ4 756 aaKnown RBP12.04□□□□□ -0.48
MBD4-208ENST00000509828 TBC1D10CQ8IV04 446 aa12.04□□□□□ -0.48
MBD4-208ENST00000509828 ADHFE1Q8IWW8 467 aa12.04□□□□□ -0.48
MBD4-208ENST00000509828 TOP1MTQ969P6 601 aa12.04□□□□□ -0.48
MBD4-208ENST00000509828 POP1Q99575 1024 aaKnown RBP12.04□□□□□ -0.48
MBD4-208ENST00000509828 KCNH6Q9H252 994 aa12.04□□□□□ -0.48
MBD4-208ENST00000509828 IGFLR1Q9H665 355 aa12.04□□□□□ -0.48
MBD4-208ENST00000509828 TUT1Q9H6E5 874 aaKnown RBP12.04□□□□□ -0.48
MBD4-208ENST00000509828 CCDC171Q6TFL3 1326 aa12.04□□□□□ -0.48
MBD4-208ENST00000509828 LCTP09848 1927 aa12.03□□□□□ -0.48
MBD4-208ENST00000509828 COL4A4P53420 1690 aaPredicted RBP12.03□□□□□ -0.48
MBD4-208ENST00000509828 REV3LO60673 3130 aa12.03□□□□□ -0.48
MBD4-208ENST00000509828 SMIM10L2AP0DMW4 78 aa12.03□□□□□ -0.48
MBD4-208ENST00000509828 SMIM10L2BP0DMW5 78 aa12.03□□□□□ -0.48
MBD4-208ENST00000509828 CCND2P30279 289 aa12.03□□□□□ -0.48
MBD4-208ENST00000509828 ZP2Q05996 745 aa12.03□□□□□ -0.48
MBD4-208ENST00000509828 TRAF1Q13077 416 aa12.03□□□□□ -0.48
MBD4-208ENST00000509828 HSDL1Q3SXM5 330 aa12.03□□□□□ -0.48
MBD4-208ENST00000509828 TRAF7Q6Q0C0 670 aa12.03□□□□□ -0.48
MBD4-208ENST00000509828 RPAINQ86UA6 219 aa12.03□□□□□ -0.48
MBD4-208ENST00000509828 FCHSD1Q86WN1 690 aa12.03□□□□□ -0.48
MBD4-208ENST00000509828 TET1Q8NFU7 2136 aa12.03□□□□□ -0.48
MBD4-208ENST00000509828 SP7Q8TDD2 431 aaPredicted RBP12.03□□□□□ -0.48
MBD4-208ENST00000509828 APBB2Q92870 758 aa12.03□□□□□ -0.48
MBD4-208ENST00000509828 ZSCAN10Q96SZ4 725 aaPredicted RBP12.03□□□□□ -0.48
MBD4-208ENST00000509828 UBAC1Q9BSL1 405 aa12.03□□□□□ -0.48
MBD4-208ENST00000509828 C11orf84Q9BUA3 381 aaPredicted RBP12.03□□□□□ -0.48
MBD4-208ENST00000509828 JMJD4Q9H9V9 463 aa12.03□□□□□ -0.48
MBD4-208ENST00000509828 PCDHB15Q9Y5E8 787 aa12.03□□□□□ -0.48
MBD4-208ENST00000509828 PCDHA1Q9Y5I3 950 aa12.03□□□□□ -0.48
MBD4-208ENST00000509828 TRIP12Q14669 1992 aaPredicted RBP12.03□□□□□ -0.48
MBD4-208ENST00000509828 MUC6Q6W4X9 2439 aa12.02□□□□□ -0.48
MBD4-208ENST00000509828 XIRP2A4UGR9 3374 aa12.02□□□□□ -0.49
MBD4-208ENST00000509828 POTEB3A0JP26 581 aa12.02□□□□□ -0.49
MBD4-208ENST00000509828 TREHO43280 583 aa12.02□□□□□ -0.49
MBD4-208ENST00000509828 TGFB3P10600 412 aa12.02□□□□□ -0.49
MBD4-208ENST00000509828 HOXA13P31271 388 aaPredicted RBP12.02□□□□□ -0.49
MBD4-208ENST00000509828 PDE1AP54750 535 aa12.02□□□□□ -0.49
MBD4-208ENST00000509828 GNPTABQ3T906 1256 aa12.02□□□□□ -0.49
MBD4-208ENST00000509828 UTP14CQ5TAP6 766 aaKnown RBP12.02□□□□□ -0.49
MBD4-208ENST00000509828 POTEBQ6S5H4 581 aa12.02□□□□□ -0.49
MBD4-208ENST00000509828 ZNF589Q86UQ0 364 aaPredicted RBP12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms