RNA–Protein interactions for RNA: ENST00000509092.5

PDGFRA-207, Transcript of platelet derived growth factor receptor alpha, humanhuman

TSL 1 (best)

Gene PDGFRA, Length 2,417 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-207ENST00000509092 FAM114A1Q8IWE2 563 aa10.98□□□□□ -0.65
PDGFRA-207ENST00000509092 KIF2BQ8N4N8 673 aa10.98□□□□□ -0.65
PDGFRA-207ENST00000509092 LINS1Q8NG48 757 aa10.98□□□□□ -0.65
PDGFRA-207ENST00000509092 MDM1Q8TC05 714 aa10.98□□□□□ -0.65
PDGFRA-207ENST00000509092 NELFBQ8WX92 580 aa10.98□□□□□ -0.65
PDGFRA-207ENST00000509092 LZICQ8WZA0 190 aa10.98□□□□□ -0.65
PDGFRA-207ENST00000509092 TRIM7Q9C029 511 aa10.98□□□□□ -0.65
PDGFRA-207ENST00000509092 PHACTR1Q9C0D0 580 aa10.98□□□□□ -0.65
PDGFRA-207ENST00000509092 CSRNP2Q9H175 543 aa10.98□□□□□ -0.65
PDGFRA-207ENST00000509092 BIN2Q9UBW5 565 aaPredicted RBP10.98□□□□□ -0.65
PDGFRA-207ENST00000509092 SCOCQ9UIL1 159 aa10.98□□□□□ -0.65
PDGFRA-207ENST00000509092 FPGT-TNNI3KV9GXZ4 949 aa10.98□□□□□ -0.65
PDGFRA-207ENST00000509092 SART1O43290 800 aaKnown RBP10.97□□□□□ -0.65
PDGFRA-207ENST00000509092 RAD51CO43502 376 aa10.97□□□□□ -0.65
PDGFRA-207ENST00000509092 OAS1P00973 400 aaKnown RBP10.97□□□□□ -0.65
PDGFRA-207ENST00000509092 CASP1P29466 404 aa10.97□□□□□ -0.65
PDGFRA-207ENST00000509092 RAD23BP54727 409 aa10.97□□□□□ -0.65
PDGFRA-207ENST00000509092 NLRP5P59047 1200 aa10.97□□□□□ -0.65
PDGFRA-207ENST00000509092 TNNC1P63316 161 aa10.97□□□□□ -0.65
PDGFRA-207ENST00000509092 SAFBQ15424 915 aaKnown RBP eCLIP10.97□□□□□ -0.65
PDGFRA-207ENST00000509092 KRT71Q3SY84 523 aa10.97□□□□□ -0.65
PDGFRA-207ENST00000509092 RILPL1Q5EBL4 403 aa10.97□□□□□ -0.65
PDGFRA-207ENST00000509092 TSHZ1Q6ZSZ6 1077 aa10.97□□□□□ -0.65
PDGFRA-207ENST00000509092 USP49Q70CQ1 688 aa10.97□□□□□ -0.65
PDGFRA-207ENST00000509092 ARMCX6Q7L4S7 300 aa10.97□□□□□ -0.65
PDGFRA-207ENST00000509092 PROSER2Q86WR7 435 aaPredicted RBP10.97□□□□□ -0.65
PDGFRA-207ENST00000509092 DYDC1Q8WWB3 177 aa10.97□□□□□ -0.65
PDGFRA-207ENST00000509092 IQCDQ96DY2 449 aa10.97□□□□□ -0.65
PDGFRA-207ENST00000509092 CCDC42Q96M95 316 aa10.97□□□□□ -0.65
PDGFRA-207ENST00000509092 RAB3IPQ96QF0 476 aaPredicted RBP10.97□□□□□ -0.65
PDGFRA-207ENST00000509092 AGPAT5Q9NUQ2 364 aa10.97□□□□□ -0.65
PDGFRA-207ENST00000509092 NKX1-2Q9UD57 310 aaPredicted RBP10.97□□□□□ -0.65
PDGFRA-207ENST00000509092 SLC4A7Q9Y6M7 1214 aa10.97□□□□□ -0.65
PDGFRA-207ENST00000509092 H7C1D1 291 aa10.97□□□□□ -0.65
PDGFRA-207ENST00000509092 GRM8O00222 908 aa10.97□□□□□ -0.65
PDGFRA-207ENST00000509092 CHN1P15882 459 aa10.97□□□□□ -0.65
PDGFRA-207ENST00000509092 RPL13P26373 211 aaKnown RBP10.97□□□□□ -0.65
PDGFRA-207ENST00000509092 DNM2P50570 870 aa10.97□□□□□ -0.65
PDGFRA-207ENST00000509092 ANTXR2P58335 489 aa10.97□□□□□ -0.65
PDGFRA-207ENST00000509092 PABPC4Q13310 644 aaKnown RBP eCLIP10.97□□□□□ -0.65
PDGFRA-207ENST00000509092 IL17REQ8NFR9 667 aa10.97□□□□□ -0.65
PDGFRA-207ENST00000509092 UBLCP1Q8WVY7 318 aaPredicted RBP10.97□□□□□ -0.65
PDGFRA-207ENST00000509092 AZIN2Q96A70 460 aa10.97□□□□□ -0.65
PDGFRA-207ENST00000509092 TSPAN18Q96SJ8 248 aa10.97□□□□□ -0.65
PDGFRA-207ENST00000509092 STRN4Q9NRL3 753 aa10.97□□□□□ -0.65
PDGFRA-207ENST00000509092 ATP8A2Q9NTI2 1148 aa10.97□□□□□ -0.65
PDGFRA-207ENST00000509092 FBXL5Q9UKA1 691 aa10.97□□□□□ -0.65
PDGFRA-207ENST00000509092 MAST3O60307 1309 aa10.96□□□□□ -0.65
PDGFRA-207ENST00000509092 ZNF335Q9H4Z2 1342 aaPredicted RBP10.96□□□□□ -0.65
PDGFRA-207ENST00000509092 A0A087X0B3 334 aa10.96□□□□□ -0.65
PDGFRA-207ENST00000509092 SMAPO00193 183 aa10.96□□□□□ -0.65
PDGFRA-207ENST00000509092 EEF1GP26641 437 aaKnown RBP10.96□□□□□ -0.65
PDGFRA-207ENST00000509092 METAP2P50579 478 aaKnown RBP eCLIP10.96□□□□□ -0.65
PDGFRA-207ENST00000509092 ERVK-9P63128 1117 aa10.96□□□□□ -0.65
PDGFRA-207ENST00000509092 KLHDC7AQ5VTJ3 777 aa10.96□□□□□ -0.65
PDGFRA-207ENST00000509092 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP10.96□□□□□ -0.65
PDGFRA-207ENST00000509092 STK32AQ8WU08 396 aa10.96□□□□□ -0.65
PDGFRA-207ENST00000509092 DNAJC9Q8WXX5 260 aa10.96□□□□□ -0.65
PDGFRA-207ENST00000509092 FAM136AQ96C01 138 aa10.96□□□□□ -0.65
PDGFRA-207ENST00000509092 IWS1Q96ST2 819 aa10.96□□□□□ -0.65
PDGFRA-207ENST00000509092 CTTNBP2NLQ9P2B4 639 aa10.96□□□□□ -0.65
PDGFRA-207ENST00000509092 MAP3K2Q9Y2U5 619 aa10.96□□□□□ -0.65
PDGFRA-207ENST00000509092 THRAP3Q9Y2W1 955 aaKnown RBP10.96□□□□□ -0.65
PDGFRA-207ENST00000509092 SPEF2Q9C093 1822 aa10.96□□□□□ -0.66
PDGFRA-207ENST00000509092 SNX3O60493 162 aa10.96□□□□□ -0.66
PDGFRA-207ENST00000509092 LCA5LO95447 670 aa10.96□□□□□ -0.66
PDGFRA-207ENST00000509092 SRGNP10124 158 aa10.96□□□□□ -0.66
PDGFRA-207ENST00000509092 TRIM21P19474 475 aaKnown RBP10.96□□□□□ -0.66
PDGFRA-207ENST00000509092 GSTT1P30711 240 aa10.96□□□□□ -0.66
PDGFRA-207ENST00000509092 SKIV2L2P42285 1042 aaKnown RBP10.96□□□□□ -0.66
PDGFRA-207ENST00000509092 CTDSPL2Q05D32 466 aa10.96□□□□□ -0.66
PDGFRA-207ENST00000509092 MPP3Q13368 585 aa10.96□□□□□ -0.66
PDGFRA-207ENST00000509092 KRT26Q7Z3Y9 468 aa10.96□□□□□ -0.66
PDGFRA-207ENST00000509092 IRF2BP1Q8IU81 584 aa10.96□□□□□ -0.66
PDGFRA-207ENST00000509092 ARHGAP18Q8N392 663 aa10.96□□□□□ -0.66
PDGFRA-207ENST00000509092 RNF10Q8N5U6 811 aaKnown RBP10.96□□□□□ -0.66
PDGFRA-207ENST00000509092 PHC3Q8NDX5 983 aa10.96□□□□□ -0.66
PDGFRA-207ENST00000509092 NCSTNQ92542 709 aa10.96□□□□□ -0.66
PDGFRA-207ENST00000509092 PTPRN2Q92932 1015 aa10.96□□□□□ -0.66
PDGFRA-207ENST00000509092 TIPINQ9BVW5 301 aa10.96□□□□□ -0.66
PDGFRA-207ENST00000509092 CYP39A1Q9NYL5 469 aa10.96□□□□□ -0.66
PDGFRA-207ENST00000509092 VPS54Q9P1Q0 977 aa10.96□□□□□ -0.66
PDGFRA-207ENST00000509092 ZMYND8Q9ULU4 1186 aaPredicted RBP10.96□□□□□ -0.66
PDGFRA-207ENST00000509092 IGSF1Q8N6C5 1336 aa10.95□□□□□ -0.66
PDGFRA-207ENST00000509092 BHMG1C9JSJ3 638 aaPredicted RBP10.95□□□□□ -0.66
PDGFRA-207ENST00000509092 PJA2O43164 708 aa10.95□□□□□ -0.66
PDGFRA-207ENST00000509092 TPBGLP0DKB5 382 aa10.95□□□□□ -0.66
PDGFRA-207ENST00000509092 EIF4BP23588 611 aaKnown RBP10.95□□□□□ -0.66
PDGFRA-207ENST00000509092 EIF3BP55884 814 aaKnown RBP10.95□□□□□ -0.66
PDGFRA-207ENST00000509092 ZC3H6P61129 1189 aaKnown RBP10.95□□□□□ -0.66
PDGFRA-207ENST00000509092 CWF19L2Q2TBE0 894 aaKnown RBP10.95□□□□□ -0.66
PDGFRA-207ENST00000509092 NCOA7Q8NI08 942 aa10.95□□□□□ -0.66
PDGFRA-207ENST00000509092 ASAP3Q8TDY4 903 aa10.95□□□□□ -0.66
PDGFRA-207ENST00000509092 PHKBQ93100 1093 aa10.95□□□□□ -0.66
PDGFRA-207ENST00000509092 LTV1Q96GA3 475 aaPredicted RBP10.95□□□□□ -0.66
PDGFRA-207ENST00000509092 RANBP17Q9H2T7 1088 aaKnown RBP10.95□□□□□ -0.66
PDGFRA-207ENST00000509092 USP15Q9Y4E8 981 aaPredicted RBP10.95□□□□□ -0.66
PDGFRA-207ENST00000509092 PIK3C2AO00443 1686 aa10.95□□□□□ -0.66
PDGFRA-207ENST00000509092 RGPD8O14715 1765 aaPredicted RBP10.95□□□□□ -0.66
PDGFRA-207ENST00000509092 STK36Q9NRP7 1315 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms