RNA–Protein interactions for RNA: ENST00000508597.1

HMGB1P44-201, Transcript of high mobility group box 1 pseudogene 44, humanhuman

BASIC

Gene HMGB1P44, Length 572 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P44-201ENST00000508597 DBNLQ9UJU6 430 aaKnown RBP6.65□□□□□ -1.34
HMGB1P44-201ENST00000508597 TTF2Q9UNY4 1162 aaKnown RBP6.65□□□□□ -1.34
HMGB1P44-201ENST00000508597 RAXQ9Y2V3 346 aa6.65□□□□□ -1.34
HMGB1P44-201ENST00000508597 AOX1Q06278 1338 aa6.65□□□□□ -1.35
HMGB1P44-201ENST00000508597 KDM2BQ8NHM5 1336 aa6.65□□□□□ -1.35
HMGB1P44-201ENST00000508597 SALL1Q9NSC2 1324 aa6.65□□□□□ -1.35
HMGB1P44-201ENST00000508597 RBAK-RBAKDNI3L0D1 243 aa6.64□□□□□ -1.35
HMGB1P44-201ENST00000508597 SNAP23O00161 211 aa6.64□□□□□ -1.35
HMGB1P44-201ENST00000508597 TMPRSS2O15393 492 aa6.64□□□□□ -1.35
HMGB1P44-201ENST00000508597 GLRX3O76003 335 aaKnown RBP6.64□□□□□ -1.35
HMGB1P44-201ENST00000508597 VIL1P09327 827 aaKnown RBP6.64□□□□□ -1.35
HMGB1P44-201ENST00000508597 ATP5JP18859 108 aa6.64□□□□□ -1.35
HMGB1P44-201ENST00000508597 ZNF76P36508 570 aa6.64□□□□□ -1.35
HMGB1P44-201ENST00000508597 PHKA1P46020 1223 aa6.64□□□□□ -1.35
HMGB1P44-201ENST00000508597 GYG1P46976 350 aa6.64□□□□□ -1.35
HMGB1P44-201ENST00000508597 CDK8P49336 464 aa6.64□□□□□ -1.35
HMGB1P44-201ENST00000508597 TTF1Q15361 905 aaPredicted RBP6.64□□□□□ -1.35
HMGB1P44-201ENST00000508597 MAP3K11Q16584 847 aa6.64□□□□□ -1.35
HMGB1P44-201ENST00000508597 TTC39AQ5SRH9 613 aa6.64□□□□□ -1.35
HMGB1P44-201ENST00000508597 SPTY2D1Q68D10 685 aaPredicted RBP6.64□□□□□ -1.35
HMGB1P44-201ENST00000508597 TTLL5Q6EMB2 1281 aa6.64□□□□□ -1.35
HMGB1P44-201ENST00000508597 CIAPIN1Q6FI81 312 aa6.64□□□□□ -1.35
HMGB1P44-201ENST00000508597 BEND4Q6ZU67 534 aa6.64□□□□□ -1.35
HMGB1P44-201ENST00000508597 DYMQ7RTS9 669 aa6.64□□□□□ -1.35
HMGB1P44-201ENST00000508597 GPC2Q8N158 579 aa6.64□□□□□ -1.35
HMGB1P44-201ENST00000508597 AGBL3Q8NEM8 1001 aa6.64□□□□□ -1.35
HMGB1P44-201ENST00000508597 DPF2Q92785 391 aa6.64□□□□□ -1.35
HMGB1P44-201ENST00000508597 MRIQ9BWK5 157 aa6.64□□□□□ -1.35
HMGB1P44-201ENST00000508597 CCDC8Q9H0W5 538 aaPredicted RBP6.64□□□□□ -1.35
HMGB1P44-201ENST00000508597 DBNDD1Q9H9R9 158 aa6.64□□□□□ -1.35
HMGB1P44-201ENST00000508597 ECHDC1Q9NTX5 307 aa6.64□□□□□ -1.35
HMGB1P44-201ENST00000508597 STOML1Q9UBI4 398 aa6.64□□□□□ -1.35
HMGB1P44-201ENST00000508597 STAP2Q9UGK3 403 aa6.64□□□□□ -1.35
HMGB1P44-201ENST00000508597 AKAP11Q9UKA4 1901 aa6.64□□□□□ -1.35
HMGB1P44-201ENST00000508597 GLTPD2A6NH11 291 aa6.63□□□□□ -1.35
HMGB1P44-201ENST00000508597 WTIPA6NIX2 430 aaPredicted RBP6.63□□□□□ -1.35
HMGB1P44-201ENST00000508597 YDJCA8MPS7 323 aa6.63□□□□□ -1.35
HMGB1P44-201ENST00000508597 DHX15O43143 795 aaKnown RBP6.63□□□□□ -1.35
HMGB1P44-201ENST00000508597 DYNC1LI2O43237 492 aaPredicted RBP6.63□□□□□ -1.35
HMGB1P44-201ENST00000508597 SMARCA5O60264 1052 aaPredicted RBP6.63□□□□□ -1.35
HMGB1P44-201ENST00000508597 MAST3O60307 1309 aa6.63□□□□□ -1.35
HMGB1P44-201ENST00000508597 MX1P20591 662 aa6.63□□□□□ -1.35
HMGB1P44-201ENST00000508597 KLRK1P26718 216 aa6.63□□□□□ -1.35
HMGB1P44-201ENST00000508597 MAP4P27816 1152 aaKnown RBP6.63□□□□□ -1.35
HMGB1P44-201ENST00000508597 ADORA1P30542 326 aa6.63□□□□□ -1.35
HMGB1P44-201ENST00000508597 PRELPP51888 382 aa6.63□□□□□ -1.35
HMGB1P44-201ENST00000508597 CXCL9Q07325 125 aa6.63□□□□□ -1.35
HMGB1P44-201ENST00000508597 TAF1CQ15572 869 aaPredicted RBP6.63□□□□□ -1.35
HMGB1P44-201ENST00000508597 SCN9AQ15858 1988 aa6.63□□□□□ -1.35
HMGB1P44-201ENST00000508597 KIF4BQ2VIQ3 1234 aa6.63□□□□□ -1.35
HMGB1P44-201ENST00000508597 LRRFIP1Q32MZ4 808 aaKnown RBP6.63□□□□□ -1.35
HMGB1P44-201ENST00000508597 PCNX4Q63HM2 1172 aa6.63□□□□□ -1.35
HMGB1P44-201ENST00000508597 SLC51AQ86UW1 340 aa6.63□□□□□ -1.35
HMGB1P44-201ENST00000508597 TIAM2Q8IVF5 1701 aa6.63□□□□□ -1.35
HMGB1P44-201ENST00000508597 SPATA5Q8NB90 893 aa6.63□□□□□ -1.35
HMGB1P44-201ENST00000508597 RNF34Q969K3 372 aa6.63□□□□□ -1.35
HMGB1P44-201ENST00000508597 GPR101Q96P66 508 aaPredicted RBP6.63□□□□□ -1.35
HMGB1P44-201ENST00000508597 SALL3Q9BXA9 1300 aa6.63□□□□□ -1.35
HMGB1P44-201ENST00000508597 LNPKQ9C0E8 428 aa6.63□□□□□ -1.35
HMGB1P44-201ENST00000508597 CEP44Q9C0F1 390 aa6.63□□□□□ -1.35
HMGB1P44-201ENST00000508597 KCNF1Q9H3M0 494 aa6.63□□□□□ -1.35
HMGB1P44-201ENST00000508597 GSX1Q9H4S2 264 aaPredicted RBP6.63□□□□□ -1.35
HMGB1P44-201ENST00000508597 DISC1Q9NRI5 854 aa6.63□□□□□ -1.35
HMGB1P44-201ENST00000508597 CRIM1Q9NZV1 1036 aa6.63□□□□□ -1.35
HMGB1P44-201ENST00000508597 AP4E1Q9UPM8 1137 aa6.63□□□□□ -1.35
HMGB1P44-201ENST00000508597 PCDHB5Q9Y5E4 795 aa6.63□□□□□ -1.35
HMGB1P44-201ENST00000508597 CSADQ9Y600 493 aa6.63□□□□□ -1.35
HMGB1P44-201ENST00000508597 SCN4AP35499 1836 aa6.62□□□□□ -1.35
HMGB1P44-201ENST00000508597 IQCA1LA6NCM1 817 aa6.62□□□□□ -1.35
HMGB1P44-201ENST00000508597 GAS2O43903 313 aaKnown RBP6.62□□□□□ -1.35
HMGB1P44-201ENST00000508597 NFICP08651 508 aa6.62□□□□□ -1.35
HMGB1P44-201ENST00000508597 FSTP19883 344 aa6.62□□□□□ -1.35
HMGB1P44-201ENST00000508597 MCAMP43121 646 aa6.62□□□□□ -1.35
HMGB1P44-201ENST00000508597 PDE1AP54750 535 aa6.62□□□□□ -1.35
HMGB1P44-201ENST00000508597 RASGRF1Q13972 1273 aa6.62□□□□□ -1.35
HMGB1P44-201ENST00000508597 CCDC85BQ15834 202 aaPredicted RBP6.62□□□□□ -1.35
HMGB1P44-201ENST00000508597 UVSSAQ2YD98 709 aa6.62□□□□□ -1.35
HMGB1P44-201ENST00000508597 DACT2Q5SW24 774 aa6.62□□□□□ -1.35
HMGB1P44-201ENST00000508597 PDZRN4Q6ZMN7 1036 aaPredicted RBP6.62□□□□□ -1.35
HMGB1P44-201ENST00000508597 CERS3Q8IU89 383 aa6.62□□□□□ -1.35
HMGB1P44-201ENST00000508597 HAUS7Q99871 368 aa6.62□□□□□ -1.35
HMGB1P44-201ENST00000508597 FAM83CQ9BQN1 747 aa6.62□□□□□ -1.35
HMGB1P44-201ENST00000508597 HMG20BQ9P0W2 317 aa6.62□□□□□ -1.35
HMGB1P44-201ENST00000508597 HDAC9Q9UKV0 1011 aa6.62□□□□□ -1.35
HMGB1P44-201ENST00000508597 COL4A5P29400 1685 aa6.61□□□□□ -1.35
HMGB1P44-201ENST00000508597 H7C1D1 291 aa6.61□□□□□ -1.35
HMGB1P44-201ENST00000508597 PSMD14O00487 310 aa6.61□□□□□ -1.35
HMGB1P44-201ENST00000508597 RAD17O75943 681 aa6.61□□□□□ -1.35
HMGB1P44-201ENST00000508597 MAP4K4O95819 1239 aaPredicted RBP6.61□□□□□ -1.35
HMGB1P44-201ENST00000508597 LDHCP07864 332 aa6.61□□□□□ -1.35
HMGB1P44-201ENST00000508597 ADMP35318 185 aa6.61□□□□□ -1.35
HMGB1P44-201ENST00000508597 ASPAP45381 313 aa6.61□□□□□ -1.35
HMGB1P44-201ENST00000508597 USP11P51784 963 aa6.61□□□□□ -1.35
HMGB1P44-201ENST00000508597 GSTO1P78417 241 aa6.61□□□□□ -1.35
HMGB1P44-201ENST00000508597 RAD51AP2Q09MP3 1159 aa6.61□□□□□ -1.35
HMGB1P44-201ENST00000508597 MAP3K12Q12852 859 aa6.61□□□□□ -1.35
HMGB1P44-201ENST00000508597 MFSD14BQ5SR56 506 aa6.61□□□□□ -1.35
HMGB1P44-201ENST00000508597 ZSCAN25Q6NSZ9 544 aa6.61□□□□□ -1.35
HMGB1P44-201ENST00000508597 SV2BQ7L1I2 683 aa6.61□□□□□ -1.35
HMGB1P44-201ENST00000508597 CLEC10AQ8IUN9 316 aa6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms