RNA–Protein interactions for RNA: ENST00000508474.5

UBE2D3-224, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 2

Gene UBE2D3, Length 4,819 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-224ENST00000508474 RMDN2Q96LZ7 410 aa7.91□□□□□ -1.14
UBE2D3-224ENST00000508474 FAM210AQ96ND0 272 aa7.91□□□□□ -1.14
UBE2D3-224ENST00000508474 MRPL46Q9H2W6 279 aaKnown RBP7.91□□□□□ -1.14
UBE2D3-224ENST00000508474 NDST4Q9H3R1 872 aa7.91□□□□□ -1.14
UBE2D3-224ENST00000508474 ANLNQ9NQW6 1124 aa7.91□□□□□ -1.14
UBE2D3-224ENST00000508474 ATP8A2Q9NTI2 1148 aa7.91□□□□□ -1.14
UBE2D3-224ENST00000508474 SYNGAP1Q96PV0 1343 aa7.91□□□□□ -1.14
UBE2D3-224ENST00000508474 ADGBQ8N7X0 1667 aa7.91□□□□□ -1.14
UBE2D3-224ENST00000508474 E7ENQ6 273 aa7.91□□□□□ -1.14
UBE2D3-224ENST00000508474 HSPA8P11142 646 aaKnown RBP7.91□□□□□ -1.14
UBE2D3-224ENST00000508474 ZAP70P43403 619 aa7.91□□□□□ -1.14
UBE2D3-224ENST00000508474 BPIFB4P59827 614 aa7.91□□□□□ -1.14
UBE2D3-224ENST00000508474 ACBD5Q5T8D3 534 aaPredicted RBP7.91□□□□□ -1.14
UBE2D3-224ENST00000508474 RHOT2Q8IXI1 618 aa7.91□□□□□ -1.14
UBE2D3-224ENST00000508474 LRRC43Q8N309 656 aa7.91□□□□□ -1.14
UBE2D3-224ENST00000508474 ENAHQ8N8S7 591 aaPredicted RBP7.91□□□□□ -1.14
UBE2D3-224ENST00000508474 ICA1LQ8NDH6 482 aa7.91□□□□□ -1.14
UBE2D3-224ENST00000508474 DNAJC9Q8WXX5 260 aa7.91□□□□□ -1.14
UBE2D3-224ENST00000508474 AZI2Q9H6S1 392 aa7.91□□□□□ -1.14
UBE2D3-224ENST00000508474 ATP6V0A4Q9HBG4 840 aa7.91□□□□□ -1.14
UBE2D3-224ENST00000508474 NOD2Q9HC29 1040 aa7.91□□□□□ -1.14
UBE2D3-224ENST00000508474 EIF2AK3Q9NZJ5 1116 aaKnown RBP7.91□□□□□ -1.14
UBE2D3-224ENST00000508474 NDUFA13Q9P0J0 144 aa7.91□□□□□ -1.14
UBE2D3-224ENST00000508474 MID2Q9UJV3 735 aa7.91□□□□□ -1.14
UBE2D3-224ENST00000508474 POGZQ7Z3K3 1410 aa7.91□□□□□ -1.14
UBE2D3-224ENST00000508474 MYOM2P54296 1465 aa7.91□□□□□ -1.14
UBE2D3-224ENST00000508474 RAPGEF3O95398 923 aa7.91□□□□□ -1.14
UBE2D3-224ENST00000508474 ACTN1P12814 892 aa7.91□□□□□ -1.14
UBE2D3-224ENST00000508474 YWHAGP61981 247 aaKnown RBP eCLIP7.91□□□□□ -1.14
UBE2D3-224ENST00000508474 MRPS9P82933 396 aaKnown RBP7.91□□□□□ -1.14
UBE2D3-224ENST00000508474 MESDQ14696 234 aa7.91□□□□□ -1.14
UBE2D3-224ENST00000508474 C1orf146Q5VVC0 180 aa7.91□□□□□ -1.14
UBE2D3-224ENST00000508474 SPATA21Q7Z572 469 aa7.91□□□□□ -1.14
UBE2D3-224ENST00000508474 SPATA4Q8NEY3 305 aa7.91□□□□□ -1.14
UBE2D3-224ENST00000508474 CYFIP2Q96F07 1278 aa7.91□□□□□ -1.14
UBE2D3-224ENST00000508474 DCAF5Q96JK2 942 aa7.91□□□□□ -1.14
UBE2D3-224ENST00000508474 FAM81BQ96LP2 452 aa7.91□□□□□ -1.14
UBE2D3-224ENST00000508474 TTC25Q96NG3 672 aa7.91□□□□□ -1.14
UBE2D3-224ENST00000508474 TGS1Q96RS0 853 aaKnown RBP7.91□□□□□ -1.14
UBE2D3-224ENST00000508474 CYTH2Q99418 400 aa7.91□□□□□ -1.14
UBE2D3-224ENST00000508474 TRIM56Q9BRZ2 755 aaKnown RBP7.91□□□□□ -1.14
UBE2D3-224ENST00000508474 TRIM15Q9C019 465 aa7.91□□□□□ -1.14
UBE2D3-224ENST00000508474 VCPKMTQ9H867 229 aa7.91□□□□□ -1.14
UBE2D3-224ENST00000508474 INTUQ9ULD6 942 aa7.91□□□□□ -1.14
UBE2D3-224ENST00000508474 CCT8L1PA6NM43 557 aa7.91□□□□□ -1.14
UBE2D3-224ENST00000508474 MYO1FO00160 1098 aa7.91□□□□□ -1.14
UBE2D3-224ENST00000508474 MCF2LO15068 1137 aa7.91□□□□□ -1.14
UBE2D3-224ENST00000508474 NVLO15381 856 aaKnown RBP7.91□□□□□ -1.14
UBE2D3-224ENST00000508474 GPC4O75487 556 aa7.91□□□□□ -1.14
UBE2D3-224ENST00000508474 LDHBP07195 334 aaKnown RBP7.91□□□□□ -1.14
UBE2D3-224ENST00000508474 ACADSP16219 412 aa7.91□□□□□ -1.14
UBE2D3-224ENST00000508474 PTGISQ16647 500 aa7.91□□□□□ -1.14
UBE2D3-224ENST00000508474 TMCO4Q5TGY1 634 aa7.91□□□□□ -1.14
UBE2D3-224ENST00000508474 DAB2IPQ5VWQ8 1189 aa7.91□□□□□ -1.14
UBE2D3-224ENST00000508474 ARL6IP4Q66PJ3 421 aaKnown RBP7.91□□□□□ -1.14
UBE2D3-224ENST00000508474 CENPUQ71F23 418 aa7.91□□□□□ -1.14
UBE2D3-224ENST00000508474 EPM2AIP1Q7L775 607 aaPredicted RBP7.91□□□□□ -1.14
UBE2D3-224ENST00000508474 CRLF3Q8IUI8 442 aa7.91□□□□□ -1.14
UBE2D3-224ENST00000508474 SMYD4Q8IYR2 804 aaPredicted RBP7.91□□□□□ -1.14
UBE2D3-224ENST00000508474 AP1M1Q9BXS5 423 aa7.91□□□□□ -1.14
UBE2D3-224ENST00000508474 UPF3AQ9H1J1 476 aaKnown RBP7.91□□□□□ -1.14
UBE2D3-224ENST00000508474 TRAF3IP3Q9Y228 551 aa7.91□□□□□ -1.14
UBE2D3-224ENST00000508474 FANCAO15360 1455 aa7.91□□□□□ -1.14
UBE2D3-224ENST00000508474 SMCO2A6NFE2 343 aa7.9□□□□□ -1.14
UBE2D3-224ENST00000508474 FOXP2O15409 715 aa7.9□□□□□ -1.14
UBE2D3-224ENST00000508474 PALMO75781 387 aa7.9□□□□□ -1.14
UBE2D3-224ENST00000508474 ESRRBO95718 433 aa7.9□□□□□ -1.14
UBE2D3-224ENST00000508474 IFNAR1P17181 557 aa7.9□□□□□ -1.14
UBE2D3-224ENST00000508474 KCNA3P22001 575 aa7.9□□□□□ -1.14
UBE2D3-224ENST00000508474 HSPA9P38646 679 aaKnown RBP7.9□□□□□ -1.14
UBE2D3-224ENST00000508474 INPP1P49441 399 aa7.9□□□□□ -1.14
UBE2D3-224ENST00000508474 NEK2P51955 445 aa7.9□□□□□ -1.14
UBE2D3-224ENST00000508474 HDLBPQ00341 1268 aaKnown RBP7.9□□□□□ -1.14
UBE2D3-224ENST00000508474 PTPROQ16827 1216 aa7.9□□□□□ -1.14
UBE2D3-224ENST00000508474 AOC3Q16853 763 aa7.9□□□□□ -1.14
UBE2D3-224ENST00000508474 WDR93Q6P2C0 686 aa7.9□□□□□ -1.14
UBE2D3-224ENST00000508474 CAPN12Q6ZSI9 719 aa7.9□□□□□ -1.14
UBE2D3-224ENST00000508474 SLFN12Q8IYM2 578 aa7.9□□□□□ -1.14
UBE2D3-224ENST00000508474 IFNL3Q8IZI9 196 aa7.9□□□□□ -1.14
UBE2D3-224ENST00000508474 COPRSQ9NQ92 184 aa7.9□□□□□ -1.14
UBE2D3-224ENST00000508474 ITIH6Q6UXX5 1313 aa7.9□□□□□ -1.14
UBE2D3-224ENST00000508474 RPAP1Q9BWH6 1393 aaPredicted RBP7.9□□□□□ -1.14
UBE2D3-224ENST00000508474 HOXC9P31274 260 aa7.9□□□□□ -1.14
UBE2D3-224ENST00000508474 TECP42680 631 aa7.9□□□□□ -1.14
UBE2D3-224ENST00000508474 STX1BP61266 288 aa7.9□□□□□ -1.14
UBE2D3-224ENST00000508474 SLC44A4Q53GD3 710 aa7.9□□□□□ -1.14
UBE2D3-224ENST00000508474 CYP4F22Q6NT55 531 aa7.9□□□□□ -1.14
UBE2D3-224ENST00000508474 KDM7AQ6ZMT4 941 aa7.9□□□□□ -1.14
UBE2D3-224ENST00000508474 SPATA5Q8NB90 893 aa7.9□□□□□ -1.14
UBE2D3-224ENST00000508474 CCDC124Q96CT7 223 aaKnown RBP7.9□□□□□ -1.14
UBE2D3-224ENST00000508474 TBC1D23Q9NUY8 699 aa7.9□□□□□ -1.14
UBE2D3-224ENST00000508474 CEP72Q9P209 647 aa7.9□□□□□ -1.14
UBE2D3-224ENST00000508474 USP15Q9Y4E8 981 aaPredicted RBP7.9□□□□□ -1.14
UBE2D3-224ENST00000508474 ORC6Q9Y5N6 252 aa7.9□□□□□ -1.14
UBE2D3-224ENST00000508474 YTHDC2Q9H6S0 1430 aaKnown RBP7.9□□□□□ -1.14
UBE2D3-224ENST00000508474 FGGP02679 453 aa7.9□□□□□ -1.15
UBE2D3-224ENST00000508474 ATF7P17544 494 aaPredicted RBP7.9□□□□□ -1.15
UBE2D3-224ENST00000508474 PTPREP23469 700 aa7.9□□□□□ -1.15
UBE2D3-224ENST00000508474 EIF4A1P60842 406 aaKnown RBP7.9□□□□□ -1.15
UBE2D3-224ENST00000508474 LAMB3Q13751 1172 aa7.9□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms