RNA–Protein interactions for RNA: ENST00000508304.5

TRAPPC13-209, Transcript of trafficking protein particle complex 13, humanhuman

TSL 2

Gene TRAPPC13, Length 729 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-209ENST00000508304 ARNTLO00327 626 aa7.37□□□□□ -1.23
TRAPPC13-209ENST00000508304 NOP56O00567 594 aaKnown RBP7.37□□□□□ -1.23
TRAPPC13-209ENST00000508304 GTF2A2P52657 109 aa7.37□□□□□ -1.23
TRAPPC13-209ENST00000508304 R3HDM1Q15032 1099 aaKnown RBP7.37□□□□□ -1.23
TRAPPC13-209ENST00000508304 E4F1Q66K89 784 aaPredicted RBP7.37□□□□□ -1.23
TRAPPC13-209ENST00000508304 CCDC103Q8IW40 242 aa7.37□□□□□ -1.23
TRAPPC13-209ENST00000508304 ZCCHC14Q8WYQ9 949 aaKnown RBP7.37□□□□□ -1.23
TRAPPC13-209ENST00000508304 TRMT2BQ96GJ1 504 aaKnown RBP7.37□□□□□ -1.23
TRAPPC13-209ENST00000508304 WWC2-AS2Q96NR7 200 aa7.37□□□□□ -1.23
TRAPPC13-209ENST00000508304 CLIC6Q96NY7 704 aa7.37□□□□□ -1.23
TRAPPC13-209ENST00000508304 YIPF4Q9BSR8 244 aa7.37□□□□□ -1.23
TRAPPC13-209ENST00000508304 DTLQ9NZJ0 730 aa7.37□□□□□ -1.23
TRAPPC13-209ENST00000508304 PATE3B3GLJ2 98 aa7.36□□□□□ -1.23
TRAPPC13-209ENST00000508304 NAT2P11245 290 aa7.36□□□□□ -1.23
TRAPPC13-209ENST00000508304 BCL6P41182 706 aa7.36□□□□□ -1.23
TRAPPC13-209ENST00000508304 ZNF585AQ6P3V2 769 aa7.36□□□□□ -1.23
TRAPPC13-209ENST00000508304 KBTBD2Q8IY47 623 aa7.36□□□□□ -1.23
TRAPPC13-209ENST00000508304 TOE1Q96GM8 510 aaKnown RBP7.36□□□□□ -1.23
TRAPPC13-209ENST00000508304 LGR4Q9BXB1 951 aa7.36□□□□□ -1.23
TRAPPC13-209ENST00000508304 SLITRK6Q9H5Y7 841 aa7.36□□□□□ -1.23
TRAPPC13-209ENST00000508304 TMEFF2Q9UIK5 374 aaPredicted RBP7.36□□□□□ -1.23
TRAPPC13-209ENST00000508304 ZBTB7CA1YPR0 619 aa7.35□□□□□ -1.23
TRAPPC13-209ENST00000508304 CYP7B1O75881 506 aa7.35□□□□□ -1.23
TRAPPC13-209ENST00000508304 AMHP03971 560 aa7.35□□□□□ -1.23
TRAPPC13-209ENST00000508304 SELENOPP49908 381 aa7.35□□□□□ -1.23
TRAPPC13-209ENST00000508304 TEPPQ6URK8 271 aa7.35□□□□□ -1.23
TRAPPC13-209ENST00000508304 ARHGEF18Q6ZSZ5 1173 aa7.35□□□□□ -1.23
TRAPPC13-209ENST00000508304 USP51Q70EK9 711 aa7.35□□□□□ -1.23
TRAPPC13-209ENST00000508304 PALM2Q8IXS6 379 aa7.35□□□□□ -1.23
TRAPPC13-209ENST00000508304 FAM169BQ8N8A8 192 aa7.35□□□□□ -1.23
TRAPPC13-209ENST00000508304 ARRDC4Q8NCT1 418 aa7.35□□□□□ -1.23
TRAPPC13-209ENST00000508304 DIO2Q92813 273 aa7.35□□□□□ -1.23
TRAPPC13-209ENST00000508304 PCED1AQ9H1Q7 454 aa7.35□□□□□ -1.23
TRAPPC13-209ENST00000508304 DEF6Q9H4E7 631 aa7.35□□□□□ -1.23
TRAPPC13-209ENST00000508304 FBXL7Q9UJT9 491 aa7.35□□□□□ -1.23
TRAPPC13-209ENST00000508304 TCRBV5S2A0A599 114 aa7.34□□□□□ -1.23
TRAPPC13-209ENST00000508304 HGSO14964 777 aaPredicted RBP7.34□□□□□ -1.23
TRAPPC13-209ENST00000508304 GJA8P48165 433 aa7.34□□□□□ -1.23
TRAPPC13-209ENST00000508304 NASPP49321 788 aaPredicted RBP7.34□□□□□ -1.23
TRAPPC13-209ENST00000508304 KCNAB2Q13303 367 aa7.34□□□□□ -1.23
TRAPPC13-209ENST00000508304 CHRNA2Q15822 529 aa7.34□□□□□ -1.23
TRAPPC13-209ENST00000508304 SLFN13Q68D06 897 aa7.34□□□□□ -1.23
TRAPPC13-209ENST00000508304 METTL16Q86W50 562 aaKnown RBP7.34□□□□□ -1.23
TRAPPC13-209ENST00000508304 KLHL36Q8N4N3 616 aa7.34□□□□□ -1.23
TRAPPC13-209ENST00000508304 TMEM169Q96HH4 297 aa7.34□□□□□ -1.23
TRAPPC13-209ENST00000508304 TMEM209Q96SK2 561 aa7.34□□□□□ -1.23
TRAPPC13-209ENST00000508304 PTPN18Q99952 460 aa7.34□□□□□ -1.23
TRAPPC13-209ENST00000508304 WASF3Q9UPY6 502 aa7.34□□□□□ -1.23
TRAPPC13-209ENST00000508304 COA3Q9Y2R0 106 aaPredicted RBP7.34□□□□□ -1.23
TRAPPC13-209ENST00000508304 MYO1BO43795 1136 aa7.33□□□□□ -1.24
TRAPPC13-209ENST00000508304 TADA3O75528 432 aa7.33□□□□□ -1.24
TRAPPC13-209ENST00000508304 LRG1P02750 347 aa7.33□□□□□ -1.24
TRAPPC13-209ENST00000508304 TESK1Q15569 626 aa7.33□□□□□ -1.24
TRAPPC13-209ENST00000508304 EMC4Q5J8M3 183 aa7.33□□□□□ -1.24
TRAPPC13-209ENST00000508304 BTN2A2Q8WVV5 523 aa7.33□□□□□ -1.24
TRAPPC13-209ENST00000508304 WRNIP1Q96S55 665 aa7.33□□□□□ -1.24
TRAPPC13-209ENST00000508304 MEGF9Q9H1U4 602 aa7.33□□□□□ -1.24
TRAPPC13-209ENST00000508304 CROTQ9UKG9 612 aa7.33□□□□□ -1.24
TRAPPC13-209ENST00000508304 TCAF1Q9Y4C2 921 aa7.33□□□□□ -1.24
TRAPPC13-209ENST00000508304 PCDHB4Q9Y5E5 795 aa7.33□□□□□ -1.24
TRAPPC13-209ENST00000508304 SCAMP3O14828 347 aaKnown RBP7.32□□□□□ -1.24
TRAPPC13-209ENST00000508304 RECKO95980 971 aa7.32□□□□□ -1.24
TRAPPC13-209ENST00000508304 SCG5P05408 212 aa7.32□□□□□ -1.24
TRAPPC13-209ENST00000508304 NFATC3Q12968 1075 aa7.32□□□□□ -1.24
TRAPPC13-209ENST00000508304 NCAPHQ15003 741 aa7.32□□□□□ -1.24
TRAPPC13-209ENST00000508304 KREMEN2Q8NCW0 462 aa7.32□□□□□ -1.24
TRAPPC13-209ENST00000508304 RCBTB1Q8NDN9 531 aa7.32□□□□□ -1.24
TRAPPC13-209ENST00000508304 PPP1R14AQ96A00 147 aa7.32□□□□□ -1.24
TRAPPC13-209ENST00000508304 SEMA4AQ9H3S1 761 aa7.32□□□□□ -1.24
TRAPPC13-209ENST00000508304 JADE2Q9NQC1 790 aa7.32□□□□□ -1.24
TRAPPC13-209ENST00000508304 FTSJ1Q9UET6 329 aa7.32□□□□□ -1.24
TRAPPC13-209ENST00000508304 TESMINQ9Y4I5 508 aa7.32□□□□□ -1.24
TRAPPC13-209ENST00000508304 H7BY64 318 aa7.31□□□□□ -1.24
TRAPPC13-209ENST00000508304 MUSKO15146 869 aa7.31□□□□□ -1.24
TRAPPC13-209ENST00000508304 MEFVO15553 781 aaPredicted RBP7.31□□□□□ -1.24
TRAPPC13-209ENST00000508304 TBX1O43435 398 aa7.31□□□□□ -1.24
TRAPPC13-209ENST00000508304 B4GALT4O60513 344 aa7.31□□□□□ -1.24
TRAPPC13-209ENST00000508304 HOXC12P31275 282 aa7.31□□□□□ -1.24
TRAPPC13-209ENST00000508304 SPDYAQ5MJ70 313 aa7.31□□□□□ -1.24
TRAPPC13-209ENST00000508304 ACBD5Q5T8D3 534 aaPredicted RBP7.31□□□□□ -1.24
TRAPPC13-209ENST00000508304 STEAP3Q658P3 488 aa7.31□□□□□ -1.24
TRAPPC13-209ENST00000508304 CPLX3Q8WVH0 158 aa7.31□□□□□ -1.24
TRAPPC13-209ENST00000508304 HSPBP1Q9NZL4 362 aa7.31□□□□□ -1.24
TRAPPC13-209ENST00000508304 ZNF623O75123 536 aa7.3□□□□□ -1.24
TRAPPC13-209ENST00000508304 COL6A1P12109 1028 aa7.3□□□□□ -1.24
TRAPPC13-209ENST00000508304 Q8TCH9 128 aa7.3□□□□□ -1.24
TRAPPC13-209ENST00000508304 BARX1Q9HBU1 254 aaPredicted RBP7.3□□□□□ -1.24
TRAPPC13-209ENST00000508304 ADAM29Q9UKF5 820 aa7.3□□□□□ -1.24
TRAPPC13-209ENST00000508304 ECI1P42126 302 aa7.29□□□□□ -1.24
TRAPPC13-209ENST00000508304 KLF10Q13118 480 aa7.29□□□□□ -1.24
TRAPPC13-209ENST00000508304 LSAMPQ13449 338 aa7.29□□□□□ -1.24
TRAPPC13-209ENST00000508304 CRB2Q5IJ48 1285 aa7.29□□□□□ -1.24
TRAPPC13-209ENST00000508304 TRMT10BQ6PF06 316 aaKnown RBP7.29□□□□□ -1.24
TRAPPC13-209ENST00000508304 PPIL4Q8WUA2 492 aaKnown RBP eCLIP7.29□□□□□ -1.24
TRAPPC13-209ENST00000508304 SEC16BQ96JE7 1060 aa7.29□□□□□ -1.24
TRAPPC13-209ENST00000508304 HS3ST3A1Q9Y663 406 aa7.29□□□□□ -1.24
TRAPPC13-209ENST00000508304 SNRPB2P08579 225 aaKnown RBP7.28□□□□□ -1.24
TRAPPC13-209ENST00000508304 VAMP1P23763 118 aa7.28□□□□□ -1.24
TRAPPC13-209ENST00000508304 TMCO4Q5TGY1 634 aa7.28□□□□□ -1.24
TRAPPC13-209ENST00000508304 TMC5Q6UXY8 1006 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms