RNA–Protein interactions for RNA: ENST00000508249.1

UBE2D3-223, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 604 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-223ENST00000508249 BAATQ14032 418 aaPredicted RBP10.76□□□□□ -0.69
UBE2D3-223ENST00000508249 TIGD5Q53EQ6 642 aa10.76□□□□□ -0.69
UBE2D3-223ENST00000508249 RCSD1Q6JBY9 416 aa10.76□□□□□ -0.69
UBE2D3-223ENST00000508249 FAM117BQ6P1L5 589 aa10.76□□□□□ -0.69
UBE2D3-223ENST00000508249 NSMFQ6X4W1 530 aa10.76□□□□□ -0.69
UBE2D3-223ENST00000508249 KCTD1Q719H9 257 aa10.76□□□□□ -0.69
UBE2D3-223ENST00000508249 FAM160B2Q86V87 743 aa10.76□□□□□ -0.69
UBE2D3-223ENST00000508249 IQCA1Q86XH1 822 aa10.76□□□□□ -0.69
UBE2D3-223ENST00000508249 BANK1Q8NDB2 785 aa10.76□□□□□ -0.69
UBE2D3-223ENST00000508249 CLEC4DQ8WXI8 215 aa10.76□□□□□ -0.69
UBE2D3-223ENST00000508249 CHMP4CQ96CF2 233 aa10.76□□□□□ -0.69
UBE2D3-223ENST00000508249 ZBED2Q9BTP6 218 aa10.76□□□□□ -0.69
UBE2D3-223ENST00000508249 OSBPL7Q9BZF2 842 aa10.76□□□□□ -0.69
UBE2D3-223ENST00000508249 FAM86C1Q9NVL1 165 aa10.76□□□□□ -0.69
UBE2D3-223ENST00000508249 STX8Q9UNK0 236 aa10.76□□□□□ -0.69
UBE2D3-223ENST00000508249 CTDP1Q9Y5B0 961 aaPredicted RBP10.76□□□□□ -0.69
UBE2D3-223ENST00000508249 KMT2BQ9UMN6 2715 aaPredicted RBP10.76□□□□□ -0.69
UBE2D3-223ENST00000508249 PLXNA4Q9HCM2 1894 aa10.75□□□□□ -0.69
UBE2D3-223ENST00000508249 LOC102724159A0A0B4J2E5 919 aa10.75□□□□□ -0.69
UBE2D3-223ENST00000508249 H3BNC9 293 aa10.75□□□□□ -0.69
UBE2D3-223ENST00000508249 MBTPS2O43462 519 aa10.75□□□□□ -0.69
UBE2D3-223ENST00000508249 CDC45O75419 566 aa10.75□□□□□ -0.69
UBE2D3-223ENST00000508249 ICAM1P05362 532 aa10.75□□□□□ -0.69
UBE2D3-223ENST00000508249 PTPN5P54829 565 aa10.75□□□□□ -0.69
UBE2D3-223ENST00000508249 HAND2P61296 217 aa10.75□□□□□ -0.69
UBE2D3-223ENST00000508249 PWP2Q15269 919 aaKnown RBP10.75□□□□□ -0.69
UBE2D3-223ENST00000508249 CCDC62Q6P9F0 684 aa10.75□□□□□ -0.69
UBE2D3-223ENST00000508249 RPAINQ86UA6 219 aa10.75□□□□□ -0.69
UBE2D3-223ENST00000508249 DGKHQ86XP1 1220 aa10.75□□□□□ -0.69
UBE2D3-223ENST00000508249 RNF135Q8IUD6 432 aa10.75□□□□□ -0.69
UBE2D3-223ENST00000508249 EDAQ92838 391 aa10.75□□□□□ -0.69
UBE2D3-223ENST00000508249 MFSD14AQ96MC6 490 aa10.75□□□□□ -0.69
UBE2D3-223ENST00000508249 ESYT1Q9BSJ8 1104 aa10.75□□□□□ -0.69
UBE2D3-223ENST00000508249 RANBP17Q9H2T7 1088 aaKnown RBP10.75□□□□□ -0.69
UBE2D3-223ENST00000508249 GTF2IRD1Q9UHL9 959 aa10.75□□□□□ -0.69
UBE2D3-223ENST00000508249 GVINP1Q7Z2Y8 2422 aa10.75□□□□□ -0.69
UBE2D3-223ENST00000508249 LAMA4Q16363 1823 aa10.74□□□□□ -0.69
UBE2D3-223ENST00000508249 GFRA3O60609 400 aa10.74□□□□□ -0.69
UBE2D3-223ENST00000508249 EIF5BO60841 1220 aaKnown RBP10.74□□□□□ -0.69
UBE2D3-223ENST00000508249 MMP3P08254 477 aa10.74□□□□□ -0.69
UBE2D3-223ENST00000508249 TOP1P11387 765 aaKnown RBP10.74□□□□□ -0.69
UBE2D3-223ENST00000508249 MCCP23508 829 aa10.74□□□□□ -0.69
UBE2D3-223ENST00000508249 VCPP55072 806 aaKnown RBP10.74□□□□□ -0.69
UBE2D3-223ENST00000508249 ARHGAP1Q07960 439 aa10.74□□□□□ -0.69
UBE2D3-223ENST00000508249 HYAL1Q12794 435 aa10.74□□□□□ -0.69
UBE2D3-223ENST00000508249 PPP2R5BQ15173 497 aa10.74□□□□□ -0.69
UBE2D3-223ENST00000508249 RRP12Q5JTH9 1297 aaKnown RBP10.74□□□□□ -0.69
UBE2D3-223ENST00000508249 ZNF618Q5T7W0 954 aa10.74□□□□□ -0.69
UBE2D3-223ENST00000508249 TBC1D10CQ8IV04 446 aa10.74□□□□□ -0.69
UBE2D3-223ENST00000508249 CHURC1Q8WUH1 139 aa10.74□□□□□ -0.69
UBE2D3-223ENST00000508249 DCAF4Q8WV16 495 aa10.74□□□□□ -0.69
UBE2D3-223ENST00000508249 MAP4K1Q92918 833 aa10.74□□□□□ -0.69
UBE2D3-223ENST00000508249 MTA3Q9BTC8 594 aa10.74□□□□□ -0.69
UBE2D3-223ENST00000508249 NSUN3Q9H649 340 aaKnown RBP10.74□□□□□ -0.69
UBE2D3-223ENST00000508249 IL17RBQ9NRM6 502 aa10.74□□□□□ -0.69
UBE2D3-223ENST00000508249 PNMA2Q9UL42 364 aa10.74□□□□□ -0.69
UBE2D3-223ENST00000508249 CCPG1Q9ULG6 757 aa10.74□□□□□ -0.69
UBE2D3-223ENST00000508249 INSL6Q9Y581 213 aa10.74□□□□□ -0.69
UBE2D3-223ENST00000508249 FAM186AA6NE01 2351 aa10.74□□□□□ -0.69
UBE2D3-223ENST00000508249 RIF1Q5UIP0 2472 aaKnown RBP10.73□□□□□ -0.69
UBE2D3-223ENST00000508249 DOCK5Q9H7D0 1870 aa10.73□□□□□ -0.69
UBE2D3-223ENST00000508249 TMEM221A6NGB7 291 aa10.73□□□□□ -0.69
UBE2D3-223ENST00000508249 M0R296 226 aa10.73□□□□□ -0.69
UBE2D3-223ENST00000508249 HAS3O00219 553 aa10.73□□□□□ -0.69
UBE2D3-223ENST00000508249 NKRFO15226 690 aaKnown RBP eCLIP10.73□□□□□ -0.69
UBE2D3-223ENST00000508249 EPB41L2O43491 1005 aaKnown RBP10.73□□□□□ -0.69
UBE2D3-223ENST00000508249 NMT2O60551 498 aa10.73□□□□□ -0.69
UBE2D3-223ENST00000508249 KPNA6O60684 536 aa10.73□□□□□ -0.69
UBE2D3-223ENST00000508249 GTF2F1P35269 517 aaKnown RBP eCLIP10.73□□□□□ -0.697e-7■■■□□ 15.7
UBE2D3-223ENST00000508249 SLC1A4P43007 532 aa10.73□□□□□ -0.69
UBE2D3-223ENST00000508249 CLUL1Q15846 466 aa10.73□□□□□ -0.69
UBE2D3-223ENST00000508249 RNF20Q5VTR2 975 aa10.73□□□□□ -0.69
UBE2D3-223ENST00000508249 RALYLQ86SE5 291 aaKnown RBP10.73□□□□□ -0.69
UBE2D3-223ENST00000508249 FBXO11Q86XK2 927 aa10.73□□□□□ -0.69
UBE2D3-223ENST00000508249 SCFD2Q8WU76 684 aa10.73□□□□□ -0.69
UBE2D3-223ENST00000508249 AFG1LQ8WV93 481 aa10.73□□□□□ -0.69
UBE2D3-223ENST00000508249 RC3H2Q9HBD1 1191 aaKnown RBP10.73□□□□□ -0.69
UBE2D3-223ENST00000508249 GPHNQ9NQX3 736 aaPredicted RBP10.73□□□□□ -0.69
UBE2D3-223ENST00000508249 CLDND1Q9NY35 253 aa10.73□□□□□ -0.69
UBE2D3-223ENST00000508249 HDAC6Q9UBN7 1215 aa10.73□□□□□ -0.69
UBE2D3-223ENST00000508249 MYH6P13533 1939 aa10.73□□□□□ -0.69
UBE2D3-223ENST00000508249 LINC01565O15544 149 aa10.72□□□□□ -0.69
UBE2D3-223ENST00000508249 EFCAB14O75071 495 aa10.72□□□□□ -0.69
UBE2D3-223ENST00000508249 RGS20O76081 388 aa10.72□□□□□ -0.69
UBE2D3-223ENST00000508249 PARNO95453 639 aaKnown RBP10.72□□□□□ -0.69
UBE2D3-223ENST00000508249 F2P00734 622 aa10.72□□□□□ -0.69
UBE2D3-223ENST00000508249 ZNF200P98182 395 aaPredicted RBP10.72□□□□□ -0.69
UBE2D3-223ENST00000508249 GPM6BQ13491 265 aa10.72□□□□□ -0.69
UBE2D3-223ENST00000508249 IKBKEQ14164 716 aa10.72□□□□□ -0.69
UBE2D3-223ENST00000508249 SART3Q15020 963 aaKnown RBP10.72□□□□□ -0.69
UBE2D3-223ENST00000508249 TTBK2Q6IQ55 1244 aa10.72□□□□□ -0.69
UBE2D3-223ENST00000508249 BTNL9Q6UXG8 535 aa10.72□□□□□ -0.69
UBE2D3-223ENST00000508249 TRIM67Q6ZTA4 783 aa10.72□□□□□ -0.69
UBE2D3-223ENST00000508249 CCDC155Q8N6L0 562 aa10.72□□□□□ -0.69
UBE2D3-223ENST00000508249 NCOA7Q8NI08 942 aa10.72□□□□□ -0.69
UBE2D3-223ENST00000508249 ASIC4Q96FT7 647 aa10.72□□□□□ -0.69
UBE2D3-223ENST00000508249 MSLNLQ96KJ4 702 aa10.72□□□□□ -0.69
UBE2D3-223ENST00000508249 UBAC1Q9BSL1 405 aa10.72□□□□□ -0.69
UBE2D3-223ENST00000508249 IL25Q9H293 177 aa10.72□□□□□ -0.69
UBE2D3-223ENST00000508249 ADD3Q9UEY8 706 aaKnown RBP10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms