RNA–Protein interactions for RNA: ENST00000508216.5

PDLIM5-210, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 1,794 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-210ENST00000508216 LCA5LO95447 670 aa11.79□□□□□ -0.52
PDLIM5-210ENST00000508216 KRT14P02533 472 aa11.79□□□□□ -0.52
PDLIM5-210ENST00000508216 GOLGA8HP0CJ92 632 aa11.79□□□□□ -0.52
PDLIM5-210ENST00000508216 NQO1P15559 274 aaKnown RBP11.79□□□□□ -0.52
PDLIM5-210ENST00000508216 RFC5P40937 340 aa11.79□□□□□ -0.52
PDLIM5-210ENST00000508216 PDE6CP51160 858 aa11.79□□□□□ -0.52
PDLIM5-210ENST00000508216 MTMR3Q13615 1198 aa11.79□□□□□ -0.52
PDLIM5-210ENST00000508216 DPYSQ14117 519 aa11.79□□□□□ -0.52
PDLIM5-210ENST00000508216 E2F2Q14209 437 aa11.79□□□□□ -0.52
PDLIM5-210ENST00000508216 DDB1Q16531 1140 aa11.79□□□□□ -0.52
PDLIM5-210ENST00000508216 ARL13BQ3SXY8 428 aa11.79□□□□□ -0.52
PDLIM5-210ENST00000508216 KRT77Q7Z794 578 aa11.79□□□□□ -0.52
PDLIM5-210ENST00000508216 VSTM4Q8IW00 320 aa11.79□□□□□ -0.52
PDLIM5-210ENST00000508216 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP11.79□□□□□ -0.52
PDLIM5-210ENST00000508216 SCYL1Q96KG9 808 aa11.79□□□□□ -0.52
PDLIM5-210ENST00000508216 GIT1Q9Y2X7 761 aa11.79□□□□□ -0.52
PDLIM5-210ENST00000508216 NFE2L3Q9Y4A8 694 aa11.79□□□□□ -0.52
PDLIM5-210ENST00000508216 CEP152O94986 1710 aa11.79□□□□□ -0.52
PDLIM5-210ENST00000508216 ADCY9O60503 1353 aa11.79□□□□□ -0.52
PDLIM5-210ENST00000508216 DISP3Q9P2K9 1392 aa11.79□□□□□ -0.52
PDLIM5-210ENST00000508216 LOC105371267A0A1B0GV96 52 aa11.79□□□□□ -0.52
PDLIM5-210ENST00000508216 MAGEA13PA6NCF6 341 aa11.79□□□□□ -0.52
PDLIM5-210ENST00000508216 B4GALT4O60513 344 aa11.79□□□□□ -0.52
PDLIM5-210ENST00000508216 LDHBP07195 334 aaKnown RBP11.79□□□□□ -0.52
PDLIM5-210ENST00000508216 SDSP20132 328 aa11.79□□□□□ -0.52
PDLIM5-210ENST00000508216 NR1D1P20393 614 aa11.79□□□□□ -0.52
PDLIM5-210ENST00000508216 PDCP20941 246 aa11.79□□□□□ -0.52
PDLIM5-210ENST00000508216 DR1Q01658 176 aa11.79□□□□□ -0.52
PDLIM5-210ENST00000508216 BIRC3Q13489 604 aa11.79□□□□□ -0.52
PDLIM5-210ENST00000508216 ITGA9Q13797 1035 aa11.79□□□□□ -0.52
PDLIM5-210ENST00000508216 CFAP58Q5T655 872 aa11.79□□□□□ -0.52
PDLIM5-210ENST00000508216 PCGF5Q86SE9 256 aa11.79□□□□□ -0.52
PDLIM5-210ENST00000508216 MCF2L2Q86YR7 1114 aa11.79□□□□□ -0.52
PDLIM5-210ENST00000508216 TMEM57Q8N5G2 664 aa11.79□□□□□ -0.52
PDLIM5-210ENST00000508216 ZNF713Q8N859 430 aaPredicted RBP11.79□□□□□ -0.52
PDLIM5-210ENST00000508216 ENDOVQ8N8Q3 282 aaKnown RBP11.79□□□□□ -0.52
PDLIM5-210ENST00000508216 GOLM1Q8NBJ4 401 aa11.79□□□□□ -0.52
PDLIM5-210ENST00000508216 MAML1Q92585 1016 aa11.79□□□□□ -0.52
PDLIM5-210ENST00000508216 EFHD2Q96C19 240 aaPredicted RBP11.79□□□□□ -0.52
PDLIM5-210ENST00000508216 GBP5Q96PP8 586 aa11.79□□□□□ -0.52
PDLIM5-210ENST00000508216 NAPGQ99747 312 aaPredicted RBP11.79□□□□□ -0.52
PDLIM5-210ENST00000508216 IFNKQ9P0W0 207 aa11.79□□□□□ -0.52
PDLIM5-210ENST00000508216 DLGAP2Q9P1A6 1054 aa11.79□□□□□ -0.52
PDLIM5-210ENST00000508216 CRNNQ9UBG3 495 aaPredicted RBP11.79□□□□□ -0.52
PDLIM5-210ENST00000508216 CHMP2BQ9UQN3 213 aa11.79□□□□□ -0.52
PDLIM5-210ENST00000508216 PTCH1Q13635 1447 aa11.79□□□□□ -0.52
PDLIM5-210ENST00000508216 PTPRTO14522 1441 aa11.78□□□□□ -0.52
PDLIM5-210ENST00000508216 PRAG1Q86YV5 1406 aa11.78□□□□□ -0.52
PDLIM5-210ENST00000508216 ARID3CA6NKF2 412 aa11.78□□□□□ -0.52
PDLIM5-210ENST00000508216 KIF28PB7ZC32 967 aa11.78□□□□□ -0.52
PDLIM5-210ENST00000508216 ASMTLO95671 621 aa11.78□□□□□ -0.52
PDLIM5-210ENST00000508216 IFIT2P09913 472 aaKnown RBP11.78□□□□□ -0.52
PDLIM5-210ENST00000508216 HOXB1P14653 301 aaPredicted RBP11.78□□□□□ -0.52
PDLIM5-210ENST00000508216 GBP1P32455 592 aa11.78□□□□□ -0.52
PDLIM5-210ENST00000508216 PCK1P35558 622 aa11.78□□□□□ -0.52
PDLIM5-210ENST00000508216 SARSP49591 514 aaKnown RBP11.78□□□□□ -0.52
PDLIM5-210ENST00000508216 KIF11P52732 1056 aa11.78□□□□□ -0.52
PDLIM5-210ENST00000508216 ADARP55265 1226 aaKnown RBP11.78□□□□□ -0.52
PDLIM5-210ENST00000508216 KPNB1Q14974 876 aaKnown RBP11.78□□□□□ -0.52
PDLIM5-210ENST00000508216 TWF2Q6IBS0 349 aaKnown RBP11.78□□□□□ -0.52
PDLIM5-210ENST00000508216 PASD1Q8IV76 773 aa11.78□□□□□ -0.52
PDLIM5-210ENST00000508216 MREGQ8N565 214 aa11.78□□□□□ -0.52
PDLIM5-210ENST00000508216 FBF1Q8TES7 1133 aa11.78□□□□□ -0.52
PDLIM5-210ENST00000508216 ZSCAN31Q96LW9 406 aaPredicted RBP11.78□□□□□ -0.52
PDLIM5-210ENST00000508216 CDC5LQ99459 802 aaKnown RBP11.78□□□□□ -0.52
PDLIM5-210ENST00000508216 SLF1Q9BQI6 1058 aa11.78□□□□□ -0.52
PDLIM5-210ENST00000508216 SH2B1Q9NRF2 756 aaPredicted RBP11.78□□□□□ -0.52
PDLIM5-210ENST00000508216 PPP1R9AQ9ULJ8 1098 aa11.78□□□□□ -0.52
PDLIM5-210ENST00000508216 TTF2Q9UNY4 1162 aaKnown RBP11.78□□□□□ -0.52
PDLIM5-210ENST00000508216 CROCC2H7BZ55 1655 aa11.78□□□□□ -0.52
PDLIM5-210ENST00000508216 NUP155O75694 1391 aa11.78□□□□□ -0.52
PDLIM5-210ENST00000508216 LRRIQ1Q96JM4 1722 aa11.78□□□□□ -0.52
PDLIM5-210ENST00000508216 A0A088AWK7 358 aa11.77□□□□□ -0.52
PDLIM5-210ENST00000508216 ASAP2O43150 1006 aa11.77□□□□□ -0.52
PDLIM5-210ENST00000508216 HIP1RO75146 1068 aa11.77□□□□□ -0.52
PDLIM5-210ENST00000508216 NR1I2O75469 434 aa11.77□□□□□ -0.52
PDLIM5-210ENST00000508216 CYP1A2P05177 515 aa11.77□□□□□ -0.52
PDLIM5-210ENST00000508216 LACTBP83111 547 aaPredicted RBP11.77□□□□□ -0.52
PDLIM5-210ENST00000508216 ATP11AP98196 1134 aa11.77□□□□□ -0.52
PDLIM5-210ENST00000508216 CKAP4Q07065 602 aaKnown RBP11.77□□□□□ -0.52
PDLIM5-210ENST00000508216 NDUFAF5Q5TEU4 345 aa11.77□□□□□ -0.52
PDLIM5-210ENST00000508216 MAP7D3Q8IWC1 876 aa11.77□□□□□ -0.52
PDLIM5-210ENST00000508216 FAM20CQ8IXL6 584 aa11.77□□□□□ -0.52
PDLIM5-210ENST00000508216 SLC16A10Q8TF71 515 aa11.77□□□□□ -0.52
PDLIM5-210ENST00000508216 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP11.77□□□□□ -0.528e-7■■■■■ 60.7
PDLIM5-210ENST00000508216 RRP36Q96EU6 259 aaKnown RBP11.77□□□□□ -0.52
PDLIM5-210ENST00000508216 MED30Q96HR3 178 aa11.77□□□□□ -0.52
PDLIM5-210ENST00000508216 PTTG2Q9NZH5 202 aa11.77□□□□□ -0.52
PDLIM5-210ENST00000508216 LIMCH1Q9UPQ0 1083 aa11.77□□□□□ -0.52
PDLIM5-210ENST00000508216 SPTLC2O15270 562 aa11.77□□□□□ -0.53
PDLIM5-210ENST00000508216 HSF2BPO75031 334 aa11.77□□□□□ -0.53
PDLIM5-210ENST00000508216 CASP14P31944 242 aa11.77□□□□□ -0.53
PDLIM5-210ENST00000508216 SLC16A2P36021 539 aa11.77□□□□□ -0.53
PDLIM5-210ENST00000508216 EPHB4P54760 987 aa11.77□□□□□ -0.53
PDLIM5-210ENST00000508216 KIF22Q14807 665 aa11.77□□□□□ -0.53
PDLIM5-210ENST00000508216 ARHGEF18Q6ZSZ5 1173 aa11.77□□□□□ -0.53
PDLIM5-210ENST00000508216 CROCCP3Q8IVE0 287 aa11.77□□□□□ -0.53
PDLIM5-210ENST00000508216 CCDC83Q8IWF9 413 aa11.77□□□□□ -0.53
PDLIM5-210ENST00000508216 AOPEPQ8N6M6 819 aa11.77□□□□□ -0.53
PDLIM5-210ENST00000508216 FNDC8Q8TC99 324 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms