RNA–Protein interactions for RNA: ENST00000507944.5

CLDND1-216, Transcript of claudin domain containing 1, humanhuman

TSL 4

Gene CLDND1, Length 903 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-216ENST00000507944 SLC28A3Q9HAS3 691 aa24.06■■□□□ 1.44
CLDND1-216ENST00000507944 ANO2Q9NQ90 1003 aa24.06■■□□□ 1.44
CLDND1-216ENST00000507944 HDAC6Q9UBN7 1215 aa24.06■■□□□ 1.44
CLDND1-216ENST00000507944 GTF2IRD1Q9UHL9 959 aa24.06■■□□□ 1.44
CLDND1-216ENST00000507944 UNC80Q8N2C7 3258 aa24.06■■□□□ 1.44
CLDND1-216ENST00000507944 HAS3O00219 553 aa24.05■■□□□ 1.44
CLDND1-216ENST00000507944 F2P00734 622 aa24.05■■□□□ 1.44
CLDND1-216ENST00000507944 HOXD8P13378 290 aaPredicted RBP24.05■■□□□ 1.44
CLDND1-216ENST00000507944 ATP2A2P16615 1042 aaKnown RBP24.05■■□□□ 1.44
CLDND1-216ENST00000507944 MFSD10Q14728 455 aa24.05■■□□□ 1.44
CLDND1-216ENST00000507944 KIAA0753Q2KHM9 967 aa24.05■■□□□ 1.44
CLDND1-216ENST00000507944 HSDL1Q3SXM5 330 aa24.05■■□□□ 1.44
CLDND1-216ENST00000507944 BMP2KLQ5H9B9 411 aa24.05■■□□□ 1.44
CLDND1-216ENST00000507944 GPKOWQ92917 476 aaPredicted RBP eCLIP24.05■■□□□ 1.44
CLDND1-216ENST00000507944 GAS2L1Q99501 681 aaPredicted RBP24.05■■□□□ 1.44
CLDND1-216ENST00000507944 SEC63Q9UGP8 760 aaKnown RBP24.05■■□□□ 1.44
CLDND1-216ENST00000507944 UBA1P22314 1058 aaKnown RBP24.04■■□□□ 1.44
CLDND1-216ENST00000507944 LIFRP42702 1097 aa24.04■■□□□ 1.44
CLDND1-216ENST00000507944 CENPQQ7L2Z9 268 aaPredicted RBP24.04■■□□□ 1.44
CLDND1-216ENST00000507944 SKAP1Q86WV1 359 aa24.04■■□□□ 1.44
CLDND1-216ENST00000507944 SRBD1Q8N5C6 995 aaKnown RBP24.04■■□□□ 1.44
CLDND1-216ENST00000507944 AFAP1L1Q8TED9 768 aa24.04■■□□□ 1.44
CLDND1-216ENST00000507944 MLXIPQ9HAP2 919 aa24.04■■□□□ 1.44
CLDND1-216ENST00000507944 PCDHA11Q9Y5I1 949 aa24.04■■□□□ 1.44
CLDND1-216ENST00000507944 TANC1Q9C0D5 1861 aa24.03■■□□□ 1.44
CLDND1-216ENST00000507944 PLEKHA8P1O95397 391 aa24.03■■□□□ 1.44
CLDND1-216ENST00000507944 CALM1P0DP23 149 aa24.03■■□□□ 1.44
CLDND1-216ENST00000507944 CALM2P0DP24 149 aa24.03■■□□□ 1.44
CLDND1-216ENST00000507944 CALM3P0DP25 149 aa24.03■■□□□ 1.44
CLDND1-216ENST00000507944 MRPS9P82933 396 aaKnown RBP24.03■■□□□ 1.44
CLDND1-216ENST00000507944 GNPTABQ3T906 1256 aa24.03■■□□□ 1.44
CLDND1-216ENST00000507944 SMARCC2Q8TAQ2 1214 aa24.03■■□□□ 1.44
CLDND1-216ENST00000507944 DHX38Q92620 1227 aaKnown RBP24.03■■□□□ 1.44
CLDND1-216ENST00000507944 CUL5Q93034 780 aa24.03■■□□□ 1.44
CLDND1-216ENST00000507944 FRMPD4Q14CM0 1322 aa24.03■■□□□ 1.44
CLDND1-216ENST00000507944 EYSQ5T1H1 3165 aa24.02■■□□□ 1.44
CLDND1-216ENST00000507944 STAM2O75886 525 aa24.02■■□□□ 1.44
CLDND1-216ENST00000507944 MYOGP15173 224 aa24.02■■□□□ 1.44
CLDND1-216ENST00000507944 SELPP16109 830 aa24.02■■□□□ 1.44
CLDND1-216ENST00000507944 RXRAP19793 462 aa24.02■■□□□ 1.44
CLDND1-216ENST00000507944 USP17L6PQ6QN14 398 aa24.02■■□□□ 1.44
CLDND1-216ENST00000507944 CMTR1Q8N1G2 835 aaKnown RBP24.02■■□□□ 1.44
CLDND1-216ENST00000507944 COL25A1Q9BXS0 654 aaPredicted RBP24.02■■□□□ 1.44
CLDND1-216ENST00000507944 LRRC2Q9BYS8 371 aa24.02■■□□□ 1.44
CLDND1-216ENST00000507944 RTEL1Q9NZ71 1219 aa24.02■■□□□ 1.44
CLDND1-216ENST00000507944 SLC12A7Q9Y666 1083 aa24.02■■□□□ 1.44
CLDND1-216ENST00000507944 ICAM3P32942 547 aa24.01■■□□□ 1.43
CLDND1-216ENST00000507944 RBL2Q08999 1139 aa24.01■■□□□ 1.43
CLDND1-216ENST00000507944 INPP4AQ96PE3 977 aaPredicted RBP24.01■■□□□ 1.43
CLDND1-216ENST00000507944 BCAS3Q9H6U6 928 aa24.01■■□□□ 1.43
CLDND1-216ENST00000507944 PRUNE2Q8WUY3 3088 aa24.01■■□□□ 1.43
CLDND1-216ENST00000507944 SPATA31C2B4DYI2 1134 aa24■■□□□ 1.43
CLDND1-216ENST00000507944 PIK3CDO00329 1044 aa24■■□□□ 1.43
CLDND1-216ENST00000507944 MEIS2O14770 477 aa24■■□□□ 1.43
CLDND1-216ENST00000507944 ZNF200P98182 395 aaPredicted RBP24■■□□□ 1.43
CLDND1-216ENST00000507944 PTK7Q13308 1070 aa24■■□□□ 1.43
CLDND1-216ENST00000507944 GPNMBQ14956 572 aa24■■□□□ 1.43
CLDND1-216ENST00000507944 RNF20Q5VTR2 975 aa24■■□□□ 1.43
CLDND1-216ENST00000507944 PPP2R2DQ66LE6 453 aa24■■□□□ 1.43
CLDND1-216ENST00000507944 LRRC8DQ7L1W4 858 aa24■■□□□ 1.43
CLDND1-216ENST00000507944 RAB11FIP4Q86YS3 637 aa24■■□□□ 1.43
CLDND1-216ENST00000507944 USP38Q8NB14 1042 aa24■■□□□ 1.43
CLDND1-216ENST00000507944 PHOSPHO2Q8TCD6 241 aa24■■□□□ 1.43
CLDND1-216ENST00000507944 SLC9A7Q96T83 725 aa24■■□□□ 1.43
CLDND1-216ENST00000507944 C16orf70Q9BSU1 422 aa24■■□□□ 1.43
CLDND1-216ENST00000507944 PARNO95453 639 aaKnown RBP23.99■■□□□ 1.43
CLDND1-216ENST00000507944 CKBP12277 381 aa23.99■■□□□ 1.43
CLDND1-216ENST00000507944 ADGRE1Q14246 886 aa23.99■■□□□ 1.43
CLDND1-216ENST00000507944 NEDD9Q14511 834 aa23.99■■□□□ 1.43
CLDND1-216ENST00000507944 FANCBQ8NB91 859 aa23.99■■□□□ 1.43
CLDND1-216ENST00000507944 FIBPO43427 364 aa23.98■■□□□ 1.43
CLDND1-216ENST00000507944 BAIAP3O94812 1187 aa23.98■■□□□ 1.43
CLDND1-216ENST00000507944 SEMA3FQ13275 785 aa23.98■■□□□ 1.43
CLDND1-216ENST00000507944 PCNX4Q63HM2 1172 aa23.98■■□□□ 1.43
CLDND1-216ENST00000507944 XRRA1Q6P2D8 792 aa23.98■■□□□ 1.43
CLDND1-216ENST00000507944 SGMS1Q86VZ5 419 aa23.98■■□□□ 1.43
CLDND1-216ENST00000507944 CCDC82Q8N4S0 544 aa23.98■■□□□ 1.43
CLDND1-216ENST00000507944 PPM1EQ8WY54 764 aa23.98■■□□□ 1.43
CLDND1-216ENST00000507944 PSTPIP2Q9H939 334 aa23.98■■□□□ 1.43
CLDND1-216ENST00000507944 hCG_1642624A0A1W2PR95 340 aa23.97■■□□□ 1.43
CLDND1-216ENST00000507944 H3BRB1 525 aa23.97■■□□□ 1.43
CLDND1-216ENST00000507944 NOP56O00567 594 aaKnown RBP23.97■■□□□ 1.43
CLDND1-216ENST00000507944 IGFBP4P22692 258 aa23.97■■□□□ 1.43
CLDND1-216ENST00000507944 HIC1Q14526 733 aa23.97■■□□□ 1.43
CLDND1-216ENST00000507944 TRIM71Q2Q1W2 868 aaKnown RBP23.97■■□□□ 1.43
CLDND1-216ENST00000507944 METTL7BQ6UX53 244 aa23.97■■□□□ 1.43
CLDND1-216ENST00000507944 SYNE3Q6ZMZ3 975 aa23.97■■□□□ 1.43
CLDND1-216ENST00000507944 TMTC3Q6ZXV5 915 aa23.97■■□□□ 1.43
CLDND1-216ENST00000507944 CYFIP1Q7L576 1253 aa23.97■■□□□ 1.43
CLDND1-216ENST00000507944 NEK1Q96PY6 1258 aa23.97■■□□□ 1.43
CLDND1-216ENST00000507944 TUT1Q9H6E5 874 aaKnown RBP23.97■■□□□ 1.43
CLDND1-216ENST00000507944 DOCK5Q9H7D0 1870 aa23.97■■□□□ 1.43
CLDND1-216ENST00000507944 NBNO60934 754 aa23.96■■□□□ 1.43
CLDND1-216ENST00000507944 CXCL10P02778 98 aa23.96■■□□□ 1.43
CLDND1-216ENST00000507944 LGALS2P05162 132 aa23.96■■□□□ 1.43
CLDND1-216ENST00000507944 NLRX1Q86UT6 975 aa23.96■■□□□ 1.43
CLDND1-216ENST00000507944 MICU3Q86XE3 530 aa23.96■■□□□ 1.43
CLDND1-216ENST00000507944 HERC6Q8IVU3 1022 aa23.96■■□□□ 1.43
CLDND1-216ENST00000507944 WNT8BQ93098 351 aa23.96■■□□□ 1.43
CLDND1-216ENST00000507944 USP26Q9BXU7 913 aa23.96■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms