RNA–Protein interactions for RNA: ENST00000507142.5

NEK1-203, Transcript of NIMA related kinase 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene NEK1, Length 5,556 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1-203ENST00000507142 ADALQ6DHV7 355 aa10.44□□□□□ -0.74
NEK1-203ENST00000507142 CCDC94Q9BW85 323 aaPredicted RBP10.44□□□□□ -0.74
NEK1-203ENST00000507142 GCOM2Q9BZD3 368 aaPredicted RBP10.44□□□□□ -0.74
NEK1-203ENST00000507142 ATP6V0A4Q9HBG4 840 aa10.44□□□□□ -0.74
NEK1-203ENST00000507142 SERTAD1Q9UHV2 236 aa10.44□□□□□ -0.74
NEK1-203ENST00000507142 PARP4Q9UKK3 1724 aaKnown RBP10.44□□□□□ -0.74
NEK1-203ENST00000507142 IPO5O00410 1097 aaKnown RBP10.44□□□□□ -0.74
NEK1-203ENST00000507142 SFNP31947 248 aa10.44□□□□□ -0.74
NEK1-203ENST00000507142 KRT9P35527 623 aa10.44□□□□□ -0.74
NEK1-203ENST00000507142 STAT5BP51692 787 aa10.44□□□□□ -0.74
NEK1-203ENST00000507142 KARSQ15046 597 aaKnown RBP10.44□□□□□ -0.74
NEK1-203ENST00000507142 SLC17A8Q8NDX2 589 aa10.44□□□□□ -0.74
NEK1-203ENST00000507142 NOC4LQ9BVI4 516 aaKnown RBP10.44□□□□□ -0.74
NEK1-203ENST00000507142 POLR3EQ9NVU0 708 aa10.44□□□□□ -0.74
NEK1-203ENST00000507142 TMX2Q9Y320 296 aa10.44□□□□□ -0.74
NEK1-203ENST00000507142 AMIGO3Q86WK7 504 aa10.43□□□□□ -0.74
NEK1-203ENST00000507142 MTA3Q9BTC8 594 aa10.43□□□□□ -0.74
NEK1-203ENST00000507142 AGTPBP1Q9UPW5 1226 aa10.43□□□□□ -0.74
NEK1-203ENST00000507142 UBASH3AP57075 661 aa10.43□□□□□ -0.74
NEK1-203ENST00000507142 YWHAEP62258 255 aaKnown RBP10.43□□□□□ -0.74
NEK1-203ENST00000507142 POSTNQ15063 836 aa10.43□□□□□ -0.74
NEK1-203ENST00000507142 AOPEPQ8N6M6 819 aa10.43□□□□□ -0.74
NEK1-203ENST00000507142 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.43□□□□□ -0.74
NEK1-203ENST00000507142 PPP1R9AQ9ULJ8 1098 aa10.43□□□□□ -0.74
NEK1-203ENST00000507142 GOLGA5Q8TBA6 731 aa10.43□□□□□ -0.74
NEK1-203ENST00000507142 JAKMIP2Q96AA8 810 aa10.43□□□□□ -0.74
NEK1-203ENST00000507142 KIAA1683Q9H0B3 1180 aa10.43□□□□□ -0.74
NEK1-203ENST00000507142 K7ERI5 159 aa10.43□□□□□ -0.74
NEK1-203ENST00000507142 ANO6Q4KMQ2 910 aa10.43□□□□□ -0.74
NEK1-203ENST00000507142 ADGRA1Q86SQ6 560 aa10.43□□□□□ -0.74
NEK1-203ENST00000507142 MYOCDQ8IZQ8 938 aa10.43□□□□□ -0.74
NEK1-203ENST00000507142 PSPC1Q8WXF1 523 aaKnown RBP10.43□□□□□ -0.74
NEK1-203ENST00000507142 RUFY1Q96T51 708 aa10.43□□□□□ -0.74
NEK1-203ENST00000507142 BARHL2Q9NY43 387 aa10.43□□□□□ -0.74
NEK1-203ENST00000507142 UTP18Q9Y5J1 556 aaKnown RBP eCLIP10.43□□□□□ -0.74
NEK1-203ENST00000507142 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP10.43□□□□□ -0.742e-6■■□□□ 11.7
NEK1-203ENST00000507142 PDS5AQ29RF7 1337 aaKnown RBP10.42□□□□□ -0.74
NEK1-203ENST00000507142 LRMPQ12912 555 aa10.42□□□□□ -0.74
NEK1-203ENST00000507142 PRPF4BQ13523 1007 aaKnown RBP10.42□□□□□ -0.74
NEK1-203ENST00000507142 LARP4BQ92615 738 aaKnown RBP10.42□□□□□ -0.74
NEK1-203ENST00000507142 SYMPKQ92797 1274 aaKnown RBP10.42□□□□□ -0.74
NEK1-203ENST00000507142 RIOK1Q9BRS2 568 aaKnown RBP10.42□□□□□ -0.74
NEK1-203ENST00000507142 SMARCAD1Q9H4L7 1026 aa10.42□□□□□ -0.74
NEK1-203ENST00000507142 ZNF202O95125 648 aa10.42□□□□□ -0.74
NEK1-203ENST00000507142 DSG3P32926 999 aa10.42□□□□□ -0.74
NEK1-203ENST00000507142 ERVK-9P63128 1117 aa10.42□□□□□ -0.74
NEK1-203ENST00000507142 ERVK-24P63145 666 aa10.42□□□□□ -0.74
NEK1-203ENST00000507142 LONRF3Q496Y0 759 aa10.42□□□□□ -0.74
NEK1-203ENST00000507142 PIGOQ8TEQ8 1089 aa10.42□□□□□ -0.74
NEK1-203ENST00000507142 LEO1Q8WVC0 666 aaPredicted RBP10.42□□□□□ -0.74
NEK1-203ENST00000507142 SEPT1Q8WYJ6 367 aa10.42□□□□□ -0.74
NEK1-203ENST00000507142 ANKRD36BP1Q96IX9 119 aa10.42□□□□□ -0.74
NEK1-203ENST00000507142 RIC8AQ9NPQ8 531 aa10.42□□□□□ -0.74
NEK1-203ENST00000507142 MON2Q7Z3U7 1717 aa10.42□□□□□ -0.74
NEK1-203ENST00000507142 ARHGEF37A1IGU5 675 aa10.42□□□□□ -0.74
NEK1-203ENST00000507142 ICAM1P05362 532 aa10.42□□□□□ -0.74
NEK1-203ENST00000507142 RPS6P62753 249 aaKnown RBP10.42□□□□□ -0.74
NEK1-203ENST00000507142 CEP57Q86XR8 500 aa10.42□□□□□ -0.74
NEK1-203ENST00000507142 CLIC6Q96NY7 704 aa10.42□□□□□ -0.74
NEK1-203ENST00000507142 DNAJC25Q9H1X3 360 aa10.42□□□□□ -0.74
NEK1-203ENST00000507142 FAM198AQ9UFP1 575 aa10.42□□□□□ -0.74
NEK1-203ENST00000507142 PQBP1O60828 265 aaKnown RBP10.42□□□□□ -0.74
NEK1-203ENST00000507142 RAG1P15918 1043 aa10.42□□□□□ -0.74
NEK1-203ENST00000507142 TNNC1P63316 161 aa10.42□□□□□ -0.74
NEK1-203ENST00000507142 GRIK5Q16478 980 aa10.42□□□□□ -0.74
NEK1-203ENST00000507142 DSTYKQ6XUX3 929 aa10.42□□□□□ -0.74
NEK1-203ENST00000507142 CCDC97Q96F63 343 aaPredicted RBP10.42□□□□□ -0.74
NEK1-203ENST00000507142 SLITRK6Q9H5Y7 841 aa10.42□□□□□ -0.74
NEK1-203ENST00000507142 PIDD1Q9HB75 910 aa10.42□□□□□ -0.74
NEK1-203ENST00000507142 FRMD4AQ9P2Q2 1039 aaPredicted RBP10.42□□□□□ -0.74
NEK1-203ENST00000507142 LTN1O94822 1766 aa10.42□□□□□ -0.74
NEK1-203ENST00000507142 TMEM110-MUSTN1A8MSY1 372 aa10.42□□□□□ -0.74
NEK1-203ENST00000507142 STRNO43815 780 aa10.42□□□□□ -0.74
NEK1-203ENST00000507142 LAMC2Q13753 1193 aa10.42□□□□□ -0.74
NEK1-203ENST00000507142 SKIDA1Q1XH10 827 aa10.42□□□□□ -0.74
NEK1-203ENST00000507142 TAAR1Q96RJ0 339 aa10.42□□□□□ -0.74
NEK1-203ENST00000507142 MTRQ99707 1265 aa10.42□□□□□ -0.74
NEK1-203ENST00000507142 PCDHA10Q9Y5I2 948 aa10.42□□□□□ -0.74
NEK1-203ENST00000507142 ADORA2AP29274 412 aa10.41□□□□□ -0.74
NEK1-203ENST00000507142 PAK1Q13153 545 aa10.41□□□□□ -0.74
NEK1-203ENST00000507142 CEP55Q53EZ4 464 aa10.41□□□□□ -0.74
NEK1-203ENST00000507142 FAM26FQ5R3K3 315 aa10.41□□□□□ -0.74
NEK1-203ENST00000507142 IER5Q5VY09 327 aa10.41□□□□□ -0.74
NEK1-203ENST00000507142 FBXO16Q8IX29 292 aaPredicted RBP10.41□□□□□ -0.74
NEK1-203ENST00000507142 GJA10Q969M2 543 aa10.41□□□□□ -0.74
NEK1-203ENST00000507142 AK8Q96MA6 479 aa10.41□□□□□ -0.74
NEK1-203ENST00000507142 ACCSQ96QU6 501 aa10.41□□□□□ -0.74
NEK1-203ENST00000507142 MRIQ9BWK5 157 aa10.41□□□□□ -0.74
NEK1-203ENST00000507142 LMAN1P49257 510 aa10.41□□□□□ -0.74
NEK1-203ENST00000507142 TFAMQ00059 246 aaKnown RBP10.41□□□□□ -0.74
NEK1-203ENST00000507142 FSTL1Q12841 308 aa10.41□□□□□ -0.74
NEK1-203ENST00000507142 CACTINQ8WUQ7 758 aaKnown RBP10.41□□□□□ -0.74
NEK1-203ENST00000507142 LRRC45Q96CN5 670 aa10.41□□□□□ -0.74
NEK1-203ENST00000507142 DYDC2Q96IM9 177 aa10.41□□□□□ -0.74
NEK1-203ENST00000507142 USP28Q96RU2 1077 aa10.41□□□□□ -0.74
NEK1-203ENST00000507142 SPZ1Q9BXG8 430 aa10.41□□□□□ -0.74
NEK1-203ENST00000507142 GCNAQ96QF7 691 aa10.41□□□□□ -0.74
NEK1-203ENST00000507142 ACTN2P35609 894 aa10.41□□□□□ -0.74
NEK1-203ENST00000507142 QARSP47897 775 aaKnown RBP10.41□□□□□ -0.74
NEK1-203ENST00000507142 THNSL1Q8IYQ7 743 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms