RNA–Protein interactions for RNA: ENST00000507012.1

RERE-217, Transcript of arginine-glutamic acid dipeptide repeats, humanhuman

TSL 5

Gene RERE, Length 418 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RERE-217ENST00000507012 RIC8AQ9NPQ8 531 aa12.59□□□□□ -0.39
RERE-217ENST00000507012 FAM217BQ9NTX9 383 aaPredicted RBP12.59□□□□□ -0.39
RERE-217ENST00000507012 GRIN2DO15399 1336 aa12.59□□□□□ -0.39
RERE-217ENST00000507012 hCG_1642624A0A1W2PR95 340 aa12.58□□□□□ -0.4
RERE-217ENST00000507012 ESYT2A0FGR8 921 aa12.58□□□□□ -0.4
RERE-217ENST00000507012 SPATA31C2B4DYI2 1134 aa12.58□□□□□ -0.4
RERE-217ENST00000507012 PRPF3O43395 683 aaKnown RBP12.58□□□□□ -0.4
RERE-217ENST00000507012 GGPS1O95749 300 aa12.58□□□□□ -0.4
RERE-217ENST00000507012 SCG2P13521 617 aa12.58□□□□□ -0.4
RERE-217ENST00000507012 CPA1P15085 419 aa12.58□□□□□ -0.4
RERE-217ENST00000507012 UBA1P22314 1058 aaKnown RBP12.58□□□□□ -0.4
RERE-217ENST00000507012 PTGS1P23219 599 aa12.58□□□□□ -0.4
RERE-217ENST00000507012 CDC27P30260 824 aa12.58□□□□□ -0.4
RERE-217ENST00000507012 PSMC6P62333 389 aa12.58□□□□□ -0.4
RERE-217ENST00000507012 MRPS9P82933 396 aaKnown RBP12.58□□□□□ -0.4
RERE-217ENST00000507012 PFKFB3Q16875 520 aaPredicted RBP12.58□□□□□ -0.4
RERE-217ENST00000507012 NBPF20Q3BBV1 942 aa12.58□□□□□ -0.4
RERE-217ENST00000507012 CPLX2Q6PUV4 134 aaKnown RBP12.58□□□□□ -0.4
RERE-217ENST00000507012 METTL7BQ6UX53 244 aa12.58□□□□□ -0.4
RERE-217ENST00000507012 SESTD1Q86VW0 696 aa12.58□□□□□ -0.4
RERE-217ENST00000507012 FAM177A1Q8N128 213 aaPredicted RBP12.58□□□□□ -0.4
RERE-217ENST00000507012 GPKOWQ92917 476 aaPredicted RBP eCLIP12.58□□□□□ -0.4
RERE-217ENST00000507012 ZNF274Q96GC6 653 aaPredicted RBP12.58□□□□□ -0.4
RERE-217ENST00000507012 RNF26Q9BY78 433 aaPredicted RBP12.58□□□□□ -0.4
RERE-217ENST00000507012 HIPK3Q9H422 1215 aa12.58□□□□□ -0.4
RERE-217ENST00000507012 STXBP3O00186 592 aa12.57□□□□□ -0.4
RERE-217ENST00000507012 NOP56O00567 594 aaKnown RBP12.57□□□□□ -0.4
RERE-217ENST00000507012 B4GALT4O60513 344 aa12.57□□□□□ -0.4
RERE-217ENST00000507012 F2P00734 622 aa12.57□□□□□ -0.4
RERE-217ENST00000507012 IFNAR1P17181 557 aa12.57□□□□□ -0.4
RERE-217ENST00000507012 GNA11P29992 359 aa12.57□□□□□ -0.4
RERE-217ENST00000507012 PDIA3P30101 505 aaKnown RBP12.57□□□□□ -0.4
RERE-217ENST00000507012 ADD1P35611 737 aaKnown RBP12.57□□□□□ -0.4
RERE-217ENST00000507012 FAM47CQ5HY64 1035 aa12.57□□□□□ -0.4
RERE-217ENST00000507012 PSRC1Q6PGN9 363 aaPredicted RBP12.57□□□□□ -0.4
RERE-217ENST00000507012 TRIM22Q8IYM9 498 aa12.57□□□□□ -0.4
RERE-217ENST00000507012 CCDC155Q8N6L0 562 aa12.57□□□□□ -0.4
RERE-217ENST00000507012 CCDC148Q8NFR7 591 aa12.57□□□□□ -0.4
RERE-217ENST00000507012 BICD2Q8TD16 824 aa12.57□□□□□ -0.4
RERE-217ENST00000507012 NOC4LQ9BVI4 516 aaKnown RBP12.57□□□□□ -0.4
RERE-217ENST00000507012 MTIF3Q9H2K0 278 aaKnown RBP12.57□□□□□ -0.4
RERE-217ENST00000507012 PCDHA6Q9UN73 950 aa12.57□□□□□ -0.4
RERE-217ENST00000507012 NOD1Q9Y239 953 aa12.57□□□□□ -0.4
RERE-217ENST00000507012 PCDHA8Q9Y5H6 950 aa12.57□□□□□ -0.4
RERE-217ENST00000507012 SMCO2A6NFE2 343 aa12.56□□□□□ -0.4
RERE-217ENST00000507012 PITPNM1O00562 1244 aa12.56□□□□□ -0.4
RERE-217ENST00000507012 CPLX1O14810 134 aa12.56□□□□□ -0.4
RERE-217ENST00000507012 PFKMP08237 780 aa12.56□□□□□ -0.4
RERE-217ENST00000507012 ITGB8P26012 769 aa12.56□□□□□ -0.4
RERE-217ENST00000507012 BFSP2Q13515 415 aa12.56□□□□□ -0.4
RERE-217ENST00000507012 ANKRD1Q15327 319 aa12.56□□□□□ -0.4
RERE-217ENST00000507012 RPUSD2Q8IZ73 545 aaKnown RBP12.56□□□□□ -0.4
RERE-217ENST00000507012 C7orf31Q8N865 590 aa12.56□□□□□ -0.4
RERE-217ENST00000507012 PPP1R12CQ9BZL4 782 aa12.56□□□□□ -0.4
RERE-217ENST00000507012 ZMYND12Q9H0C1 365 aa12.56□□□□□ -0.4
RERE-217ENST00000507012 TRPV6Q9H1D0 765 aa12.56□□□□□ -0.4
RERE-217ENST00000507012 C6orf50Q9HD87 102 aa12.56□□□□□ -0.4
RERE-217ENST00000507012 SH3GLB2Q9NR46 395 aa12.56□□□□□ -0.4
RERE-217ENST00000507012 PDRG1Q9NUG6 133 aa12.56□□□□□ -0.4
RERE-217ENST00000507012 UBIAD1Q9Y5Z9 338 aa12.56□□□□□ -0.4
RERE-217ENST00000507012 CDKL5O76039 1030 aa12.55□□□□□ -0.4
RERE-217ENST00000507012 PARNO95453 639 aaKnown RBP12.55□□□□□ -0.4
RERE-217ENST00000507012 RFC2P35250 354 aa12.55□□□□□ -0.4
RERE-217ENST00000507012 PSEN2P49810 448 aa12.55□□□□□ -0.4
RERE-217ENST00000507012 SP2Q02086 613 aa12.55□□□□□ -0.4
RERE-217ENST00000507012 MTMR1Q13613 665 aa12.55□□□□□ -0.4
RERE-217ENST00000507012 TOB2Q14106 344 aaPredicted RBP12.55□□□□□ -0.4
RERE-217ENST00000507012 MFSD10Q14728 455 aa12.55□□□□□ -0.4
RERE-217ENST00000507012 SHHQ15465 462 aa12.55□□□□□ -0.4
RERE-217ENST00000507012 NTRK3Q16288 839 aa12.55□□□□□ -0.4
RERE-217ENST00000507012 UBE2SQ16763 222 aa12.55□□□□□ -0.4
RERE-217ENST00000507012 HSDL1Q3SXM5 330 aa12.55□□□□□ -0.4
RERE-217ENST00000507012 RETREG2Q8NC44 543 aa12.55□□□□□ -0.4
RERE-217ENST00000507012 CAGE1Q8TC20 777 aa12.55□□□□□ -0.4
RERE-217ENST00000507012 KAT2BQ92831 832 aa12.55□□□□□ -0.4
RERE-217ENST00000507012 IL17RAQ96F46 866 aa12.55□□□□□ -0.4
RERE-217ENST00000507012 RNPC3Q96LT9 517 aaKnown RBP12.55□□□□□ -0.4
RERE-217ENST00000507012 ANO3Q9BYT9 981 aa12.55□□□□□ -0.4
RERE-217ENST00000507012 IL23AQ9NPF7 189 aa12.55□□□□□ -0.4
RERE-217ENST00000507012 JADE2Q9NQC1 790 aa12.55□□□□□ -0.4
RERE-217ENST00000507012 TRMT13Q9NUP7 481 aaKnown RBP12.55□□□□□ -0.4
RERE-217ENST00000507012 RTEL1Q9NZ71 1219 aa12.55□□□□□ -0.4
RERE-217ENST00000507012 ZNF215Q9UL58 517 aaPredicted RBP12.55□□□□□ -0.4
RERE-217ENST00000507012 MYH7BA7E2Y1 1941 aa12.54□□□□□ -0.4
RERE-217ENST00000507012 HAS3O00219 553 aa12.54□□□□□ -0.4
RERE-217ENST00000507012 SREBF1P36956 1147 aa12.54□□□□□ -0.4
RERE-217ENST00000507012 SMAD3P84022 425 aaKnown RBP12.54□□□□□ -0.4
RERE-217ENST00000507012 SEMA3FQ13275 785 aa12.54□□□□□ -0.4
RERE-217ENST00000507012 PTGISQ16647 500 aa12.54□□□□□ -0.4
RERE-217ENST00000507012 KIAA0753Q2KHM9 967 aa12.54□□□□□ -0.4
RERE-217ENST00000507012 FAM109BQ6ICB4 259 aaPredicted RBP12.54□□□□□ -0.4
RERE-217ENST00000507012 TYW1BQ6NUM6 668 aa12.54□□□□□ -0.4
RERE-217ENST00000507012 CYFIP1Q7L576 1253 aa12.54□□□□□ -0.4
RERE-217ENST00000507012 NIPA1Q7RTP0 329 aa12.54□□□□□ -0.4
RERE-217ENST00000507012 REXO1Q8N1G1 1221 aaKnown RBP12.54□□□□□ -0.4
RERE-217ENST00000507012 UPF3BQ9BZI7 483 aaKnown RBP12.54□□□□□ -0.4
RERE-217ENST00000507012 PCDH10Q9P2E7 1040 aa12.54□□□□□ -0.4
RERE-217ENST00000507012 GTF2IRD1Q9UHL9 959 aa12.54□□□□□ -0.4
RERE-217ENST00000507012 H3BRB1 525 aa12.53□□□□□ -0.4
RERE-217ENST00000507012 SOX1O00570 391 aaPredicted RBP12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms