RNA–Protein interactions for RNA: ENST00000506516.5

GYPB-206, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 473 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-206ENST00000506516 CDKL5O76039 1030 aa8.35□□□□□ -1.07
GYPB-206ENST00000506516 IFNAR1P17181 557 aa8.35□□□□□ -1.07
GYPB-206ENST00000506516 EIF2AK2P19525 551 aaKnown RBP8.35□□□□□ -1.07
GYPB-206ENST00000506516 EDNRBP24530 442 aa8.35□□□□□ -1.07
GYPB-206ENST00000506516 HOXA13P31271 388 aaPredicted RBP8.35□□□□□ -1.07
GYPB-206ENST00000506516 RBM25P49756 843 aaKnown RBP8.35□□□□□ -1.07
GYPB-206ENST00000506516 NAPAP54920 295 aa8.35□□□□□ -1.07
GYPB-206ENST00000506516 SSRP1Q08945 709 aaKnown RBP8.35□□□□□ -1.07
GYPB-206ENST00000506516 FUT2Q10981 343 aa8.35□□□□□ -1.07
GYPB-206ENST00000506516 STK3Q13188 491 aa8.35□□□□□ -1.07
GYPB-206ENST00000506516 PFKFB3Q16875 520 aaPredicted RBP8.35□□□□□ -1.07
GYPB-206ENST00000506516 TAPT1Q6NXT6 567 aa8.35□□□□□ -1.07
GYPB-206ENST00000506516 FCHSD1Q86WN1 690 aa8.35□□□□□ -1.07
GYPB-206ENST00000506516 CCDC12Q8WUD4 166 aaPredicted RBP8.35□□□□□ -1.07
GYPB-206ENST00000506516 DPF3Q92784 378 aa8.35□□□□□ -1.07
GYPB-206ENST00000506516 PAWRQ96IZ0 340 aaKnown RBP8.35□□□□□ -1.07
GYPB-206ENST00000506516 SLC26A6Q9BXS9 759 aa8.35□□□□□ -1.07
GYPB-206ENST00000506516 RNF26Q9BY78 433 aaPredicted RBP8.35□□□□□ -1.07
GYPB-206ENST00000506516 KATNBL1Q9H079 304 aa8.35□□□□□ -1.07
GYPB-206ENST00000506516 AP5M1Q9H0R1 490 aa8.35□□□□□ -1.07
GYPB-206ENST00000506516 C11orf49Q9H6J7 331 aa8.35□□□□□ -1.07
GYPB-206ENST00000506516 TMEM134Q9H6X4 195 aa8.35□□□□□ -1.07
GYPB-206ENST00000506516 PXMP2Q9NR77 195 aa8.35□□□□□ -1.07
GYPB-206ENST00000506516 BARHL2Q9NY43 387 aa8.35□□□□□ -1.07
GYPB-206ENST00000506516 VPS9D1Q9Y2B5 631 aa8.35□□□□□ -1.07
GYPB-206ENST00000506516 Q9Y3F1 56 aa8.35□□□□□ -1.07
GYPB-206ENST00000506516 NID2Q14112 1375 aa8.35□□□□□ -1.07
GYPB-206ENST00000506516 RBM47A0AV96 593 aaKnown RBP8.34□□□□□ -1.07
GYPB-206ENST00000506516 SMCO2A6NFE2 343 aa8.34□□□□□ -1.07
GYPB-206ENST00000506516 SPDYE3A6NKU9 549 aa8.34□□□□□ -1.07
GYPB-206ENST00000506516 MEIS2O14770 477 aa8.34□□□□□ -1.07
GYPB-206ENST00000506516 NKRFO15226 690 aaKnown RBP eCLIP8.34□□□□□ -1.07
GYPB-206ENST00000506516 DYNC1LI2O43237 492 aaPredicted RBP8.34□□□□□ -1.07
GYPB-206ENST00000506516 PFKFB2O60825 505 aa8.34□□□□□ -1.07
GYPB-206ENST00000506516 STAM2O75886 525 aa8.34□□□□□ -1.07
GYPB-206ENST00000506516 PGK1P00558 417 aa8.34□□□□□ -1.07
GYPB-206ENST00000506516 NR3C2P08235 984 aa8.34□□□□□ -1.07
GYPB-206ENST00000506516 C6orf222P0C671 652 aaPredicted RBP8.34□□□□□ -1.07
GYPB-206ENST00000506516 MYCLP12524 364 aaPredicted RBP8.34□□□□□ -1.07
GYPB-206ENST00000506516 SCG2P13521 617 aa8.34□□□□□ -1.07
GYPB-206ENST00000506516 ADCYAP1R1P41586 468 aa8.34□□□□□ -1.07
GYPB-206ENST00000506516 AK2P54819 239 aa8.34□□□□□ -1.07
GYPB-206ENST00000506516 TTLL4Q14679 1199 aa8.34□□□□□ -1.07
GYPB-206ENST00000506516 LRRC41Q15345 812 aa8.34□□□□□ -1.07
GYPB-206ENST00000506516 NTRK3Q16288 839 aa8.34□□□□□ -1.07
GYPB-206ENST00000506516 GJC2Q5T442 439 aaPredicted RBP8.34□□□□□ -1.07
GYPB-206ENST00000506516 PPP1R18Q6NYC8 613 aa8.34□□□□□ -1.07
GYPB-206ENST00000506516 UBE2Q1Q7Z7E8 422 aa8.34□□□□□ -1.07
GYPB-206ENST00000506516 VSIG10LQ86VR7 867 aa8.34□□□□□ -1.07
GYPB-206ENST00000506516 FBXO16Q8IX29 292 aaPredicted RBP8.34□□□□□ -1.07
GYPB-206ENST00000506516 PCSK9Q8NBP7 692 aaKnown RBP8.34□□□□□ -1.07
GYPB-206ENST00000506516 SCFD2Q8WU76 684 aa8.34□□□□□ -1.07
GYPB-206ENST00000506516 GPKOWQ92917 476 aaPredicted RBP eCLIP8.34□□□□□ -1.07
GYPB-206ENST00000506516 PHKBQ93100 1093 aa8.34□□□□□ -1.07
GYPB-206ENST00000506516 PDCD2LQ9BRP1 358 aa8.34□□□□□ -1.07
GYPB-206ENST00000506516 TSEN34Q9BSV6 310 aaKnown RBP8.34□□□□□ -1.07
GYPB-206ENST00000506516 WDR11Q9BZH6 1224 aa8.34□□□□□ -1.07
GYPB-206ENST00000506516 EHMT1Q9H9B1 1298 aa8.34□□□□□ -1.07
GYPB-206ENST00000506516 NCOA5Q9HCD5 579 aaKnown RBP8.34□□□□□ -1.07
GYPB-206ENST00000506516 RIC8AQ9NPQ8 531 aa8.34□□□□□ -1.07
GYPB-206ENST00000506516 COL20A1Q9P218 1284 aa8.34□□□□□ -1.07
GYPB-206ENST00000506516 TPCN1Q9ULQ1 816 aa8.34□□□□□ -1.07
GYPB-206ENST00000506516 MOXD2PA6NHM9 499 aa8.33□□□□□ -1.08
GYPB-206ENST00000506516 STXBP3O00186 592 aa8.33□□□□□ -1.08
GYPB-206ENST00000506516 ZEB2O60315 1214 aa8.33□□□□□ -1.08
GYPB-206ENST00000506516 DEXIO95424 95 aa8.33□□□□□ -1.08
GYPB-206ENST00000506516 FOSP01100 380 aaPredicted RBP8.33□□□□□ -1.08
GYPB-206ENST00000506516 TXNP10599 105 aaKnown RBP8.33□□□□□ -1.08
GYPB-206ENST00000506516 SMPD1P17405 629 aa8.33□□□□□ -1.08
GYPB-206ENST00000506516 XBP1P17861 261 aa8.33□□□□□ -1.08
GYPB-206ENST00000506516 GNA11P29992 359 aa8.33□□□□□ -1.08
GYPB-206ENST00000506516 CCND2P30279 289 aa8.33□□□□□ -1.08
GYPB-206ENST00000506516 ADCY7P51828 1080 aa8.33□□□□□ -1.08
GYPB-206ENST00000506516 GJA9P57773 515 aa8.33□□□□□ -1.08
GYPB-206ENST00000506516 PGM5Q15124 567 aa8.33□□□□□ -1.08
GYPB-206ENST00000506516 GNPTABQ3T906 1256 aa8.33□□□□□ -1.08
GYPB-206ENST00000506516 DUSP28Q4G0W2 176 aa8.33□□□□□ -1.08
GYPB-206ENST00000506516 BRDTQ58F21 947 aaPredicted RBP8.33□□□□□ -1.08
GYPB-206ENST00000506516 GNASQ5JWF2 1037 aa8.33□□□□□ -1.08
GYPB-206ENST00000506516 WWC2Q6AWC2 1192 aa8.33□□□□□ -1.08
GYPB-206ENST00000506516 MCTP2Q6DN12 878 aa8.33□□□□□ -1.08
GYPB-206ENST00000506516 XRRA1Q6P2D8 792 aa8.33□□□□□ -1.08
GYPB-206ENST00000506516 KCNV1Q6PIU1 500 aa8.33□□□□□ -1.08
GYPB-206ENST00000506516 USP17L6PQ6QN14 398 aa8.33□□□□□ -1.08
GYPB-206ENST00000506516 SEPT14Q6ZU15 432 aa8.33□□□□□ -1.08
GYPB-206ENST00000506516 BICD2Q8TD16 824 aa8.33□□□□□ -1.08
GYPB-206ENST00000506516 ZSCAN31Q96LW9 406 aaPredicted RBP8.33□□□□□ -1.08
GYPB-206ENST00000506516 SENP6Q9GZR1 1112 aaPredicted RBP8.33□□□□□ -1.08
GYPB-206ENST00000506516 C6orf50Q9HD87 102 aa8.33□□□□□ -1.08
GYPB-206ENST00000506516 PDGFCQ9NRA1 345 aa8.33□□□□□ -1.08
GYPB-206ENST00000506516 SEPT9Q9UHD8 586 aaPredicted RBP8.33□□□□□ -1.08
GYPB-206ENST00000506516 LIMCH1Q9UPQ0 1083 aa8.33□□□□□ -1.08
GYPB-206ENST00000506516 DDX49Q9Y6V7 483 aaKnown RBP8.33□□□□□ -1.08
GYPB-206ENST00000506516 ZNFX1Q9P2E3 1918 aaKnown RBP8.33□□□□□ -1.08
GYPB-206ENST00000506516 SYNRGQ9UMZ2 1314 aa8.32□□□□□ -1.08
GYPB-206ENST00000506516 C11orf97A0A1B0GVM6 126 aaPredicted RBP8.32□□□□□ -1.08
GYPB-206ENST00000506516 ADAMTS4O75173 837 aa8.32□□□□□ -1.08
GYPB-206ENST00000506516 TGFB3P10600 412 aa8.32□□□□□ -1.08
GYPB-206ENST00000506516 COL6A1P12109 1028 aa8.32□□□□□ -1.08
GYPB-206ENST00000506516 ACLYP53396 1101 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms