RNA–Protein interactions for RNA: ENST00000506426.1

TRAPPC11-205, Transcript of trafficking protein particle complex 11, humanhuman

TSL 2

Gene TRAPPC11, Length 395 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-205ENST00000506426 HOOK2Q96ED9 719 aa4.27□□□□□ -1.73
TRAPPC11-205ENST00000506426 DBNDD2Q9BQY9 259 aa4.27□□□□□ -1.73
TRAPPC11-205ENST00000506426 KRTAP4-9Q9BYQ8 210 aa4.27□□□□□ -1.73
TRAPPC11-205ENST00000506426 EMC7Q9NPA0 242 aa4.27□□□□□ -1.73
TRAPPC11-205ENST00000506426 CRTAC1Q9NQ79 661 aa4.27□□□□□ -1.73
TRAPPC11-205ENST00000506426 CATSPERZQ9NTU4 200 aa4.27□□□□□ -1.73
TRAPPC11-205ENST00000506426 SPTLC3Q9NUV7 552 aa4.27□□□□□ -1.73
TRAPPC11-205ENST00000506426 ZIM2Q9NZV7 527 aa4.27□□□□□ -1.73
TRAPPC11-205ENST00000506426 GABBR1Q9UBS5 961 aa4.27□□□□□ -1.73
TRAPPC11-205ENST00000506426 SNX11Q9Y5W9 270 aa4.27□□□□□ -1.73
TRAPPC11-205ENST00000506426 TMEM265A0A087WTH1 108 aa4.26□□□□□ -1.73
TRAPPC11-205ENST00000506426 C7orf72A4D263 438 aa4.26□□□□□ -1.73
TRAPPC11-205ENST00000506426 K7ESF4 209 aa4.26□□□□□ -1.73
TRAPPC11-205ENST00000506426 GABRDO14764 452 aa4.26□□□□□ -1.73
TRAPPC11-205ENST00000506426 GSC2O15499 205 aa4.26□□□□□ -1.73
TRAPPC11-205ENST00000506426 PRKD3O94806 890 aa4.26□□□□□ -1.73
TRAPPC11-205ENST00000506426 TGFB1P01137 390 aa4.26□□□□□ -1.73
TRAPPC11-205ENST00000506426 ATP2A2P16615 1042 aaKnown RBP4.26□□□□□ -1.73
TRAPPC11-205ENST00000506426 BCL6P41182 706 aa4.26□□□□□ -1.73
TRAPPC11-205ENST00000506426 TBX4P57082 545 aa4.26□□□□□ -1.73
TRAPPC11-205ENST00000506426 SESN3P58005 492 aa4.26□□□□□ -1.73
TRAPPC11-205ENST00000506426 LACTBP83111 547 aaPredicted RBP4.26□□□□□ -1.73
TRAPPC11-205ENST00000506426 EGR3Q06889 387 aa4.26□□□□□ -1.73
TRAPPC11-205ENST00000506426 FZD5Q13467 585 aa4.26□□□□□ -1.73
TRAPPC11-205ENST00000506426 PIN1Q13526 163 aaPredicted RBP4.26□□□□□ -1.73
TRAPPC11-205ENST00000506426 LRRC41Q15345 812 aa4.26□□□□□ -1.73
TRAPPC11-205ENST00000506426 CPSF6Q16630 551 aaKnown RBP eCLIP4.26□□□□□ -1.73
TRAPPC11-205ENST00000506426 MBLAC2Q68D91 279 aa4.26□□□□□ -1.73
TRAPPC11-205ENST00000506426 HDGFL2Q7Z4V5 671 aaPredicted RBP4.26□□□□□ -1.73
TRAPPC11-205ENST00000506426 WAPLQ7Z5K2 1190 aa4.26□□□□□ -1.73
TRAPPC11-205ENST00000506426 CCDC146Q8IYE0 955 aa4.26□□□□□ -1.73
TRAPPC11-205ENST00000506426 MYO1HQ8N1T3 1032 aa4.26□□□□□ -1.73
TRAPPC11-205ENST00000506426 NETO1Q8TDF5 533 aa4.26□□□□□ -1.73
TRAPPC11-205ENST00000506426 SYTL4Q96C24 671 aaPredicted RBP4.26□□□□□ -1.73
TRAPPC11-205ENST00000506426 CAMKK2Q96RR4 588 aa4.26□□□□□ -1.73
TRAPPC11-205ENST00000506426 KCNJ15Q99712 375 aa4.26□□□□□ -1.73
TRAPPC11-205ENST00000506426 LRRC4CQ9HCJ2 640 aa4.26□□□□□ -1.73
TRAPPC11-205ENST00000506426 SEMA3GQ9NS98 782 aa4.26□□□□□ -1.73
TRAPPC11-205ENST00000506426 CLDND1Q9NY35 253 aa4.26□□□□□ -1.73
TRAPPC11-205ENST00000506426 ADGRE2Q9UHX3 823 aa4.26□□□□□ -1.73
TRAPPC11-205ENST00000506426 PLAGL2Q9UPG8 496 aa4.26□□□□□ -1.73
TRAPPC11-205ENST00000506426 RNF114Q9Y508 228 aa4.26□□□□□ -1.73
TRAPPC11-205ENST00000506426 PCDHA11Q9Y5I1 949 aa4.26□□□□□ -1.73
TRAPPC11-205ENST00000506426 ARID1BQ8NFD5 2236 aaPredicted RBP4.26□□□□□ -1.73
TRAPPC11-205ENST00000506426 TNKSO95271 1327 aa4.25□□□□□ -1.73
TRAPPC11-205ENST00000506426 SLC12A8A0AV02 714 aa4.25□□□□□ -1.73
TRAPPC11-205ENST00000506426 TMEM82A0PJX8 343 aa4.25□□□□□ -1.73
TRAPPC11-205ENST00000506426 WTIPA6NIX2 430 aaPredicted RBP4.25□□□□□ -1.73
TRAPPC11-205ENST00000506426 H7BY64 318 aa4.25□□□□□ -1.73
TRAPPC11-205ENST00000506426 H7C1D1 291 aa4.25□□□□□ -1.73
TRAPPC11-205ENST00000506426 CYP26A1O43174 497 aa4.25□□□□□ -1.73
TRAPPC11-205ENST00000506426 SCGB1D2O95969 90 aa4.25□□□□□ -1.73
TRAPPC11-205ENST00000506426 IGLV1-40P01703 118 aa4.25□□□□□ -1.73
TRAPPC11-205ENST00000506426 CCND1P24385 295 aa4.25□□□□□ -1.73
TRAPPC11-205ENST00000506426 GP2P55259 537 aaKnown RBP4.25□□□□□ -1.73
TRAPPC11-205ENST00000506426 TEKQ02763 1124 aa4.25□□□□□ -1.73
TRAPPC11-205ENST00000506426 SPIRE1Q08AE8 756 aa4.25□□□□□ -1.73
TRAPPC11-205ENST00000506426 IFI16Q16666 785 aaKnown RBP4.25□□□□□ -1.73
TRAPPC11-205ENST00000506426 PTPN21Q16825 1174 aa4.25□□□□□ -1.73
TRAPPC11-205ENST00000506426 ZPBP2Q6X784 338 aa4.25□□□□□ -1.73
TRAPPC11-205ENST00000506426 CEP68Q76N32 757 aa4.25□□□□□ -1.73
TRAPPC11-205ENST00000506426 OTOP1Q7RTM1 612 aa4.25□□□□□ -1.73
TRAPPC11-205ENST00000506426 CISD2Q8N5K1 135 aaKnown RBP4.25□□□□□ -1.73
TRAPPC11-205ENST00000506426 EFHBQ8N7U6 833 aa4.25□□□□□ -1.73
TRAPPC11-205ENST00000506426 SHKBP1Q8TBC3 707 aa4.25□□□□□ -1.73
TRAPPC11-205ENST00000506426 SLC5A5Q92911 643 aa4.25□□□□□ -1.73
TRAPPC11-205ENST00000506426 TMEM169Q96HH4 297 aa4.25□□□□□ -1.73
TRAPPC11-205ENST00000506426 AHCYL2Q96HN2 611 aaKnown RBP4.25□□□□□ -1.73
TRAPPC11-205ENST00000506426 FCRL2Q96LA5 508 aaPredicted RBP4.25□□□□□ -1.73
TRAPPC11-205ENST00000506426 JAM3Q9BX67 310 aa4.25□□□□□ -1.73
TRAPPC11-205ENST00000506426 CDH19Q9H159 772 aa4.25□□□□□ -1.73
TRAPPC11-205ENST00000506426 OXSMQ9NWU1 459 aa4.25□□□□□ -1.73
TRAPPC11-205ENST00000506426 PPARGC1AQ9UBK2 798 aaKnown RBP4.25□□□□□ -1.73
TRAPPC11-205ENST00000506426 ZNF180Q9UJW8 692 aa4.25□□□□□ -1.73
TRAPPC11-205ENST00000506426 CBLCQ9ULV8 474 aa4.25□□□□□ -1.73
TRAPPC11-205ENST00000506426 U3KQE9 123 aa4.25□□□□□ -1.73
TRAPPC11-205ENST00000506426 WASHC2AQ641Q2 1341 aa4.24□□□□□ -1.73
TRAPPC11-205ENST00000506426 PEG3Q9GZU2 1588 aa4.24□□□□□ -1.73
TRAPPC11-205ENST00000506426 GOLGA6CA6NDK9 693 aa4.24□□□□□ -1.73
TRAPPC11-205ENST00000506426 GOLGA6BA6NDN3 693 aa4.24□□□□□ -1.73
TRAPPC11-205ENST00000506426 CAND2O75155 1236 aa4.24□□□□□ -1.73
TRAPPC11-205ENST00000506426 RFPL1O75677 317 aa4.24□□□□□ -1.73
TRAPPC11-205ENST00000506426 ESR1P03372 595 aa4.24□□□□□ -1.73
TRAPPC11-205ENST00000506426 GOLGA6DP0CG33 693 aa4.24□□□□□ -1.73
TRAPPC11-205ENST00000506426 MYBL2P10244 700 aa4.24□□□□□ -1.73
TRAPPC11-205ENST00000506426 GNAT1P11488 350 aa4.24□□□□□ -1.73
TRAPPC11-205ENST00000506426 PDE6AP16499 860 aa4.24□□□□□ -1.73
TRAPPC11-205ENST00000506426 ZSCAN20P17040 1043 aaPredicted RBP4.24□□□□□ -1.73
TRAPPC11-205ENST00000506426 ATF3P18847 181 aa4.24□□□□□ -1.73
TRAPPC11-205ENST00000506426 HLTFQ14527 1009 aaKnown RBP eCLIP4.24□□□□□ -1.73
TRAPPC11-205ENST00000506426 ZNF174Q15697 407 aa4.24□□□□□ -1.73
TRAPPC11-205ENST00000506426 GPR19Q15760 415 aa4.24□□□□□ -1.73
TRAPPC11-205ENST00000506426 DDB1Q16531 1140 aa4.24□□□□□ -1.73
TRAPPC11-205ENST00000506426 CCSAPQ6IQ19 270 aaPredicted RBP4.24□□□□□ -1.73
TRAPPC11-205ENST00000506426 EP400NLQ6ZTU2 488 aa4.24□□□□□ -1.73
TRAPPC11-205ENST00000506426 OSTM1Q86WC4 334 aa4.24□□□□□ -1.73
TRAPPC11-205ENST00000506426 PLD6Q8N2A8 252 aaKnown RBP4.24□□□□□ -1.73
TRAPPC11-205ENST00000506426 TMEM52Q8NDY8 209 aa4.24□□□□□ -1.73
TRAPPC11-205ENST00000506426 ASB11Q8WXH4 323 aa4.24□□□□□ -1.73
TRAPPC11-205ENST00000506426 DPF3Q92784 378 aa4.24□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms