RNA–Protein interactions for RNA: ENST00000506409.1

MED28-204, Transcript of mediator complex subunit 28, humanhuman

TSL 2

Gene MED28, Length 347 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MED28-204ENST00000506409 NBPF20Q3BBV1 942 aa17.83■□□□□ 0.44
MED28-204ENST00000506409 MYSM1Q5VVJ2 828 aa17.83■□□□□ 0.44
MED28-204ENST00000506409 TEX2Q8IWB9 1127 aa17.83■□□□□ 0.44
MED28-204ENST00000506409 SPATA33Q96N06 139 aa17.83■□□□□ 0.44
MED28-204ENST00000506409 PPP1R12CQ9BZL4 782 aa17.83■□□□□ 0.44
MED28-204ENST00000506409 EHMT1Q9H9B1 1298 aa17.83■□□□□ 0.44
MED28-204ENST00000506409 MLXIPQ9HAP2 919 aa17.83■□□□□ 0.44
MED28-204ENST00000506409 RIC8AQ9NPQ8 531 aa17.83■□□□□ 0.44
MED28-204ENST00000506409 PDRG1Q9NUG6 133 aa17.83■□□□□ 0.44
MED28-204ENST00000506409 PCDHA6Q9UN73 950 aa17.83■□□□□ 0.44
MED28-204ENST00000506409 PCDHA8Q9Y5H6 950 aa17.83■□□□□ 0.44
MED28-204ENST00000506409 SMCO2A6NFE2 343 aa17.82■□□□□ 0.44
MED28-204ENST00000506409 SPATA31C2B4DYI2 1134 aa17.82■□□□□ 0.44
MED28-204ENST00000506409 PRPF3O43395 683 aaKnown RBP17.82■□□□□ 0.44
MED28-204ENST00000506409 ANAPC15P60006 121 aa17.82■□□□□ 0.44
MED28-204ENST00000506409 CCT2P78371 535 aaKnown RBP17.82■□□□□ 0.44
MED28-204ENST00000506409 AKAP17AQ02040 695 aaKnown RBP17.82■□□□□ 0.44
MED28-204ENST00000506409 FPGSQ05932 587 aa17.82■□□□□ 0.44
MED28-204ENST00000506409 LRIT3Q3SXY7 679 aa17.82■□□□□ 0.44
MED28-204ENST00000506409 NFRKBQ6P4R8 1299 aa17.82■□□□□ 0.44
MED28-204ENST00000506409 NLRX1Q86UT6 975 aa17.82■□□□□ 0.44
MED28-204ENST00000506409 PHKBQ93100 1093 aa17.82■□□□□ 0.44
MED28-204ENST00000506409 GLT8D2Q9H1C3 349 aa17.82■□□□□ 0.44
MED28-204ENST00000506409 NCOA5Q9HCD5 579 aaKnown RBP17.82■□□□□ 0.44
MED28-204ENST00000506409 TRMT13Q9NUP7 481 aaKnown RBP17.82■□□□□ 0.44
MED28-204ENST00000506409 MYH7BA7E2Y1 1941 aa17.81■□□□□ 0.44
MED28-204ENST00000506409 SOX1O00570 391 aaPredicted RBP17.81■□□□□ 0.44
MED28-204ENST00000506409 SUPT20HL2P0C7V6 817 aa17.81■□□□□ 0.44
MED28-204ENST00000506409 SEMA3FQ13275 785 aa17.81■□□□□ 0.44
MED28-204ENST00000506409 NEDD9Q14511 834 aa17.81■□□□□ 0.44
MED28-204ENST00000506409 NTRK3Q16288 839 aa17.81■□□□□ 0.44
MED28-204ENST00000506409 HSDL1Q3SXM5 330 aa17.81■□□□□ 0.44
MED28-204ENST00000506409 MFSD5Q6N075 450 aa17.81■□□□□ 0.44
MED28-204ENST00000506409 PPP1R13LQ8WUF5 828 aa17.81■□□□□ 0.44
MED28-204ENST00000506409 KAT2BQ92831 832 aa17.81■□□□□ 0.44
MED28-204ENST00000506409 ZNF274Q96GC6 653 aaPredicted RBP17.81■□□□□ 0.44
MED28-204ENST00000506409 LARP6Q9BRS8 491 aaKnown RBP17.81■□□□□ 0.44
MED28-204ENST00000506409 HIPK3Q9H422 1215 aa17.81■□□□□ 0.44
MED28-204ENST00000506409 PPFIA3O75145 1194 aa17.8■□□□□ 0.44
MED28-204ENST00000506409 PPFIA4O75335 1185 aa17.8■□□□□ 0.44
MED28-204ENST00000506409 FOSP01100 380 aaPredicted RBP17.8■□□□□ 0.44
MED28-204ENST00000506409 ZNF286BP0CG31 522 aa17.8■□□□□ 0.44
MED28-204ENST00000506409 HOXD8P13378 290 aaPredicted RBP17.8■□□□□ 0.44
MED28-204ENST00000506409 IFNAR1P17181 557 aa17.8■□□□□ 0.44
MED28-204ENST00000506409 PTPN11Q06124 597 aaPredicted RBP17.8■□□□□ 0.44
MED28-204ENST00000506409 SHHQ15465 462 aa17.8■□□□□ 0.44
MED28-204ENST00000506409 PKN1Q16512 942 aa17.8■□□□□ 0.44
MED28-204ENST00000506409 C9orf50Q5SZB4 431 aa17.8■□□□□ 0.44
MED28-204ENST00000506409 METTL7BQ6UX53 244 aa17.8■□□□□ 0.44
MED28-204ENST00000506409 TMEM199Q8N511 208 aa17.8■□□□□ 0.44
MED28-204ENST00000506409 CCDC12Q8WUD4 166 aaPredicted RBP17.8■□□□□ 0.44
MED28-204ENST00000506409 GPRASP2Q96D09 838 aa17.8■□□□□ 0.44
MED28-204ENST00000506409 KATNAL1Q9BW62 490 aa17.8■□□□□ 0.44
MED28-204ENST00000506409 SLC26A6Q9BXS9 759 aa17.8■□□□□ 0.44
MED28-204ENST00000506409 RNF26Q9BY78 433 aaPredicted RBP17.8■□□□□ 0.44
MED28-204ENST00000506409 NOP56O00567 594 aaKnown RBP17.79■□□□□ 0.44
MED28-204ENST00000506409 CPLX1O14810 134 aa17.79■□□□□ 0.44
MED28-204ENST00000506409 F2P00734 622 aa17.79■□□□□ 0.44
MED28-204ENST00000506409 CYP2C18P33260 490 aa17.79■□□□□ 0.44
MED28-204ENST00000506409 EPHB4P54760 987 aa17.79■□□□□ 0.44
MED28-204ENST00000506409 AP3B2Q13367 1082 aa17.79■□□□□ 0.44
MED28-204ENST00000506409 CYFIP1Q7L576 1253 aa17.79■□□□□ 0.44
MED28-204ENST00000506409 LRCH3Q96II8 777 aa17.79■□□□□ 0.44
MED28-204ENST00000506409 CDHR1Q96JP9 859 aa17.79■□□□□ 0.44
MED28-204ENST00000506409 PGBD1Q96JS3 809 aa17.79■□□□□ 0.44
MED28-204ENST00000506409 NOC4LQ9BVI4 516 aaKnown RBP17.79■□□□□ 0.44
MED28-204ENST00000506409 ANO3Q9BYT9 981 aa17.79■□□□□ 0.44
MED28-204ENST00000506409 BCAS3Q9H6U6 928 aa17.79■□□□□ 0.44
MED28-204ENST00000506409 UMODL1Q5DID0 1318 aa17.78■□□□□ 0.44
MED28-204ENST00000506409 ESYT2A0FGR8 921 aa17.78■□□□□ 0.44
MED28-204ENST00000506409 CYP2C9P11712 490 aa17.78■□□□□ 0.44
MED28-204ENST00000506409 CSF2RAP15509 400 aa17.78■□□□□ 0.44
MED28-204ENST00000506409 ITGB5P18084 799 aa17.78■□□□□ 0.44
MED28-204ENST00000506409 PSEN2P49810 448 aa17.78■□□□□ 0.44
MED28-204ENST00000506409 STK3Q13188 491 aa17.78■□□□□ 0.44
MED28-204ENST00000506409 PPIGQ13427 754 aaKnown RBP eCLIP17.78■□□□□ 0.443e-8■□□□□ 10.6
MED28-204ENST00000506409 MTMR1Q13613 665 aa17.78■□□□□ 0.44
MED28-204ENST00000506409 MFSD10Q14728 455 aa17.78■□□□□ 0.44
MED28-204ENST00000506409 SESTD1Q86VW0 696 aa17.78■□□□□ 0.44
MED28-204ENST00000506409 TRIM22Q8IYM9 498 aa17.78■□□□□ 0.44
MED28-204ENST00000506409 C7orf31Q8N865 590 aa17.78■□□□□ 0.44
MED28-204ENST00000506409 SENP7Q9BQF6 1050 aa17.78■□□□□ 0.44
MED28-204ENST00000506409 ZMYND12Q9H0C1 365 aa17.78■□□□□ 0.44
MED28-204ENST00000506409 C6orf50Q9HD87 102 aa17.78■□□□□ 0.44
MED28-204ENST00000506409 TMEM260Q9NX78 707 aa17.78■□□□□ 0.44
MED28-204ENST00000506409 NOD1Q9Y239 953 aa17.78■□□□□ 0.44
MED28-204ENST00000506409 UBIAD1Q9Y5Z9 338 aa17.78■□□□□ 0.44
MED28-204ENST00000506409 SEC24BO95487 1268 aa17.77■□□□□ 0.44
MED28-204ENST00000506409 CLK2P49760 499 aaKnown RBP17.77■□□□□ 0.44
MED28-204ENST00000506409 KIAA0753Q2KHM9 967 aa17.77■□□□□ 0.44
MED28-204ENST00000506409 CPLX2Q6PUV4 134 aaKnown RBP17.77■□□□□ 0.44
MED28-204ENST00000506409 GIMAP8Q8ND71 665 aaPredicted RBP17.77■□□□□ 0.44
MED28-204ENST00000506409 ALG1Q9BT22 464 aa17.77■□□□□ 0.44
MED28-204ENST00000506409 JADE2Q9NQC1 790 aa17.77■□□□□ 0.44
MED28-204ENST00000506409 HAS3O00219 553 aa17.76■□□□□ 0.43
MED28-204ENST00000506409 KCNA2P16389 499 aa17.76■□□□□ 0.43
MED28-204ENST00000506409 GNA11P29992 359 aa17.76■□□□□ 0.43
MED28-204ENST00000506409 SREBF1P36956 1147 aa17.76■□□□□ 0.43
MED28-204ENST00000506409 CCL23P55773 120 aa17.76■□□□□ 0.43
MED28-204ENST00000506409 SP4Q02446 784 aa17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms