RNA–Protein interactions for RNA: ENST00000505874.1

LINC00616-202, long intergenic non-protein coding RNA 616, humanhuman

TSL 3

Gene LINC00616, Length 260 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00616-202ENST00000505874 SGSM3Q96HU1 749 aa6.37□□□□□ -1.39
LINC00616-202ENST00000505874 PHF20Q9BVI0 1012 aa6.37□□□□□ -1.39
LINC00616-202ENST00000505874 JAM3Q9BX67 310 aa6.37□□□□□ -1.39
LINC00616-202ENST00000505874 EPB41L1Q9H4G0 881 aa6.37□□□□□ -1.39
LINC00616-202ENST00000505874 ARHGEF4Q9NR80 690 aa6.37□□□□□ -1.39
LINC00616-202ENST00000505874 PPP1R1BQ9UD71 204 aaPredicted RBP6.37□□□□□ -1.39
LINC00616-202ENST00000505874 ZNF652Q9Y2D9 606 aa6.37□□□□□ -1.39
LINC00616-202ENST00000505874 THBS2P35442 1172 aa6.36□□□□□ -1.39
LINC00616-202ENST00000505874 ITGA1P56199 1179 aa6.36□□□□□ -1.39
LINC00616-202ENST00000505874 GJA9P57773 515 aa6.36□□□□□ -1.39
LINC00616-202ENST00000505874 RTP5Q14D33 572 aa6.36□□□□□ -1.39
LINC00616-202ENST00000505874 CR1LQ2VPA4 569 aa6.36□□□□□ -1.39
LINC00616-202ENST00000505874 YOD1Q5VVQ6 348 aaPredicted RBP6.36□□□□□ -1.39
LINC00616-202ENST00000505874 FERMT3Q86UX7 667 aa6.36□□□□□ -1.39
LINC00616-202ENST00000505874 CKAP2LQ8IYA6 745 aa6.36□□□□□ -1.39
LINC00616-202ENST00000505874 KYQ8NBH2 561 aa6.36□□□□□ -1.39
LINC00616-202ENST00000505874 ARRDC4Q8NCT1 418 aa6.36□□□□□ -1.39
LINC00616-202ENST00000505874 ST13P5Q8NFI4 369 aaPredicted RBP6.36□□□□□ -1.39
LINC00616-202ENST00000505874 PCDH18Q9HCL0 1135 aa6.36□□□□□ -1.39
LINC00616-202ENST00000505874 GPR27Q9NS67 375 aa6.36□□□□□ -1.39
LINC00616-202ENST00000505874 PPARGC1AQ9UBK2 798 aaKnown RBP6.36□□□□□ -1.39
LINC00616-202ENST00000505874 TCRBV5S2A0A599 114 aa6.35□□□□□ -1.39
LINC00616-202ENST00000505874 BLACEA4D250 179 aa6.35□□□□□ -1.39
LINC00616-202ENST00000505874 CCDC85CA6NKD9 419 aa6.35□□□□□ -1.39
LINC00616-202ENST00000505874 U2SURPO15042 1029 aaKnown RBP6.35□□□□□ -1.39
LINC00616-202ENST00000505874 NOBOXO60393 691 aa6.35□□□□□ -1.39
LINC00616-202ENST00000505874 CELA3BP08861 270 aa6.35□□□□□ -1.39
LINC00616-202ENST00000505874 PABPC1P11940 636 aaKnown RBP6.35□□□□□ -1.39
LINC00616-202ENST00000505874 NKX3-2P78367 333 aa6.35□□□□□ -1.39
LINC00616-202ENST00000505874 SKOR2Q2VWA4 1001 aaPredicted RBP6.35□□□□□ -1.39
LINC00616-202ENST00000505874 UBXN11Q5T124 520 aa6.35□□□□□ -1.39
LINC00616-202ENST00000505874 ERICH6BQ5W0A0 696 aa6.35□□□□□ -1.39
LINC00616-202ENST00000505874 KCNT2Q6UVM3 1135 aa6.35□□□□□ -1.39
LINC00616-202ENST00000505874 NSMFQ6X4W1 530 aa6.35□□□□□ -1.39
LINC00616-202ENST00000505874 ZNF761Q86XN6 746 aaPredicted RBP6.35□□□□□ -1.39
LINC00616-202ENST00000505874 ADAMTS17Q8TE56 1095 aa6.35□□□□□ -1.39
LINC00616-202ENST00000505874 OSBP2Q969R2 916 aa6.35□□□□□ -1.39
LINC00616-202ENST00000505874 BDH2Q9BUT1 245 aa6.35□□□□□ -1.39
LINC00616-202ENST00000505874 CDIP1Q9H305 208 aa6.35□□□□□ -1.39
LINC00616-202ENST00000505874 MYOTQ9UBF9 498 aa6.35□□□□□ -1.39
LINC00616-202ENST00000505874 TADA3O75528 432 aa6.34□□□□□ -1.39
LINC00616-202ENST00000505874 FGFR1P11362 822 aa6.34□□□□□ -1.39
LINC00616-202ENST00000505874 EMC4Q5J8M3 183 aa6.34□□□□□ -1.39
LINC00616-202ENST00000505874 LRRC47Q8N1G4 583 aaKnown RBP6.34□□□□□ -1.39
LINC00616-202ENST00000505874 TTLL6Q8N841 843 aa6.34□□□□□ -1.39
LINC00616-202ENST00000505874 PIP4K2CQ8TBX8 421 aa6.34□□□□□ -1.39
LINC00616-202ENST00000505874 TOE1Q96GM8 510 aaKnown RBP6.34□□□□□ -1.39
LINC00616-202ENST00000505874 ZSWIM3Q96MP5 696 aa6.34□□□□□ -1.39
LINC00616-202ENST00000505874 TANGO6Q9C0B7 1094 aa6.34□□□□□ -1.39
LINC00616-202ENST00000505874 NGRNQ9NPE2 291 aaKnown RBP6.34□□□□□ -1.39
LINC00616-202ENST00000505874 DTLQ9NZJ0 730 aa6.34□□□□□ -1.39
LINC00616-202ENST00000505874 DUSP10Q9Y6W6 482 aa6.34□□□□□ -1.39
LINC00616-202ENST00000505874 TRAV20A0A0B4J274 112 aa6.33□□□□□ -1.4
LINC00616-202ENST00000505874 RPL13P26373 211 aaKnown RBP6.33□□□□□ -1.4
LINC00616-202ENST00000505874 CNR2P34972 360 aa6.33□□□□□ -1.4
LINC00616-202ENST00000505874 IFRD2Q12894 506 aaPredicted RBP6.33□□□□□ -1.4
LINC00616-202ENST00000505874 NTRK3Q16288 839 aa6.33□□□□□ -1.4
LINC00616-202ENST00000505874 RGL3Q3MIN7 710 aa6.33□□□□□ -1.4
LINC00616-202ENST00000505874 SPATC1Q76KD6 591 aa6.33□□□□□ -1.4
LINC00616-202ENST00000505874 DCAF4Q8WV16 495 aa6.33□□□□□ -1.4
LINC00616-202ENST00000505874 LNPKQ9C0E8 428 aa6.33□□□□□ -1.4
LINC00616-202ENST00000505874 SMOC1Q9H4F8 434 aa6.33□□□□□ -1.4
LINC00616-202ENST00000505874 KRIT1O00522 736 aa6.32□□□□□ -1.4
LINC00616-202ENST00000505874 DDX3XO00571 662 aaKnown RBP eCLIP6.32□□□□□ -1.4
LINC00616-202ENST00000505874 SLC27A2O14975 620 aa6.32□□□□□ -1.4
LINC00616-202ENST00000505874 ATP2B1P20020 1258 aa6.32□□□□□ -1.4
LINC00616-202ENST00000505874 GRK2P25098 689 aa6.32□□□□□ -1.4
LINC00616-202ENST00000505874 GRK3P35626 688 aa6.32□□□□□ -1.4
LINC00616-202ENST00000505874 PLP2Q04941 152 aa6.32□□□□□ -1.4
LINC00616-202ENST00000505874 ADAM9Q13443 819 aa6.32□□□□□ -1.4
LINC00616-202ENST00000505874 TEPPQ6URK8 271 aa6.32□□□□□ -1.4
LINC00616-202ENST00000505874 RSPO2Q6UXX9 243 aaPredicted RBP6.32□□□□□ -1.4
LINC00616-202ENST00000505874 LBX2Q6XYB7 198 aa6.32□□□□□ -1.4
LINC00616-202ENST00000505874 KCNJ15Q99712 375 aa6.32□□□□□ -1.4
LINC00616-202ENST00000505874 PDPK1O15530 556 aa6.31□□□□□ -1.4
LINC00616-202ENST00000505874 MAFKO60675 156 aa6.31□□□□□ -1.4
LINC00616-202ENST00000505874 LRG1P02750 347 aa6.31□□□□□ -1.4
LINC00616-202ENST00000505874 COL6A2P12110 1019 aa6.31□□□□□ -1.4
LINC00616-202ENST00000505874 GRIN1Q05586 938 aa6.31□□□□□ -1.4
LINC00616-202ENST00000505874 KIZQ2M2Z5 673 aa6.31□□□□□ -1.4
LINC00616-202ENST00000505874 ZFYVE27Q5T4F4 411 aa6.31□□□□□ -1.4
LINC00616-202ENST00000505874 PRAMEF18Q5VWM3 479 aa6.31□□□□□ -1.4
LINC00616-202ENST00000505874 MCTP2Q6DN12 878 aa6.31□□□□□ -1.4
LINC00616-202ENST00000505874 PRRT2Q7Z6L0 340 aaPredicted RBP6.31□□□□□ -1.4
LINC00616-202ENST00000505874 RBM12BQ8IXT5 1001 aaKnown RBP6.31□□□□□ -1.4
LINC00616-202ENST00000505874 PHOSPHO1Q8TCT1 267 aa6.31□□□□□ -1.4
LINC00616-202ENST00000505874 SPATA9Q9BWV2 254 aa6.31□□□□□ -1.4
LINC00616-202ENST00000505874 SLC6A20Q9NP91 592 aa6.31□□□□□ -1.4
LINC00616-202ENST00000505874 RBPJLQ9UBG7 517 aa6.31□□□□□ -1.4
LINC00616-202ENST00000505874 ASH2LQ9UBL3 628 aa6.31□□□□□ -1.4
LINC00616-202ENST00000505874 PFDN2Q9UHV9 154 aa6.31□□□□□ -1.4
LINC00616-202ENST00000505874 MSRB2Q9Y3D2 182 aa6.31□□□□□ -1.4
LINC00616-202ENST00000505874 GNAT1P11488 350 aa6.3□□□□□ -1.4
LINC00616-202ENST00000505874 GTF2F1P35269 517 aaKnown RBP eCLIP6.3□□□□□ -1.4
LINC00616-202ENST00000505874 GPR85P60893 370 aa6.3□□□□□ -1.4
LINC00616-202ENST00000505874 MTERF2Q49AM1 385 aa6.3□□□□□ -1.4
LINC00616-202ENST00000505874 PRR31Q5SQ13 230 aa6.3□□□□□ -1.4
LINC00616-202ENST00000505874 TMC5Q6UXY8 1006 aa6.3□□□□□ -1.4
LINC00616-202ENST00000505874 TXNDC5Q8NBS9 432 aaKnown RBP6.3□□□□□ -1.4
LINC00616-202ENST00000505874 CLIC6Q96NY7 704 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms