RNA–Protein interactions for RNA: ENST00000505615.1

VCAN-206, Transcript of versican, humanhuman

TSL 5

Gene VCAN, Length 810 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-206ENST00000505615 G3BP1Q13283 466 aaKnown RBP eCLIP8.43□□□□□ -1.06
VCAN-206ENST00000505615 GPNMBQ14956 572 aa8.43□□□□□ -1.06
VCAN-206ENST00000505615 TCTN1Q2MV58 587 aa8.43□□□□□ -1.06
VCAN-206ENST00000505615 NOL8Q76FK4 1167 aaKnown RBP8.43□□□□□ -1.06
VCAN-206ENST00000505615 FAM133AQ8N9E0 248 aa8.43□□□□□ -1.06
VCAN-206ENST00000505615 SDR42E1Q8WUS8 393 aa8.43□□□□□ -1.06
VCAN-206ENST00000505615 ZMYND15Q9H091 742 aa8.43□□□□□ -1.06
VCAN-206ENST00000505615 PDGFCQ9NRA1 345 aa8.43□□□□□ -1.06
VCAN-206ENST00000505615 SWAP70Q9UH65 585 aa8.43□□□□□ -1.06
VCAN-206ENST00000505615 MUTYHQ9UIF7 546 aa8.43□□□□□ -1.06
VCAN-206ENST00000505615 MAP1BP46821 2468 aaKnown RBP8.43□□□□□ -1.06
VCAN-206ENST00000505615 BAHCC1Q9P281 2608 aa8.43□□□□□ -1.06
VCAN-206ENST00000505615 DNAH14Q0VDD8 3507 aa8.42□□□□□ -1.06
VCAN-206ENST00000505615 MAGEB6P1A0A0J9YX57 407 aa8.42□□□□□ -1.06
VCAN-206ENST00000505615 GJB5O95377 273 aa8.42□□□□□ -1.06
VCAN-206ENST00000505615 GNAI3P08754 354 aa8.42□□□□□ -1.06
VCAN-206ENST00000505615 CDK8P49336 464 aa8.42□□□□□ -1.06
VCAN-206ENST00000505615 WDR4P57081 412 aaKnown RBP8.42□□□□□ -1.06
VCAN-206ENST00000505615 PURAQ00577 322 aaKnown RBP8.42□□□□□ -1.06
VCAN-206ENST00000505615 TAPT1Q6NXT6 567 aa8.42□□□□□ -1.06
VCAN-206ENST00000505615 TMED8Q6PL24 325 aaPredicted RBP8.42□□□□□ -1.06
VCAN-206ENST00000505615 CPXCR1Q8N123 301 aa8.42□□□□□ -1.06
VCAN-206ENST00000505615 ANKRD35Q8N283 1001 aa8.42□□□□□ -1.06
VCAN-206ENST00000505615 PPP1R13LQ8WUF5 828 aa8.42□□□□□ -1.06
VCAN-206ENST00000505615 PABPC5Q96DU9 382 aaKnown RBP8.42□□□□□ -1.06
VCAN-206ENST00000505615 MRPL38Q96DV4 380 aaKnown RBP8.42□□□□□ -1.06
VCAN-206ENST00000505615 CCDC17Q96LX7 622 aa8.42□□□□□ -1.06
VCAN-206ENST00000505615 PURBQ96QR8 312 aaKnown RBP8.42□□□□□ -1.06
VCAN-206ENST00000505615 CTAGE1Q96RT6 745 aa8.42□□□□□ -1.06
VCAN-206ENST00000505615 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.42□□□□□ -1.06
VCAN-206ENST00000505615 CRNKL1Q9BZJ0 848 aaKnown RBP8.42□□□□□ -1.06
VCAN-206ENST00000505615 FTOQ9C0B1 505 aaKnown RBP eCLIP8.42□□□□□ -1.06
VCAN-206ENST00000505615 AP5M1Q9H0R1 490 aa8.42□□□□□ -1.06
VCAN-206ENST00000505615 SLC38A10Q9HBR0 1119 aa8.42□□□□□ -1.06
VCAN-206ENST00000505615 RAVER2Q9HCJ3 691 aaKnown RBP8.42□□□□□ -1.06
VCAN-206ENST00000505615 MRS2Q9HD23 443 aa8.42□□□□□ -1.06
VCAN-206ENST00000505615 GOPCQ9HD26 462 aa8.42□□□□□ -1.06
VCAN-206ENST00000505615 NOB1Q9ULX3 412 aaKnown RBP8.42□□□□□ -1.06
VCAN-206ENST00000505615 Q9Y3F1 56 aa8.42□□□□□ -1.06
VCAN-206ENST00000505615 CHD8Q9HCK8 2581 aa8.41□□□□□ -1.06
VCAN-206ENST00000505615 CYP2D7A0A087X1C5 515 aa8.41□□□□□ -1.06
VCAN-206ENST00000505615 SOBPA7XYQ1 873 aa8.41□□□□□ -1.06
VCAN-206ENST00000505615 NDUFB10O96000 172 aa8.41□□□□□ -1.06
VCAN-206ENST00000505615 PDE6AP16499 860 aa8.41□□□□□ -1.06
VCAN-206ENST00000505615 KCNJ6P48051 423 aa8.41□□□□□ -1.06
VCAN-206ENST00000505615 C16orf86Q6ZW13 317 aa8.41□□□□□ -1.06
VCAN-206ENST00000505615 RNF135Q8IUD6 432 aa8.41□□□□□ -1.06
VCAN-206ENST00000505615 FBXO16Q8IX29 292 aaPredicted RBP8.41□□□□□ -1.06
VCAN-206ENST00000505615 LCORLQ8N3X6 602 aa8.41□□□□□ -1.06
VCAN-206ENST00000505615 CHST13Q8NET6 341 aa8.41□□□□□ -1.06
VCAN-206ENST00000505615 EDAQ92838 391 aa8.41□□□□□ -1.06
VCAN-206ENST00000505615 CDK15Q96Q40 435 aa8.41□□□□□ -1.06
VCAN-206ENST00000505615 RAD9AQ99638 391 aa8.41□□□□□ -1.06
VCAN-206ENST00000505615 PRRX2Q99811 253 aa8.41□□□□□ -1.06
VCAN-206ENST00000505615 C17orf80Q9BSJ5 609 aa8.41□□□□□ -1.06
VCAN-206ENST00000505615 API5Q9BZZ5 524 aaKnown RBP8.41□□□□□ -1.06
VCAN-206ENST00000505615 KANSL2Q9H9L4 492 aa8.41□□□□□ -1.06
VCAN-206ENST00000505615 A1CFQ9NQ94 594 aaKnown RBP8.41□□□□□ -1.06
VCAN-206ENST00000505615 FBXO40Q9UH90 709 aa8.41□□□□□ -1.06
VCAN-206ENST00000505615 CHD6Q8TD26 2715 aa8.41□□□□□ -1.06
VCAN-206ENST00000505615 MYO10Q9HD67 2058 aa8.41□□□□□ -1.06
VCAN-206ENST00000505615 TCRBV5S4A2TA0A5A2 114 aa8.4□□□□□ -1.06
VCAN-206ENST00000505615 TMEM221A6NGB7 291 aa8.4□□□□□ -1.06
VCAN-206ENST00000505615 ASB14A6NK59 587 aa8.4□□□□□ -1.06
VCAN-206ENST00000505615 M0R296 226 aa8.4□□□□□ -1.06
VCAN-206ENST00000505615 RAD21O60216 631 aa8.4□□□□□ -1.06
VCAN-206ENST00000505615 CXCL10P02778 98 aa8.4□□□□□ -1.06
VCAN-206ENST00000505615 LTBRP36941 435 aa8.4□□□□□ -1.06
VCAN-206ENST00000505615 SMAD2Q15796 467 aaKnown RBP8.4□□□□□ -1.06
VCAN-206ENST00000505615 NBPF20Q3BBV1 942 aa8.4□□□□□ -1.06
VCAN-206ENST00000505615 TIGD5Q53EQ6 642 aa8.4□□□□□ -1.06
VCAN-206ENST00000505615 TCEAL5Q5H9L2 206 aa8.4□□□□□ -1.06
VCAN-206ENST00000505615 IQSEC1Q6DN90 963 aa8.4□□□□□ -1.06
VCAN-206ENST00000505615 ERMP1Q7Z2K6 904 aa8.4□□□□□ -1.06
VCAN-206ENST00000505615 PRPF38AQ8NAV1 312 aaKnown RBP8.4□□□□□ -1.06
VCAN-206ENST00000505615 UPF3BQ9BZI7 483 aaKnown RBP8.4□□□□□ -1.06
VCAN-206ENST00000505615 CCDC8Q9H0W5 538 aaPredicted RBP8.4□□□□□ -1.06
VCAN-206ENST00000505615 POLR3EQ9NVU0 708 aa8.4□□□□□ -1.06
VCAN-206ENST00000505615 FAM50BQ9Y247 325 aa8.4□□□□□ -1.06
VCAN-206ENST00000505615 OTOGLQ3ZCN5 2332 aa8.4□□□□□ -1.07
VCAN-206ENST00000505615 PROB1E7EW31 1015 aa8.39□□□□□ -1.07
VCAN-206ENST00000505615 E9PSI1 815 aa8.39□□□□□ -1.07
VCAN-206ENST00000505615 PRKAB2O43741 272 aa8.39□□□□□ -1.07
VCAN-206ENST00000505615 NBNO60934 754 aa8.39□□□□□ -1.07
VCAN-206ENST00000505615 ZBED4O75132 1171 aa8.39□□□□□ -1.07
VCAN-206ENST00000505615 OAZ1P54368 228 aa8.39□□□□□ -1.07
VCAN-206ENST00000505615 VCPP55072 806 aaKnown RBP8.39□□□□□ -1.07
VCAN-206ENST00000505615 BFSP2Q13515 415 aa8.39□□□□□ -1.07
VCAN-206ENST00000505615 AMHR2Q16671 573 aa8.39□□□□□ -1.07
VCAN-206ENST00000505615 LRRFIP1Q32MZ4 808 aaKnown RBP8.39□□□□□ -1.07
VCAN-206ENST00000505615 DUSP28Q4G0W2 176 aa8.39□□□□□ -1.07
VCAN-206ENST00000505615 C12orf60Q5U649 245 aa8.39□□□□□ -1.07
VCAN-206ENST00000505615 NFRKBQ6P4R8 1299 aa8.39□□□□□ -1.07
VCAN-206ENST00000505615 CNKSR3Q6P9H4 555 aa8.39□□□□□ -1.07
VCAN-206ENST00000505615 EEPD1Q7L9B9 569 aa8.39□□□□□ -1.07
VCAN-206ENST00000505615 ASCL5Q7RTU5 278 aa8.39□□□□□ -1.07
VCAN-206ENST00000505615 RPAINQ86UA6 219 aa8.39□□□□□ -1.07
VCAN-206ENST00000505615 KRI1Q8N9T8 703 aaKnown RBP8.39□□□□□ -1.07
VCAN-206ENST00000505615 RETREG2Q8NC44 543 aa8.39□□□□□ -1.07
VCAN-206ENST00000505615 FAM174AQ8TBP5 190 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms