RNA–Protein interactions for RNA: ENST00000505331.1

CPNE4-204, Transcript of copine 4, humanhuman

TSL 5

Gene CPNE4, Length 318 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-204ENST00000505331 USTQ9Y2C2 406 aa5.16□□□□□ -1.58
CPNE4-204ENST00000505331 RBM19Q9Y4C8 960 aaKnown RBP5.16□□□□□ -1.58
CPNE4-204ENST00000505331 GPSM3Q9Y4H4 160 aa5.16□□□□□ -1.58
CPNE4-204ENST00000505331 RIPK3Q9Y572 518 aa5.16□□□□□ -1.58
CPNE4-204ENST00000505331 ADGRA3Q8IWK6 1321 aa5.16□□□□□ -1.58
CPNE4-204ENST00000505331 COL11A1P12107 1806 aaPredicted RBP5.16□□□□□ -1.58
CPNE4-204ENST00000505331 OTOGLQ3ZCN5 2332 aa5.15□□□□□ -1.58
CPNE4-204ENST00000505331 EYA2O00167 538 aa5.15□□□□□ -1.59
CPNE4-204ENST00000505331 ATP2A1O14983 1001 aa5.15□□□□□ -1.59
CPNE4-204ENST00000505331 PER2O15055 1255 aa5.15□□□□□ -1.59
CPNE4-204ENST00000505331 LAMTOR5O43504 91 aa5.15□□□□□ -1.59
CPNE4-204ENST00000505331 ITGB1P05556 798 aa5.15□□□□□ -1.59
CPNE4-204ENST00000505331 RETP07949 1114 aa5.15□□□□□ -1.59
CPNE4-204ENST00000505331 MMP3P08254 477 aa5.15□□□□□ -1.59
CPNE4-204ENST00000505331 HOXD8P13378 290 aaPredicted RBP5.15□□□□□ -1.59
CPNE4-204ENST00000505331 PLA2G2AP14555 144 aa5.15□□□□□ -1.59
CPNE4-204ENST00000505331 PPP4CP60510 307 aa5.15□□□□□ -1.59
CPNE4-204ENST00000505331 RBM10P98175 930 aaKnown RBP5.15□□□□□ -1.59
CPNE4-204ENST00000505331 ITIH3Q06033 890 aa5.15□□□□□ -1.59
CPNE4-204ENST00000505331 KCNC3Q14003 757 aa5.15□□□□□ -1.59
CPNE4-204ENST00000505331 MBTPS1Q14703 1052 aa5.15□□□□□ -1.59
CPNE4-204ENST00000505331 TPRNQ4KMQ1 711 aa5.15□□□□□ -1.59
CPNE4-204ENST00000505331 PLEKHG4Q58EX7 1191 aa5.15□□□□□ -1.59
CPNE4-204ENST00000505331 TMEM63BQ5T3F8 832 aa5.15□□□□□ -1.59
CPNE4-204ENST00000505331 ZNF618Q5T7W0 954 aa5.15□□□□□ -1.59
CPNE4-204ENST00000505331 LAIR1Q6GTX8 287 aa5.15□□□□□ -1.59
CPNE4-204ENST00000505331 GDF6Q6KF10 455 aaPredicted RBP5.15□□□□□ -1.59
CPNE4-204ENST00000505331 RUFY4Q6ZNE9 571 aa5.15□□□□□ -1.59
CPNE4-204ENST00000505331 KIAA1211Q6ZU35 1233 aa5.15□□□□□ -1.59
CPNE4-204ENST00000505331 TSPYL6Q8N831 410 aa5.15□□□□□ -1.59
CPNE4-204ENST00000505331 KLHDC4Q8TBB5 520 aa5.15□□□□□ -1.59
CPNE4-204ENST00000505331 MICAL1Q8TDZ2 1067 aa5.15□□□□□ -1.59
CPNE4-204ENST00000505331 PPP1R13LQ8WUF5 828 aa5.15□□□□□ -1.59
CPNE4-204ENST00000505331 POF1BQ8WVV4 589 aa5.15□□□□□ -1.59
CPNE4-204ENST00000505331 SEPT8Q92599 483 aa5.15□□□□□ -1.59
CPNE4-204ENST00000505331 ADAM7Q9H2U9 754 aa5.15□□□□□ -1.59
CPNE4-204ENST00000505331 TBC1D17Q9HA65 648 aa5.15□□□□□ -1.59
CPNE4-204ENST00000505331 CYP26B1Q9NR63 512 aa5.15□□□□□ -1.59
CPNE4-204ENST00000505331 PDGFCQ9NRA1 345 aa5.15□□□□□ -1.59
CPNE4-204ENST00000505331 AATFQ9NY61 560 aaKnown RBP eCLIP5.15□□□□□ -1.59
CPNE4-204ENST00000505331 RAI14Q9P0K7 980 aa5.15□□□□□ -1.59
CPNE4-204ENST00000505331 RAB23Q9ULC3 237 aa5.15□□□□□ -1.59
CPNE4-204ENST00000505331 WASF3Q9UPY6 502 aa5.15□□□□□ -1.59
CPNE4-204ENST00000505331 TMX2Q9Y320 296 aa5.15□□□□□ -1.59
CPNE4-204ENST00000505331 RAD50Q92878 1312 aa5.15□□□□□ -1.59
CPNE4-204ENST00000505331 SMG1Q96Q15 3661 aaKnown RBP5.15□□□□□ -1.59
CPNE4-204ENST00000505331 ATAD5Q96QE3 1844 aa5.14□□□□□ -1.59
CPNE4-204ENST00000505331 LOC101059915A0A1B0GWI6 518 aaPredicted RBP5.14□□□□□ -1.59
CPNE4-204ENST00000505331 KRBA1A5PL33 1030 aa5.14□□□□□ -1.59
CPNE4-204ENST00000505331 E9PSI1 815 aa5.14□□□□□ -1.59
CPNE4-204ENST00000505331 MPHOSPH10O00566 681 aaKnown RBP5.14□□□□□ -1.59
CPNE4-204ENST00000505331 GDF9O60383 454 aa5.14□□□□□ -1.59
CPNE4-204ENST00000505331 ALDH1L1O75891 902 aa5.14□□□□□ -1.59
CPNE4-204ENST00000505331 KCNK5O95279 499 aa5.14□□□□□ -1.59
CPNE4-204ENST00000505331 SHMT1P34896 483 aa5.14□□□□□ -1.59
CPNE4-204ENST00000505331 MTHFRP42898 656 aa5.14□□□□□ -1.59
CPNE4-204ENST00000505331 CNTN2Q02246 1040 aa5.14□□□□□ -1.59
CPNE4-204ENST00000505331 CSTF1Q05048 431 aaKnown RBP5.14□□□□□ -1.59
CPNE4-204ENST00000505331 PTK7Q13308 1070 aa5.14□□□□□ -1.59
CPNE4-204ENST00000505331 BTG3Q14201 252 aaPredicted RBP5.14□□□□□ -1.59
CPNE4-204ENST00000505331 PDE12Q6L8Q7 609 aaKnown RBP5.14□□□□□ -1.59
CPNE4-204ENST00000505331 C19orf48Q6RUI8 117 aa5.14□□□□□ -1.59
CPNE4-204ENST00000505331 SLC4A10Q6U841 1118 aa5.14□□□□□ -1.59
CPNE4-204ENST00000505331 TTC6Q86TZ1 520 aa5.14□□□□□ -1.59
CPNE4-204ENST00000505331 FBXO16Q8IX29 292 aaPredicted RBP5.14□□□□□ -1.59
CPNE4-204ENST00000505331 ZNF687Q8N1G0 1237 aa5.14□□□□□ -1.59
CPNE4-204ENST00000505331 CHST13Q8NET6 341 aa5.14□□□□□ -1.59
CPNE4-204ENST00000505331 OR6J1Q8NGC5 347 aa5.14□□□□□ -1.59
CPNE4-204ENST00000505331 RASGRP4Q8TDF6 673 aa5.14□□□□□ -1.59
CPNE4-204ENST00000505331 NELL1Q92832 810 aa5.14□□□□□ -1.59
CPNE4-204ENST00000505331 RNF166Q96A37 237 aaPredicted RBP5.14□□□□□ -1.59
CPNE4-204ENST00000505331 APOL5Q9BWW9 433 aa5.14□□□□□ -1.59
CPNE4-204ENST00000505331 BICC1Q9H694 974 aaKnown RBP5.14□□□□□ -1.59
CPNE4-204ENST00000505331 ARHGEF10LQ9HCE6 1279 aa5.14□□□□□ -1.59
CPNE4-204ENST00000505331 VTA1Q9NP79 307 aa5.14□□□□□ -1.59
CPNE4-204ENST00000505331 FBXO28Q9NVF7 368 aa5.14□□□□□ -1.59
CPNE4-204ENST00000505331 RAI2Q9Y5P3 530 aa5.14□□□□□ -1.59
CPNE4-204ENST00000505331 NBEAQ8NFP9 2946 aa5.14□□□□□ -1.59
CPNE4-204ENST00000505331 RALGAPA2Q2PPJ7 1873 aa5.13□□□□□ -1.59
CPNE4-204ENST00000505331 SPTBN2O15020 2390 aa5.13□□□□□ -1.59
CPNE4-204ENST00000505331 LOC400499M0QZD8 3231 aa5.13□□□□□ -1.59
CPNE4-204ENST00000505331 SMCHD1A6NHR9 2005 aa5.13□□□□□ -1.59
CPNE4-204ENST00000505331 A6NJR5 290 aa5.13□□□□□ -1.59
CPNE4-204ENST00000505331 RSPH10B2B2RC85 870 aa5.13□□□□□ -1.59
CPNE4-204ENST00000505331 EOMESO95936 686 aa5.13□□□□□ -1.59
CPNE4-204ENST00000505331 CFHP08603 1231 aa5.13□□□□□ -1.59
CPNE4-204ENST00000505331 RSPH10BP0C881 870 aa5.13□□□□□ -1.59
CPNE4-204ENST00000505331 SPINK2P20155 84 aa5.13□□□□□ -1.59
CPNE4-204ENST00000505331 SLC4A3P48751 1232 aa5.13□□□□□ -1.59
CPNE4-204ENST00000505331 UBE3AQ05086 875 aa5.13□□□□□ -1.59
CPNE4-204ENST00000505331 FOXC1Q12948 553 aa5.13□□□□□ -1.59
CPNE4-204ENST00000505331 CCDC27Q2M243 656 aa5.13□□□□□ -1.59
CPNE4-204ENST00000505331 TRIM71Q2Q1W2 868 aaKnown RBP5.13□□□□□ -1.59
CPNE4-204ENST00000505331 COL28A1Q2UY09 1125 aa5.13□□□□□ -1.59
CPNE4-204ENST00000505331 XRRA1Q6P2D8 792 aa5.13□□□□□ -1.59
CPNE4-204ENST00000505331 TMEM179Q6ZVK1 233 aa5.13□□□□□ -1.59
CPNE4-204ENST00000505331 EEPD1Q7L9B9 569 aa5.13□□□□□ -1.59
CPNE4-204ENST00000505331 ZNF605Q86T29 641 aa5.13□□□□□ -1.59
CPNE4-204ENST00000505331 CELF5Q8N6W0 485 aaKnown RBP5.13□□□□□ -1.59
CPNE4-204ENST00000505331 ANKRD44Q8N8A2 993 aa5.13□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 73.6 ms