RNA–Protein interactions for RNA: ENST00000504663.1

TPM3-217, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 870 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-217ENST00000504663 MXRA8Q9BRK3 442 aa11.75□□□□□ -0.53
TPM3-217ENST00000504663 SERTAD1Q9UHV2 236 aa11.75□□□□□ -0.53
TPM3-217ENST00000504663 PNMA3Q9UL41 463 aa11.75□□□□□ -0.53
TPM3-217ENST00000504663 CTDP1Q9Y5B0 961 aaPredicted RBP11.75□□□□□ -0.53
TPM3-217ENST00000504663 MGAMO43451 1857 aa11.74□□□□□ -0.53
TPM3-217ENST00000504663 MANSC4A6NHS7 340 aaPredicted RBP11.74□□□□□ -0.53
TPM3-217ENST00000504663 TMEM88BA6NKF7 163 aa11.74□□□□□ -0.53
TPM3-217ENST00000504663 POLR2DO15514 142 aaKnown RBP11.74□□□□□ -0.53
TPM3-217ENST00000504663 DHX15O43143 795 aaKnown RBP11.74□□□□□ -0.53
TPM3-217ENST00000504663 SLC25A27O95847 323 aa11.74□□□□□ -0.53
TPM3-217ENST00000504663 TECP42680 631 aa11.74□□□□□ -0.53
TPM3-217ENST00000504663 TXKP42681 527 aa11.74□□□□□ -0.53
TPM3-217ENST00000504663 ITGB3BPQ13352 177 aaPredicted RBP11.74□□□□□ -0.53
TPM3-217ENST00000504663 TMEM119Q4V9L6 283 aa11.74□□□□□ -0.53
TPM3-217ENST00000504663 HYIQ5T013 277 aa11.74□□□□□ -0.53
TPM3-217ENST00000504663 VSIG10LQ86VR7 867 aa11.74□□□□□ -0.53
TPM3-217ENST00000504663 ZNF784Q8NCA9 323 aaPredicted RBP11.74□□□□□ -0.53
TPM3-217ENST00000504663 ERCC4Q92889 916 aaPredicted RBP11.74□□□□□ -0.53
TPM3-217ENST00000504663 SYAP1Q96A49 352 aaPredicted RBP11.74□□□□□ -0.53
TPM3-217ENST00000504663 INPP4AQ96PE3 977 aaPredicted RBP11.74□□□□□ -0.53
TPM3-217ENST00000504663 UIMC1Q96RL1 719 aa11.74□□□□□ -0.53
TPM3-217ENST00000504663 RMDN3Q96TC7 470 aa11.74□□□□□ -0.53
TPM3-217ENST00000504663 TTC12Q9H892 705 aaPredicted RBP11.74□□□□□ -0.53
TPM3-217ENST00000504663 EFCC1Q9HA90 598 aa11.74□□□□□ -0.53
TPM3-217ENST00000504663 ZCCHC17Q9NP64 241 aaKnown RBP11.74□□□□□ -0.53
TPM3-217ENST00000504663 JADE2Q9NQC1 790 aa11.74□□□□□ -0.53
TPM3-217ENST00000504663 DISC1Q9NRI5 854 aa11.74□□□□□ -0.53
TPM3-217ENST00000504663 FAM13BQ9NYF5 915 aa11.74□□□□□ -0.53
TPM3-217ENST00000504663 FBXO40Q9UH90 709 aa11.74□□□□□ -0.53
TPM3-217ENST00000504663 PFASO15067 1338 aa11.74□□□□□ -0.53
TPM3-217ENST00000504663 A0A087WWV3 80 aa11.73□□□□□ -0.53
TPM3-217ENST00000504663 EML1O00423 815 aa11.73□□□□□ -0.53
TPM3-217ENST00000504663 KINO60870 393 aaKnown RBP11.73□□□□□ -0.53
TPM3-217ENST00000504663 COPB2P35606 906 aa11.73□□□□□ -0.53
TPM3-217ENST00000504663 ALDH5A1P51649 535 aaPredicted RBP11.73□□□□□ -0.53
TPM3-217ENST00000504663 PDIA5Q14554 519 aa11.73□□□□□ -0.53
TPM3-217ENST00000504663 FAM110CQ1W6H9 321 aa11.73□□□□□ -0.53
TPM3-217ENST00000504663 KCNK18Q7Z418 384 aa11.73□□□□□ -0.53
TPM3-217ENST00000504663 NCAPG2Q86XI2 1143 aa11.73□□□□□ -0.53
TPM3-217ENST00000504663 PLA2G4DQ86XP0 818 aa11.73□□□□□ -0.53
TPM3-217ENST00000504663 IFNL1Q8IU54 200 aa11.73□□□□□ -0.53
TPM3-217ENST00000504663 CKAP2LQ8IYA6 745 aa11.73□□□□□ -0.53
TPM3-217ENST00000504663 GRAMD1CQ8IYS0 662 aa11.73□□□□□ -0.53
TPM3-217ENST00000504663 PDILTQ8N807 584 aa11.73□□□□□ -0.53
TPM3-217ENST00000504663 SPATA20Q8TB22 786 aa11.73□□□□□ -0.53
TPM3-217ENST00000504663 FAM20AQ96MK3 541 aa11.73□□□□□ -0.53
TPM3-217ENST00000504663 PARK7Q99497 189 aaKnown RBP11.73□□□□□ -0.53
TPM3-217ENST00000504663 WDR11Q9BZH6 1224 aa11.73□□□□□ -0.53
TPM3-217ENST00000504663 TNMDQ9H2S6 317 aa11.73□□□□□ -0.53
TPM3-217ENST00000504663 EHMT1Q9H9B1 1298 aa11.73□□□□□ -0.53
TPM3-217ENST00000504663 AGO4Q9HCK5 861 aaKnown RBP11.73□□□□□ -0.53
TPM3-217ENST00000504663 BLOC1S4Q9NUP1 217 aa11.73□□□□□ -0.53
TPM3-217ENST00000504663 TUBE1Q9UJT0 475 aa11.73□□□□□ -0.53
TPM3-217ENST00000504663 DOCK3Q8IZD9 2030 aa11.72□□□□□ -0.53
TPM3-217ENST00000504663 ARID2Q68CP9 1835 aa11.72□□□□□ -0.53
TPM3-217ENST00000504663 RASSF10A6NK89 507 aa11.72□□□□□ -0.53
TPM3-217ENST00000504663 NR3C2P08235 984 aa11.72□□□□□ -0.53
TPM3-217ENST00000504663 PLCG1P19174 1290 aa11.72□□□□□ -0.53
TPM3-217ENST00000504663 GCLCP48506 637 aaPredicted RBP11.72□□□□□ -0.53
TPM3-217ENST00000504663 SETQ01105 290 aaPredicted RBP11.72□□□□□ -0.53
TPM3-217ENST00000504663 PPP2R5CQ13362 524 aa11.72□□□□□ -0.53
TPM3-217ENST00000504663 PNOCQ13519 176 aa11.72□□□□□ -0.53
TPM3-217ENST00000504663 NT5DC1Q5TFE4 455 aa11.72□□□□□ -0.53
TPM3-217ENST00000504663 XRRA1Q6P2D8 792 aa11.72□□□□□ -0.53
TPM3-217ENST00000504663 OTOP1Q7RTM1 612 aa11.72□□□□□ -0.53
TPM3-217ENST00000504663 CABP7Q86V35 215 aa11.72□□□□□ -0.53
TPM3-217ENST00000504663 SLFN12Q8IYM2 578 aa11.72□□□□□ -0.53
TPM3-217ENST00000504663 ANKRD13CQ8N6S4 541 aa11.72□□□□□ -0.53
TPM3-217ENST00000504663 DNERQ8NFT8 737 aa11.72□□□□□ -0.53
TPM3-217ENST00000504663 MORC4Q8TE76 937 aa11.72□□□□□ -0.53
TPM3-217ENST00000504663 DHX58Q96C10 678 aa11.72□□□□□ -0.53
TPM3-217ENST00000504663 PANK2Q9BZ23 570 aa11.72□□□□□ -0.53
TPM3-217ENST00000504663 MROH8Q9H579 483 aa11.72□□□□□ -0.53
TPM3-217ENST00000504663 KCNH7Q9NS40 1196 aa11.72□□□□□ -0.53
TPM3-217ENST00000504663 CTAGE5O15320 804 aa11.71□□□□□ -0.53
TPM3-217ENST00000504663 ATP9AO75110 1047 aa11.71□□□□□ -0.53
TPM3-217ENST00000504663 MED24O75448 989 aa11.71□□□□□ -0.53
TPM3-217ENST00000504663 SLFN14P0C7P3 912 aa11.71□□□□□ -0.53
TPM3-217ENST00000504663 SPATA31C1P0DKV0 1188 aa11.71□□□□□ -0.53
TPM3-217ENST00000504663 KCNA2P16389 499 aa11.71□□□□□ -0.53
TPM3-217ENST00000504663 CASP1P29466 404 aa11.71□□□□□ -0.53
TPM3-217ENST00000504663 CCND2P30279 289 aa11.71□□□□□ -0.53
TPM3-217ENST00000504663 TM4SF4P48230 202 aa11.71□□□□□ -0.53
TPM3-217ENST00000504663 SARSP49591 514 aaKnown RBP11.71□□□□□ -0.53
TPM3-217ENST00000504663 ARHGEF16Q5VV41 709 aa11.71□□□□□ -0.53
TPM3-217ENST00000504663 CYP4F22Q6NT55 531 aa11.71□□□□□ -0.53
TPM3-217ENST00000504663 C17orf99Q6UX52 265 aa11.71□□□□□ -0.53
TPM3-217ENST00000504663 ANKRD35Q8N283 1001 aa11.71□□□□□ -0.53
TPM3-217ENST00000504663 GPRC5AQ8NFJ5 357 aa11.71□□□□□ -0.53
TPM3-217ENST00000504663 NSUN6Q8TEA1 469 aaKnown RBP11.71□□□□□ -0.53
TPM3-217ENST00000504663 GPRASP2Q96D09 838 aa11.71□□□□□ -0.53
TPM3-217ENST00000504663 PAGE5Q96GU1 130 aa11.71□□□□□ -0.53
TPM3-217ENST00000504663 UNC45AQ9H3U1 944 aa11.71□□□□□ -0.53
TPM3-217ENST00000504663 WDR70Q9NW82 654 aa11.71□□□□□ -0.53
TPM3-217ENST00000504663 KIAA1468Q9P260 1216 aa11.71□□□□□ -0.53
TPM3-217ENST00000504663 LRWD1Q9UFC0 647 aa11.71□□□□□ -0.53
TPM3-217ENST00000504663 PCDHA12Q9UN75 941 aa11.71□□□□□ -0.53
TPM3-217ENST00000504663 TELO2Q9Y4R8 837 aa11.71□□□□□ -0.53
TPM3-217ENST00000504663 LOXHD1Q8IVV2 1947 aa11.7□□□□□ -0.54
TPM3-217ENST00000504663 POTEB2H3BUK9 544 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms