RNA–Protein interactions for RNA: ENST00000504431.1

UBE2B-204, Transcript of ubiquitin conjugating enzyme E2 B, humanhuman

TSL 2

Gene UBE2B, Length 235 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2B-204ENST00000504431 ANKS3Q6ZW76 656 aa9.49□□□□□ -0.89
UBE2B-204ENST00000504431 COPS6Q7L5N1 327 aa9.49□□□□□ -0.89
UBE2B-204ENST00000504431 LRP10Q7Z4F1 713 aa9.49□□□□□ -0.89
UBE2B-204ENST00000504431 NLGN1Q8N2Q7 840 aa9.49□□□□□ -0.89
UBE2B-204ENST00000504431 FAM169BQ8N8A8 192 aa9.49□□□□□ -0.89
UBE2B-204ENST00000504431 RIN3Q8TB24 985 aa9.49□□□□□ -0.89
UBE2B-204ENST00000504431 SLC6A18Q96N87 628 aa9.49□□□□□ -0.89
UBE2B-204ENST00000504431 SYT17Q9BSW7 474 aa9.49□□□□□ -0.89
UBE2B-204ENST00000504431 COL24A1Q17RW2 1714 aa9.48□□□□□ -0.89
UBE2B-204ENST00000504431 A0A087WZG4 1122 aa9.48□□□□□ -0.89
UBE2B-204ENST00000504431 ZNF865P0CJ78 1059 aaPredicted RBP9.48□□□□□ -0.89
UBE2B-204ENST00000504431 FOSL1P15407 271 aa9.48□□□□□ -0.89
UBE2B-204ENST00000504431 GPTP24298 496 aa9.48□□□□□ -0.89
UBE2B-204ENST00000504431 TM4SF1P30408 202 aa9.48□□□□□ -0.89
UBE2B-204ENST00000504431 FAM214BQ7L5A3 538 aa9.48□□□□□ -0.89
UBE2B-204ENST00000504431 G2E3Q7L622 706 aa9.48□□□□□ -0.89
UBE2B-204ENST00000504431 SHISA5Q8N114 240 aa9.48□□□□□ -0.89
UBE2B-204ENST00000504431 MFSD4AQ8N468 514 aa9.48□□□□□ -0.89
UBE2B-204ENST00000504431 FBXL18Q96ME1 805 aa9.48□□□□□ -0.89
UBE2B-204ENST00000504431 LRRC4CQ9HCJ2 640 aa9.48□□□□□ -0.89
UBE2B-204ENST00000504431 SUCOQ9UBS9 1254 aaKnown RBP9.48□□□□□ -0.89
UBE2B-204ENST00000504431 IL16Q14005 1332 aa9.48□□□□□ -0.89
UBE2B-204ENST00000504431 POLRMTO00411 1230 aaKnown RBP9.47□□□□□ -0.89
UBE2B-204ENST00000504431 VAMP4O75379 141 aa9.47□□□□□ -0.89
UBE2B-204ENST00000504431 PMS1P54277 932 aaKnown RBP9.47□□□□□ -0.89
UBE2B-204ENST00000504431 SLFN5Q08AF3 891 aa9.47□□□□□ -0.89
UBE2B-204ENST00000504431 FXNQ16595 210 aa9.47□□□□□ -0.89
UBE2B-204ENST00000504431 PIWIL2Q8TC59 973 aaKnown RBP9.47□□□□□ -0.89
UBE2B-204ENST00000504431 DHX38Q92620 1227 aaKnown RBP9.47□□□□□ -0.89
UBE2B-204ENST00000504431 TRIM55Q9BYV6 548 aa9.47□□□□□ -0.89
UBE2B-204ENST00000504431 DDX21Q9NR30 783 aaKnown RBP eCLIP9.47□□□□□ -0.89
UBE2B-204ENST00000504431 RNF112Q9ULX5 631 aa9.47□□□□□ -0.89
UBE2B-204ENST00000504431 NUP98P52948 1817 aa9.47□□□□□ -0.89
UBE2B-204ENST00000504431 AFDNP55196 1824 aaKnown RBP9.47□□□□□ -0.89
UBE2B-204ENST00000504431 PRR19A6NJB7 356 aa9.46□□□□□ -0.9
UBE2B-204ENST00000504431 FAM155AB1AL88 458 aaPredicted RBP9.46□□□□□ -0.9
UBE2B-204ENST00000504431 SERPINB2P05120 415 aa9.46□□□□□ -0.9
UBE2B-204ENST00000504431 CEACAM5P06731 702 aa9.46□□□□□ -0.9
UBE2B-204ENST00000504431 KIF6Q6ZMV9 814 aa9.46□□□□□ -0.9
UBE2B-204ENST00000504431 HEXIM2Q96MH2 286 aaKnown RBP9.46□□□□□ -0.9
UBE2B-204ENST00000504431 YTHDC1Q96MU7 727 aaKnown RBP9.46□□□□□ -0.9
UBE2B-204ENST00000504431 MKRN2Q9H000 416 aaKnown RBP9.46□□□□□ -0.9
UBE2B-204ENST00000504431 MYH16Q9H6N6 1097 aa9.46□□□□□ -0.9
UBE2B-204ENST00000504431 DBF4Q9UBU7 674 aaPredicted RBP9.46□□□□□ -0.9
UBE2B-204ENST00000504431 ZNF214Q9UL59 606 aaPredicted RBP9.46□□□□□ -0.9
UBE2B-204ENST00000504431 NIP7Q9Y221 180 aaKnown RBP eCLIP9.46□□□□□ -0.9
UBE2B-204ENST00000504431 BCORQ6W2J9 1755 aa9.45□□□□□ -0.9
UBE2B-204ENST00000504431 N4BP2Q86UW6 1770 aaPredicted RBP9.45□□□□□ -0.9
UBE2B-204ENST00000504431 A0A0G2JLW4 131 aa9.45□□□□□ -0.9
UBE2B-204ENST00000504431 FAM86C2PA6NEL3 165 aa9.45□□□□□ -0.9
UBE2B-204ENST00000504431 CBX7O95931 251 aa9.45□□□□□ -0.9
UBE2B-204ENST00000504431 CHRNA5P30532 468 aa9.45□□□□□ -0.9
UBE2B-204ENST00000504431 OXCT1P55809 520 aa9.45□□□□□ -0.9
UBE2B-204ENST00000504431 RBL2Q08999 1139 aa9.45□□□□□ -0.9
UBE2B-204ENST00000504431 NCAPHQ15003 741 aa9.45□□□□□ -0.9
UBE2B-204ENST00000504431 ZYXQ15942 572 aaKnown RBP9.45□□□□□ -0.9
UBE2B-204ENST00000504431 NBPF12Q5TAG4 269 aaPredicted RBP9.45□□□□□ -0.9
UBE2B-204ENST00000504431 TMEM192Q8IY95 271 aa9.45□□□□□ -0.9
UBE2B-204ENST00000504431 HNRNPLLQ8WVV9 542 aaKnown RBP9.45□□□□□ -0.9
UBE2B-204ENST00000504431 MAP3K15Q6ZN16 1313 aa9.45□□□□□ -0.9
UBE2B-204ENST00000504431 CARMIL3Q8ND23 1372 aa9.45□□□□□ -0.9
UBE2B-204ENST00000504431 SCN7AQ01118 1682 aa9.45□□□□□ -0.9
UBE2B-204ENST00000504431 COBLO75128 1261 aa9.44□□□□□ -0.9
UBE2B-204ENST00000504431 TGFB1P01137 390 aa9.44□□□□□ -0.9
UBE2B-204ENST00000504431 HOXB7P09629 217 aa9.44□□□□□ -0.9
UBE2B-204ENST00000504431 NAT2P11245 290 aa9.44□□□□□ -0.9
UBE2B-204ENST00000504431 DPEP1P16444 411 aa9.44□□□□□ -0.9
UBE2B-204ENST00000504431 CLCN7P51798 805 aa9.44□□□□□ -0.9
UBE2B-204ENST00000504431 SLC7A5Q01650 507 aa9.44□□□□□ -0.9
UBE2B-204ENST00000504431 IFI16Q16666 785 aaKnown RBP9.44□□□□□ -0.9
UBE2B-204ENST00000504431 CCDC30Q5VVM6 783 aa9.44□□□□□ -0.9
UBE2B-204ENST00000504431 LARP1BQ659C4 914 aaKnown RBP9.44□□□□□ -0.9
UBE2B-204ENST00000504431 SYNE4Q8N205 404 aa9.44□□□□□ -0.9
UBE2B-204ENST00000504431 NETO1Q8TDF5 533 aa9.44□□□□□ -0.9
UBE2B-204ENST00000504431 ASCC2Q9H1I8 757 aaPredicted RBP9.44□□□□□ -0.9
UBE2B-204ENST00000504431 UBN2Q6ZU65 1347 aa9.43□□□□□ -0.9
UBE2B-204ENST00000504431 NPHP1O15259 732 aa9.43□□□□□ -0.9
UBE2B-204ENST00000504431 ITIH2P19823 946 aa9.43□□□□□ -0.9
UBE2B-204ENST00000504431 GNPTABQ3T906 1256 aa9.43□□□□□ -0.9
UBE2B-204ENST00000504431 SUSD4Q5VX71 490 aa9.43□□□□□ -0.9
UBE2B-204ENST00000504431 PRR5LQ6MZQ0 368 aa9.43□□□□□ -0.9
UBE2B-204ENST00000504431 VHLLQ6RSH7 139 aa9.43□□□□□ -0.9
UBE2B-204ENST00000504431 NBPF5PQ86XG9 351 aaPredicted RBP9.43□□□□□ -0.9
UBE2B-204ENST00000504431 CCDC144CPQ8IYA2 1237 aa9.43□□□□□ -0.9
UBE2B-204ENST00000504431 VWCEQ96DN2 955 aa9.43□□□□□ -0.9
UBE2B-204ENST00000504431 TNKS2Q9H2K2 1166 aa9.43□□□□□ -0.9
UBE2B-204ENST00000504431 HYPKQ9NX55 129 aa9.43□□□□□ -0.9
UBE2B-204ENST00000504431 SNX11Q9Y5W9 270 aa9.43□□□□□ -0.9
UBE2B-204ENST00000504431 CAPN6Q9Y6Q1 641 aa9.43□□□□□ -0.9
UBE2B-204ENST00000504431 LTBP3Q9NS15 1303 aa9.42□□□□□ -0.9
UBE2B-204ENST00000504431 TMEM265A0A087WTH1 108 aa9.42□□□□□ -0.9
UBE2B-204ENST00000504431 ERVV-1B6SEH8 477 aa9.42□□□□□ -0.9
UBE2B-204ENST00000504431 KLF4O43474 513 aa9.42□□□□□ -0.9
UBE2B-204ENST00000504431 ADAM23O75077 832 aa9.42□□□□□ -0.9
UBE2B-204ENST00000504431 RAB33AQ14088 237 aa9.42□□□□□ -0.9
UBE2B-204ENST00000504431 ZNF34Q8IZ26 560 aa9.42□□□□□ -0.9
UBE2B-204ENST00000504431 TRMT2AQ8IZ69 625 aaKnown RBP9.42□□□□□ -0.9
UBE2B-204ENST00000504431 FAM181AQ8N9Y4 354 aa9.42□□□□□ -0.9
UBE2B-204ENST00000504431 DTWD2Q8NBA8 298 aa9.42□□□□□ -0.9
UBE2B-204ENST00000504431 MISP3Q96FF7 219 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms