RNA–Protein interactions for RNA: ENST00000503982.1

LSM6-203, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM6, Length 820 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-203ENST00000503982 CCDC82Q8N4S0 544 aa25.43■■□□□ 1.66
LSM6-203ENST00000503982 CDC45O75419 566 aa25.42■■□□□ 1.66
LSM6-203ENST00000503982 RGS20O76081 388 aa25.42■■□□□ 1.66
LSM6-203ENST00000503982 RFC2P35250 354 aa25.42■■□□□ 1.66
LSM6-203ENST00000503982 LIFRP42702 1097 aa25.42■■□□□ 1.66
LSM6-203ENST00000503982 GRIN2CQ14957 1233 aa25.42■■□□□ 1.66
LSM6-203ENST00000503982 CELF3Q5SZQ8 465 aaKnown RBP25.42■■□□□ 1.66
LSM6-203ENST00000503982 MICU3Q86XE3 530 aa25.42■■□□□ 1.66
LSM6-203ENST00000503982 SRBD1Q8N5C6 995 aaKnown RBP25.42■■□□□ 1.66
LSM6-203ENST00000503982 KAT2BQ92831 832 aa25.42■■□□□ 1.66
LSM6-203ENST00000503982 EMID1Q96A84 441 aaPredicted RBP25.42■■□□□ 1.66
LSM6-203ENST00000503982 NKX2-4Q9H2Z4 354 aa25.42■■□□□ 1.66
LSM6-203ENST00000503982 RTEL1Q9NZ71 1219 aa25.42■■□□□ 1.66
LSM6-203ENST00000503982 MYO9BQ13459 2157 aa25.41■■□□□ 1.66
LSM6-203ENST00000503982 PITPNM1O00562 1244 aa25.41■■□□□ 1.66
LSM6-203ENST00000503982 UBA1P22314 1058 aaKnown RBP25.41■■□□□ 1.66
LSM6-203ENST00000503982 KIAA0753Q2KHM9 967 aa25.41■■□□□ 1.66
LSM6-203ENST00000503982 GPKOWQ92917 476 aaPredicted RBP eCLIP25.41■■□□□ 1.66
LSM6-203ENST00000503982 GAS2L1Q99501 681 aaPredicted RBP25.41■■□□□ 1.66
LSM6-203ENST00000503982 SLC28A3Q9HAS3 691 aa25.41■■□□□ 1.66
LSM6-203ENST00000503982 HDAC6Q9UBN7 1215 aa25.41■■□□□ 1.66
LSM6-203ENST00000503982 NOP56O00567 594 aaKnown RBP25.4■■□□□ 1.66
LSM6-203ENST00000503982 IQCF3P0C7M6 154 aa25.4■■□□□ 1.66
LSM6-203ENST00000503982 SMARCA1P28370 1054 aa25.4■■□□□ 1.66
LSM6-203ENST00000503982 MYSM1Q5VVJ2 828 aa25.4■■□□□ 1.66
LSM6-203ENST00000503982 USP17L6PQ6QN14 398 aa25.4■■□□□ 1.66
LSM6-203ENST00000503982 PHF6Q8IWS0 365 aaKnown RBP eCLIP25.4■■□□□ 1.66
LSM6-203ENST00000503982 NEK1Q96PY6 1258 aa25.4■■□□□ 1.66
LSM6-203ENST00000503982 hCG_1642624A0A1W2PR95 340 aa25.39■■□□□ 1.66
LSM6-203ENST00000503982 TGFB3P10600 412 aa25.39■■□□□ 1.66
LSM6-203ENST00000503982 RABGGTBP53611 331 aa25.39■■□□□ 1.66
LSM6-203ENST00000503982 HSDL1Q3SXM5 330 aa25.39■■□□□ 1.66
LSM6-203ENST00000503982 CAGE1Q8TC20 777 aa25.39■■□□□ 1.66
LSM6-203ENST00000503982 GTF2IRD1Q9UHL9 959 aa25.39■■□□□ 1.66
LSM6-203ENST00000503982 NAP1L2Q9ULW6 460 aaPredicted RBP25.39■■□□□ 1.66
LSM6-203ENST00000503982 STAM2O75886 525 aa25.38■■□□□ 1.65
LSM6-203ENST00000503982 ATP2A2P16615 1042 aaKnown RBP25.38■■□□□ 1.65
LSM6-203ENST00000503982 SP2Q02086 613 aa25.38■■□□□ 1.65
LSM6-203ENST00000503982 COL9A3Q14050 684 aaPredicted RBP25.38■■□□□ 1.65
LSM6-203ENST00000503982 SESTD1Q86VW0 696 aa25.38■■□□□ 1.65
LSM6-203ENST00000503982 FANCBQ8NB91 859 aa25.38■■□□□ 1.65
LSM6-203ENST00000503982 TCEANC2Q96MN5 208 aa25.38■■□□□ 1.65
LSM6-203ENST00000503982 PRDM12Q9H4Q4 367 aa25.38■■□□□ 1.65
LSM6-203ENST00000503982 PPFIA4O75335 1185 aa25.37■■□□□ 1.65
LSM6-203ENST00000503982 F2P00734 622 aa25.37■■□□□ 1.65
LSM6-203ENST00000503982 FGD1P98174 961 aa25.37■■□□□ 1.65
LSM6-203ENST00000503982 HEATR3Q7Z4Q2 680 aa25.37■■□□□ 1.65
LSM6-203ENST00000503982 AFAP1L1Q8TED9 768 aa25.37■■□□□ 1.65
LSM6-203ENST00000503982 PSTPIP2Q9H939 334 aa25.37■■□□□ 1.65
LSM6-203ENST00000503982 MRPS9P82933 396 aaKnown RBP25.36■■□□□ 1.65
LSM6-203ENST00000503982 SP4Q02446 784 aa25.36■■□□□ 1.65
LSM6-203ENST00000503982 NEDD9Q14511 834 aa25.36■■□□□ 1.65
LSM6-203ENST00000503982 TMTC3Q6ZXV5 915 aa25.36■■□□□ 1.65
LSM6-203ENST00000503982 CYFIP1Q7L576 1253 aa25.36■■□□□ 1.65
LSM6-203ENST00000503982 NLRX1Q86UT6 975 aa25.36■■□□□ 1.65
LSM6-203ENST00000503982 PPM1EQ8WY54 764 aa25.36■■□□□ 1.65
LSM6-203ENST00000503982 FIBPO43427 364 aa25.35■■□□□ 1.65
LSM6-203ENST00000503982 SELPP16109 830 aa25.35■■□□□ 1.65
LSM6-203ENST00000503982 KRT32Q14532 448 aa25.35■■□□□ 1.65
LSM6-203ENST00000503982 PPP2R2DQ66LE6 453 aa25.35■■□□□ 1.65
LSM6-203ENST00000503982 LRRC8DQ7L1W4 858 aa25.35■■□□□ 1.65
LSM6-203ENST00000503982 TET1Q8NFU7 2136 aa25.35■■□□□ 1.65
LSM6-203ENST00000503982 RBM28Q9NW13 759 aaKnown RBP25.35■■□□□ 1.65
LSM6-203ENST00000503982 YBX2Q9Y2T7 364 aaKnown RBP25.35■■□□□ 1.65
LSM6-203ENST00000503982 FRMPD4Q14CM0 1322 aa25.35■■□□□ 1.65
LSM6-203ENST00000503982 SPDYE3A6NKU9 549 aa25.34■■□□□ 1.65
LSM6-203ENST00000503982 MEIS2O14770 477 aa25.34■■□□□ 1.65
LSM6-203ENST00000503982 IGFBP4P22692 258 aa25.34■■□□□ 1.65
LSM6-203ENST00000503982 KCNJ6P48051 423 aa25.34■■□□□ 1.65
LSM6-203ENST00000503982 PTK7Q13308 1070 aa25.34■■□□□ 1.65
LSM6-203ENST00000503982 UBE2SQ16763 222 aa25.34■■□□□ 1.65
LSM6-203ENST00000503982 PCNX4Q63HM2 1172 aa25.34■■□□□ 1.65
LSM6-203ENST00000503982 DHX32Q7L7V1 743 aaKnown RBP25.34■■□□□ 1.65
LSM6-203ENST00000503982 DHX38Q92620 1227 aaKnown RBP25.34■■□□□ 1.65
LSM6-203ENST00000503982 INPP4AQ96PE3 977 aaPredicted RBP25.34■■□□□ 1.65
LSM6-203ENST00000503982 PCDHA11Q9Y5I1 949 aa25.34■■□□□ 1.65
LSM6-203ENST00000503982 KAT6AQ92794 2004 aa25.34■■□□□ 1.65
LSM6-203ENST00000503982 HAS3O00219 553 aa25.33■■□□□ 1.65
LSM6-203ENST00000503982 PIK3CDO00329 1044 aa25.33■■□□□ 1.65
LSM6-203ENST00000503982 ZBTB43O43298 467 aa25.33■■□□□ 1.65
LSM6-203ENST00000503982 MYOGP15173 224 aa25.33■■□□□ 1.65
LSM6-203ENST00000503982 ZNF200P98182 395 aaPredicted RBP25.33■■□□□ 1.65
LSM6-203ENST00000503982 RTN1Q16799 776 aa25.33■■□□□ 1.65
LSM6-203ENST00000503982 UTP14CQ5TAP6 766 aaKnown RBP25.33■■□□□ 1.65
LSM6-203ENST00000503982 SGMS1Q86VZ5 419 aa25.33■■□□□ 1.65
LSM6-203ENST00000503982 VWCEQ96DN2 955 aa25.33■■□□□ 1.65
LSM6-203ENST00000503982 SLC9A7Q96T83 725 aa25.33■■□□□ 1.65
LSM6-203ENST00000503982 BCAS3Q9H6U6 928 aa25.33■■□□□ 1.65
LSM6-203ENST00000503982 EHMT1Q9H9B1 1298 aa25.33■■□□□ 1.65
LSM6-203ENST00000503982 C17orf102A2RUQ5 167 aa25.32■■□□□ 1.64
LSM6-203ENST00000503982 GOLGA8AA7E2F4 631 aa25.32■■□□□ 1.64
LSM6-203ENST00000503982 GOLGA8BA8MQT2 603 aa25.32■■□□□ 1.64
LSM6-203ENST00000503982 LGALS2P05162 132 aa25.32■■□□□ 1.64
LSM6-203ENST00000503982 CKBP12277 381 aa25.32■■□□□ 1.64
LSM6-203ENST00000503982 ICAM3P32942 547 aa25.32■■□□□ 1.64
LSM6-203ENST00000503982 XRRA1Q6P2D8 792 aa25.32■■□□□ 1.64
LSM6-203ENST00000503982 APOA5Q6Q788 366 aa25.32■■□□□ 1.64
LSM6-203ENST00000503982 METTL7BQ6UX53 244 aa25.32■■□□□ 1.64
LSM6-203ENST00000503982 KLF18A0A0U1RQI7 1052 aa25.31■■□□□ 1.64
LSM6-203ENST00000503982 SPATA31C2B4DYI2 1134 aa25.31■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms