RNA–Protein interactions for RNA: ENST00000503742.5

UBE2D3-216, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 1 (best)

Gene UBE2D3, Length 1,977 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-216ENST00000503742 SCYL3Q8IZE3 742 aa23.83■■□□□ 1.41
UBE2D3-216ENST00000503742 GPC2Q8N158 579 aa23.83■■□□□ 1.41
UBE2D3-216ENST00000503742 ERMNQ8TAM6 284 aa23.83■■□□□ 1.41
UBE2D3-216ENST00000503742 HOOK2Q96ED9 719 aa23.83■■□□□ 1.41
UBE2D3-216ENST00000503742 PRIMPOLQ96LW4 560 aa23.83■■□□□ 1.41
UBE2D3-216ENST00000503742 C16orf45Q96MC5 204 aaPredicted RBP23.83■■□□□ 1.41
UBE2D3-216ENST00000503742 TAB2Q9NYJ8 693 aa23.83■■□□□ 1.41
UBE2D3-216ENST00000503742 PLA2G4BP0C869 781 aa23.82■■□□□ 1.4
UBE2D3-216ENST00000503742 SPATA31C1P0DKV0 1188 aa23.82■■□□□ 1.4
UBE2D3-216ENST00000503742 USP14P54578 494 aa23.82■■□□□ 1.4
UBE2D3-216ENST00000503742 GHRHRQ02643 423 aa23.82■■□□□ 1.4
UBE2D3-216ENST00000503742 CENPPQ6IPU0 288 aa23.82■■□□□ 1.4
UBE2D3-216ENST00000503742 NYAP1Q6ZVC0 841 aa23.82■■□□□ 1.4
UBE2D3-216ENST00000503742 VPS16Q9H269 839 aa23.82■■□□□ 1.4
UBE2D3-216ENST00000503742 SLC38A10Q9HBR0 1119 aa23.82■■□□□ 1.4
UBE2D3-216ENST00000503742 SBF1O95248 1867 aa23.82■■□□□ 1.4
UBE2D3-216ENST00000503742 VCAM1P19320 739 aa23.82■■□□□ 1.4
UBE2D3-216ENST00000503742 MTMR2Q13614 643 aa23.82■■□□□ 1.4
UBE2D3-216ENST00000503742 NCAPH2Q6IBW4 605 aa23.82■■□□□ 1.4
UBE2D3-216ENST00000503742 GUF1Q8N442 669 aaKnown RBP23.82■■□□□ 1.4
UBE2D3-216ENST00000503742 CLEC4DQ8WXI8 215 aa23.82■■□□□ 1.4
UBE2D3-216ENST00000503742 SEMA6BQ9H3T3 888 aa23.82■■□□□ 1.4
UBE2D3-216ENST00000503742 RRP9O43818 475 aaKnown RBP23.81■■□□□ 1.4
UBE2D3-216ENST00000503742 ADKP55263 362 aaKnown RBP23.81■■□□□ 1.4
UBE2D3-216ENST00000503742 ARHGAP27Q6ZUM4 889 aa23.81■■□□□ 1.4
UBE2D3-216ENST00000503742 CSGALNACT2Q8N6G5 542 aa23.81■■□□□ 1.4
UBE2D3-216ENST00000503742 PARP14Q460N5 1801 aa23.8■■□□□ 1.4
UBE2D3-216ENST00000503742 POTEFA5A3E0 1075 aa23.8■■□□□ 1.4
UBE2D3-216ENST00000503742 POTEIP0CG38 1075 aa23.8■■□□□ 1.4
UBE2D3-216ENST00000503742 TNNT1P13805 278 aa23.8■■□□□ 1.4
UBE2D3-216ENST00000503742 IDEP14735 1019 aa23.8■■□□□ 1.4
UBE2D3-216ENST00000503742 SLC12A3P55017 1021 aa23.8■■□□□ 1.4
UBE2D3-216ENST00000503742 POTEGQ6S5H5 508 aa23.8■■□□□ 1.4
UBE2D3-216ENST00000503742 POTEEQ6S8J3 1075 aa23.8■■□□□ 1.4
UBE2D3-216ENST00000503742 BMP2KQ9NSY1 1161 aaPredicted RBP23.8■■□□□ 1.4
UBE2D3-216ENST00000503742 TRMT1Q9NXH9 659 aaKnown RBP23.8■■□□□ 1.4
UBE2D3-216ENST00000503742 PPP1R9AQ9ULJ8 1098 aa23.8■■□□□ 1.4
UBE2D3-216ENST00000503742 CYP11B2P19099 503 aa23.8■■□□□ 1.4
UBE2D3-216ENST00000503742 HIRAP54198 1017 aaPredicted RBP23.8■■□□□ 1.4
UBE2D3-216ENST00000503742 BACE1P56817 501 aa23.8■■□□□ 1.4
UBE2D3-216ENST00000503742 COASYQ13057 564 aa23.8■■□□□ 1.4
UBE2D3-216ENST00000503742 SPP2Q13103 211 aa23.8■■□□□ 1.4
UBE2D3-216ENST00000503742 PRAMEF18Q5VWM3 479 aa23.8■■□□□ 1.4
UBE2D3-216ENST00000503742 SLC5A5Q92911 643 aa23.8■■□□□ 1.4
UBE2D3-216ENST00000503742 POLR3CQ9BUI4 534 aaPredicted RBP23.8■■□□□ 1.4
UBE2D3-216ENST00000503742 TANGO6Q9C0B7 1094 aa23.8■■□□□ 1.4
UBE2D3-216ENST00000503742 UTRNP46939 3433 aa23.79■■□□□ 1.4
UBE2D3-216ENST00000503742 AKR1B15C9JRZ8 316 aaPredicted RBP23.79■■□□□ 1.4
UBE2D3-216ENST00000503742 ARHGAP6O43182 974 aa23.79■■□□□ 1.4
UBE2D3-216ENST00000503742 STX10O60499 249 aa23.79■■□□□ 1.4
UBE2D3-216ENST00000503742 PSMD10O75832 226 aa23.79■■□□□ 1.4
UBE2D3-216ENST00000503742 PTPRAP18433 802 aa23.79■■□□□ 1.4
UBE2D3-216ENST00000503742 RBL2Q08999 1139 aa23.79■■□□□ 1.4
UBE2D3-216ENST00000503742 CEP55Q53EZ4 464 aa23.79■■□□□ 1.4
UBE2D3-216ENST00000503742 ZKSCAN4Q969J2 545 aaPredicted RBP23.79■■□□□ 1.4
UBE2D3-216ENST00000503742 WRNIP1Q96S55 665 aa23.79■■□□□ 1.4
UBE2D3-216ENST00000503742 BAG1Q99933 345 aaPredicted RBP23.79■■□□□ 1.4
UBE2D3-216ENST00000503742 PPP2R3BQ9Y5P8 575 aa23.79■■□□□ 1.4
UBE2D3-216ENST00000503742 RPTORQ8N122 1335 aa23.79■■□□□ 1.4
UBE2D3-216ENST00000503742 FLOT1O75955 427 aa23.78■■□□□ 1.4
UBE2D3-216ENST00000503742 EPS15P42566 896 aa23.78■■□□□ 1.4
UBE2D3-216ENST00000503742 CEP135Q66GS9 1140 aa23.78■■□□□ 1.4
UBE2D3-216ENST00000503742 FOXR2Q6PJQ5 311 aa23.78■■□□□ 1.4
UBE2D3-216ENST00000503742 OTOP1Q7RTM1 612 aa23.78■■□□□ 1.4
UBE2D3-216ENST00000503742 GPBP1Q86WP2 473 aa23.78■■□□□ 1.4
UBE2D3-216ENST00000503742 UBE2Q2Q8WVN8 375 aa23.78■■□□□ 1.4
UBE2D3-216ENST00000503742 PANX2Q96RD6 677 aa23.78■■□□□ 1.4
UBE2D3-216ENST00000503742 RPAP3Q9H6T3 665 aaPredicted RBP23.78■■□□□ 1.4
UBE2D3-216ENST00000503742 AS3MTQ9HBK9 375 aa23.78■■□□□ 1.4
UBE2D3-216ENST00000503742 PANK4Q9NVE7 773 aa23.78■■□□□ 1.4
UBE2D3-216ENST00000503742 GGA3Q9NZ52 723 aa23.78■■□□□ 1.4
UBE2D3-216ENST00000503742 RABGAP1Q9Y3P9 1069 aa23.78■■□□□ 1.4
UBE2D3-216ENST00000503742 PHIPQ8WWQ0 1821 aa23.78■■□□□ 1.4
UBE2D3-216ENST00000503742 LGALS16A8MUM7 142 aa23.78■■□□□ 1.4
UBE2D3-216ENST00000503742 EML1O00423 815 aa23.78■■□□□ 1.4
UBE2D3-216ENST00000503742 MEIS1O00470 390 aa23.78■■□□□ 1.4
UBE2D3-216ENST00000503742 NFIBO00712 420 aa23.78■■□□□ 1.4
UBE2D3-216ENST00000503742 SSBP05455 408 aaKnown RBP eCLIP23.78■■□□□ 1.4
UBE2D3-216ENST00000503742 UBXN2AP68543 259 aa23.78■■□□□ 1.4
UBE2D3-216ENST00000503742 PPP2R5CQ13362 524 aa23.78■■□□□ 1.4
UBE2D3-216ENST00000503742 ARSHQ5FYA8 562 aa23.78■■□□□ 1.4
UBE2D3-216ENST00000503742 PPFIBP1Q86W92 1011 aa23.78■■□□□ 1.4
UBE2D3-216ENST00000503742 KCTD17Q8N5Z5 321 aa23.78■■□□□ 1.4
UBE2D3-216ENST00000503742 ZNF280CQ8ND82 737 aa23.78■■□□□ 1.4
UBE2D3-216ENST00000503742 ZNF507Q8TCN5 953 aa23.78■■□□□ 1.4
UBE2D3-216ENST00000503742 PPP1R13BQ96KQ4 1090 aa23.78■■□□□ 1.4
UBE2D3-216ENST00000503742 SPON1Q9HCB6 807 aa23.78■■□□□ 1.4
UBE2D3-216ENST00000503742 COL20A1Q9P218 1284 aa23.78■■□□□ 1.4
UBE2D3-216ENST00000503742 MAGEC2Q9UBF1 373 aaPredicted RBP23.78■■□□□ 1.4
UBE2D3-216ENST00000503742 PITPNM2Q9BZ72 1349 aa23.77■■□□□ 1.4
UBE2D3-216ENST00000503742 RBBP6Q7Z6E9 1792 aaKnown RBP23.77■■□□□ 1.4
UBE2D3-216ENST00000503742 FRMD3A2A2Y4 597 aa23.77■■□□□ 1.4
UBE2D3-216ENST00000503742 GYPCP04921 128 aa23.77■■□□□ 1.4
UBE2D3-216ENST00000503742 PSMC6P62333 389 aa23.77■■□□□ 1.4
UBE2D3-216ENST00000503742 MCF2L2Q86YR7 1114 aa23.77■■□□□ 1.4
UBE2D3-216ENST00000503742 SYT2Q8N9I0 419 aaPredicted RBP23.77■■□□□ 1.4
UBE2D3-216ENST00000503742 EIF2AK1Q9BQI3 630 aaKnown RBP23.77■■□□□ 1.4
UBE2D3-216ENST00000503742 RAVER2Q9HCJ3 691 aaKnown RBP23.77■■□□□ 1.4
UBE2D3-216ENST00000503742 DNM3Q9UQ16 869 aa23.77■■□□□ 1.4
UBE2D3-216ENST00000503742 PCDHA2Q9Y5H9 948 aa23.77■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms