RNA–Protein interactions for RNA: ENST00000503682.5

COPS4-202, Transcript of COP9 signalosome subunit 4, humanhuman

TSL 5 BASIC

Gene COPS4, Length 1,702 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS4-202ENST00000503682 HEATR3Q7Z4Q2 680 aa11.75□□□□□ -0.53
COPS4-202ENST00000503682 TMEM199Q8N511 208 aa11.75□□□□□ -0.53
COPS4-202ENST00000503682 LZTS2Q9BRK4 669 aa11.75□□□□□ -0.53
COPS4-202ENST00000503682 ALG1Q9BT22 464 aa11.75□□□□□ -0.53
COPS4-202ENST00000503682 MAF1Q9H063 256 aa11.75□□□□□ -0.53
COPS4-202ENST00000503682 MTMR10Q9NXD2 777 aa11.75□□□□□ -0.53
COPS4-202ENST00000503682 MAP3K20Q9NYL2 800 aaKnown RBP11.75□□□□□ -0.53
COPS4-202ENST00000503682 MYO9BQ13459 2157 aa11.75□□□□□ -0.53
COPS4-202ENST00000503682 CNTNAP5Q8WYK1 1306 aa11.75□□□□□ -0.53
COPS4-202ENST00000503682 TANC1Q9C0D5 1861 aa11.75□□□□□ -0.53
COPS4-202ENST00000503682 ZBTB43O43298 467 aa11.74□□□□□ -0.53
COPS4-202ENST00000503682 SMARCA1P28370 1054 aa11.74□□□□□ -0.53
COPS4-202ENST00000503682 HSPA4P34932 840 aa11.74□□□□□ -0.53
COPS4-202ENST00000503682 SEMA3FQ13275 785 aa11.74□□□□□ -0.53
COPS4-202ENST00000503682 PPIGQ13427 754 aaKnown RBP eCLIP11.74□□□□□ -0.53
COPS4-202ENST00000503682 RTN1Q16799 776 aa11.74□□□□□ -0.53
COPS4-202ENST00000503682 MYSM1Q5VVJ2 828 aa11.74□□□□□ -0.53
COPS4-202ENST00000503682 GDF6Q6KF10 455 aaPredicted RBP11.74□□□□□ -0.53
COPS4-202ENST00000503682 TYW1BQ6NUM6 668 aa11.74□□□□□ -0.53
COPS4-202ENST00000503682 SYNE3Q6ZMZ3 975 aa11.74□□□□□ -0.53
COPS4-202ENST00000503682 OTOP2Q7RTS6 562 aa11.74□□□□□ -0.53
COPS4-202ENST00000503682 VWCEQ96DN2 955 aa11.74□□□□□ -0.53
COPS4-202ENST00000503682 PGBD1Q96JS3 809 aa11.74□□□□□ -0.53
COPS4-202ENST00000503682 FAM217BQ9NTX9 383 aaPredicted RBP11.74□□□□□ -0.53
COPS4-202ENST00000503682 CXXC1Q9P0U4 656 aaPredicted RBP11.74□□□□□ -0.53
COPS4-202ENST00000503682 PRUNE2Q8WUY3 3088 aa11.74□□□□□ -0.53
COPS4-202ENST00000503682 UNC80Q8N2C7 3258 aa11.74□□□□□ -0.53
COPS4-202ENST00000503682 GOLGA8AA7E2F4 631 aa11.74□□□□□ -0.53
COPS4-202ENST00000503682 GOLGA8BA8MQT2 603 aa11.74□□□□□ -0.53
COPS4-202ENST00000503682 CASTP20810 708 aaKnown RBP11.74□□□□□ -0.53
COPS4-202ENST00000503682 ADD1P35611 737 aaKnown RBP11.74□□□□□ -0.53
COPS4-202ENST00000503682 PBX2P40425 430 aa11.74□□□□□ -0.53
COPS4-202ENST00000503682 FGD1P98174 961 aa11.74□□□□□ -0.53
COPS4-202ENST00000503682 TRAF1Q13077 416 aa11.74□□□□□ -0.53
COPS4-202ENST00000503682 CELF3Q5SZQ8 465 aaKnown RBP11.74□□□□□ -0.53
COPS4-202ENST00000503682 WWC2Q6AWC2 1192 aa11.74□□□□□ -0.53
COPS4-202ENST00000503682 DEFB128Q7Z7B8 93 aa11.74□□□□□ -0.53
COPS4-202ENST00000503682 KCNB2Q92953 911 aa11.74□□□□□ -0.53
COPS4-202ENST00000503682 BRF1Q92994 677 aa11.74□□□□□ -0.53
COPS4-202ENST00000503682 SPATA33Q96N06 139 aa11.74□□□□□ -0.53
COPS4-202ENST00000503682 GUCD1Q96NT3 240 aa11.74□□□□□ -0.53
COPS4-202ENST00000503682 TTYH1Q9H313 450 aaPredicted RBP11.74□□□□□ -0.53
COPS4-202ENST00000503682 PSTPIP2Q9H939 334 aa11.74□□□□□ -0.53
COPS4-202ENST00000503682 IL23AQ9NPF7 189 aa11.74□□□□□ -0.53
COPS4-202ENST00000503682 HDAC6Q9UBN7 1215 aa11.74□□□□□ -0.53
COPS4-202ENST00000503682 V9GY48 417 aaPredicted RBP11.74□□□□□ -0.53
COPS4-202ENST00000503682 KPNA6O60684 536 aa11.73□□□□□ -0.53
COPS4-202ENST00000503682 PSEN2P49810 448 aa11.73□□□□□ -0.53
COPS4-202ENST00000503682 ZNF200P98182 395 aaPredicted RBP11.73□□□□□ -0.53
COPS4-202ENST00000503682 SP4Q02446 784 aa11.73□□□□□ -0.53
COPS4-202ENST00000503682 FUT2Q10981 343 aa11.73□□□□□ -0.53
COPS4-202ENST00000503682 LAMC2Q13753 1193 aa11.73□□□□□ -0.53
COPS4-202ENST00000503682 HIC1Q14526 733 aa11.73□□□□□ -0.53
COPS4-202ENST00000503682 KRT32Q14532 448 aa11.73□□□□□ -0.53
COPS4-202ENST00000503682 DGKDQ16760 1214 aa11.73□□□□□ -0.53
COPS4-202ENST00000503682 GPR153Q6NV75 609 aa11.73□□□□□ -0.53
COPS4-202ENST00000503682 SAMD3Q8N6K7 520 aa11.73□□□□□ -0.53
COPS4-202ENST00000503682 CUL5Q93034 780 aa11.73□□□□□ -0.53
COPS4-202ENST00000503682 CTAGE1Q96RT6 745 aa11.73□□□□□ -0.53
COPS4-202ENST00000503682 LARP6Q9BRS8 491 aaKnown RBP11.73□□□□□ -0.53
COPS4-202ENST00000503682 MLXIPQ9HAP2 919 aa11.73□□□□□ -0.53
COPS4-202ENST00000503682 PKD2L1Q9P0L9 805 aa11.73□□□□□ -0.53
COPS4-202ENST00000503682 FRMPD4Q14CM0 1322 aa11.73□□□□□ -0.53
COPS4-202ENST00000503682 KAT6AQ92794 2004 aa11.73□□□□□ -0.53
COPS4-202ENST00000503682 PTPRSQ13332 1948 aa11.72□□□□□ -0.53
COPS4-202ENST00000503682 ADAMTS3O15072 1205 aa11.72□□□□□ -0.53
COPS4-202ENST00000503682 PTGISQ16647 500 aa11.72□□□□□ -0.53
COPS4-202ENST00000503682 KIAA0753Q2KHM9 967 aa11.72□□□□□ -0.53
COPS4-202ENST00000503682 ZNF697Q5TEC3 545 aa11.72□□□□□ -0.53
COPS4-202ENST00000503682 NFRKBQ6P4R8 1299 aa11.72□□□□□ -0.53
COPS4-202ENST00000503682 BLOC1S2Q6QNY1 142 aa11.72□□□□□ -0.53
COPS4-202ENST00000503682 CYFIP1Q7L576 1253 aa11.72□□□□□ -0.53
COPS4-202ENST00000503682 PPTC7Q8NI37 304 aa11.72□□□□□ -0.53
COPS4-202ENST00000503682 EMID1Q96A84 441 aaPredicted RBP11.72□□□□□ -0.53
COPS4-202ENST00000503682 NOD1Q9Y239 953 aa11.72□□□□□ -0.53
COPS4-202ENST00000503682 PIK3CDO00329 1044 aa11.72□□□□□ -0.53
COPS4-202ENST00000503682 ATP9AO75110 1047 aa11.72□□□□□ -0.53
COPS4-202ENST00000503682 FGBP02675 491 aa11.72□□□□□ -0.53
COPS4-202ENST00000503682 SUPT20HL2P0C7V6 817 aa11.72□□□□□ -0.53
COPS4-202ENST00000503682 SMAD3P84022 425 aaKnown RBP11.72□□□□□ -0.53
COPS4-202ENST00000503682 MFSD10Q14728 455 aa11.72□□□□□ -0.53
COPS4-202ENST00000503682 WNT8BQ93098 351 aa11.72□□□□□ -0.53
COPS4-202ENST00000503682 INPP4AQ96PE3 977 aaPredicted RBP11.72□□□□□ -0.53
COPS4-202ENST00000503682 SEMA6BQ9H3T3 888 aa11.72□□□□□ -0.53
COPS4-202ENST00000503682 RBM28Q9NW13 759 aaKnown RBP11.72□□□□□ -0.53
COPS4-202ENST00000503682 TMEM260Q9NX78 707 aa11.72□□□□□ -0.53
COPS4-202ENST00000503682 PPP4R2Q9NY27 417 aa11.72□□□□□ -0.53
COPS4-202ENST00000503682 PCDHA6Q9UN73 950 aa11.72□□□□□ -0.53
COPS4-202ENST00000503682 PCDHA8Q9Y5H6 950 aa11.72□□□□□ -0.53
COPS4-202ENST00000503682 SPATA31C2B4DYI2 1134 aa11.71□□□□□ -0.54
COPS4-202ENST00000503682 DTNBO60941 627 aa11.71□□□□□ -0.54
COPS4-202ENST00000503682 F2P00734 622 aa11.71□□□□□ -0.54
COPS4-202ENST00000503682 CHRM1P11229 460 aaPredicted RBP11.71□□□□□ -0.54
COPS4-202ENST00000503682 RPS6KB1P23443 525 aa11.71□□□□□ -0.54
COPS4-202ENST00000503682 METAP2P50579 478 aaKnown RBP eCLIP11.71□□□□□ -0.54
COPS4-202ENST00000503682 NAPAP54920 295 aa11.71□□□□□ -0.54
COPS4-202ENST00000503682 RASIP1Q5U651 963 aa11.71□□□□□ -0.54
COPS4-202ENST00000503682 PCNX4Q63HM2 1172 aa11.71□□□□□ -0.54
COPS4-202ENST00000503682 PSRC1Q6PGN9 363 aaPredicted RBP11.71□□□□□ -0.54
COPS4-202ENST00000503682 TRIM50Q86XT4 487 aa11.71□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms