RNA–Protein interactions for RNA: ENST00000503401.1

SCLT1-205, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene SCLT1, Length 1,604 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-205ENST00000503401 PIK3AP1Q6ZUJ8 805 aa18.8■□□□□ 0.6
SCLT1-205ENST00000503401 ARRDC4Q8NCT1 418 aa18.8■□□□□ 0.6
SCLT1-205ENST00000503401 FBXO18Q8NFZ0 1043 aa18.8■□□□□ 0.6
SCLT1-205ENST00000503401 PAWRQ96IZ0 340 aaKnown RBP18.8■□□□□ 0.6
SCLT1-205ENST00000503401 UIMC1Q96RL1 719 aa18.8■□□□□ 0.6
SCLT1-205ENST00000503401 MXRA8Q9BRK3 442 aa18.8■□□□□ 0.6
SCLT1-205ENST00000503401 AP5M1Q9H0R1 490 aa18.8■□□□□ 0.6
SCLT1-205ENST00000503401 UPF3AQ9H1J1 476 aaKnown RBP18.8■□□□□ 0.6
SCLT1-205ENST00000503401 BRMS1Q9HCU9 246 aa18.8■□□□□ 0.6
SCLT1-205ENST00000503401 PKD2L1Q9P0L9 805 aa18.8■□□□□ 0.6
SCLT1-205ENST00000503401 CCDC194A0A1B0GVG4 234 aa18.79■□□□□ 0.6
SCLT1-205ENST00000503401 SPATA31C2B4DYI2 1134 aa18.79■□□□□ 0.6
SCLT1-205ENST00000503401 FIBPO43427 364 aa18.79■□□□□ 0.6
SCLT1-205ENST00000503401 MTMR1Q13613 665 aa18.79■□□□□ 0.6
SCLT1-205ENST00000503401 NONOQ15233 471 aaKnown RBP eCLIP18.79■□□□□ 0.6
SCLT1-205ENST00000503401 INF2Q27J81 1249 aa18.79■□□□□ 0.6
SCLT1-205ENST00000503401 CEP55Q53EZ4 464 aa18.79■□□□□ 0.6
SCLT1-205ENST00000503401 GNASQ5JWF2 1037 aa18.79■□□□□ 0.6
SCLT1-205ENST00000503401 RNF180Q86T96 592 aa18.79■□□□□ 0.6
SCLT1-205ENST00000503401 NLRX1Q86UT6 975 aa18.79■□□□□ 0.6
SCLT1-205ENST00000503401 SPC25Q9HBM1 224 aa18.79■□□□□ 0.6
SCLT1-205ENST00000503401 JADE2Q9NQC1 790 aa18.79■□□□□ 0.6
SCLT1-205ENST00000503401 DNM1LO00429 736 aa18.78■□□□□ 0.6
SCLT1-205ENST00000503401 ATP9AO75110 1047 aa18.78■□□□□ 0.6
SCLT1-205ENST00000503401 CYP3A4P08684 503 aa18.78■□□□□ 0.6
SCLT1-205ENST00000503401 ARP10275 920 aa18.78■□□□□ 0.6
SCLT1-205ENST00000503401 ICAM3P32942 547 aa18.78■□□□□ 0.6
SCLT1-205ENST00000503401 ARHGAP1Q07960 439 aa18.78■□□□□ 0.6
SCLT1-205ENST00000503401 FSCN1Q16658 493 aaKnown RBP18.78■□□□□ 0.6
SCLT1-205ENST00000503401 KRT25Q7Z3Z0 450 aa18.78■□□□□ 0.6
SCLT1-205ENST00000503401 ANKLE1Q8NAG6 615 aa18.78■□□□□ 0.6
SCLT1-205ENST00000503401 KLHDC9Q8NEP7 349 aa18.78■□□□□ 0.6
SCLT1-205ENST00000503401 TNFRSF25Q93038 417 aa18.78■□□□□ 0.6
SCLT1-205ENST00000503401 GPRASP2Q96D09 838 aa18.78■□□□□ 0.6
SCLT1-205ENST00000503401 KBTBD13C9JR72 458 aa18.78■□□□□ 0.6
SCLT1-205ENST00000503401 NKRFO15226 690 aaKnown RBP eCLIP18.78■□□□□ 0.6
SCLT1-205ENST00000503401 GGPS1O95749 300 aa18.78■□□□□ 0.6
SCLT1-205ENST00000503401 GH1P01241 217 aa18.78■□□□□ 0.6
SCLT1-205ENST00000503401 KCNA10Q16322 511 aa18.78■□□□□ 0.6
SCLT1-205ENST00000503401 KCNV1Q6PIU1 500 aa18.78■□□□□ 0.6
SCLT1-205ENST00000503401 UBE2Q1Q7Z7E8 422 aa18.78■□□□□ 0.6
SCLT1-205ENST00000503401 FERMT2Q96AC1 680 aa18.78■□□□□ 0.6
SCLT1-205ENST00000503401 KCNH7Q9NS40 1196 aa18.78■□□□□ 0.6
SCLT1-205ENST00000503401 Q9Y3F1 56 aa18.78■□□□□ 0.6
SCLT1-205ENST00000503401 MEIS1O00470 390 aa18.77■□□□□ 0.6
SCLT1-205ENST00000503401 TGFB3P10600 412 aa18.77■□□□□ 0.6
SCLT1-205ENST00000503401 SAFBQ15424 915 aaKnown RBP eCLIP18.77■□□□□ 0.6
SCLT1-205ENST00000503401 CELF3Q5SZQ8 465 aaKnown RBP18.77■□□□□ 0.6
SCLT1-205ENST00000503401 CCSAPQ6IQ19 270 aaPredicted RBP18.77■□□□□ 0.6
SCLT1-205ENST00000503401 DHX37Q8IY37 1157 aaKnown RBP18.77■□□□□ 0.6
SCLT1-205ENST00000503401 AFG1LQ8WV93 481 aa18.77■□□□□ 0.6
SCLT1-205ENST00000503401 KIF3AQ9Y496 699 aa18.77■□□□□ 0.6
SCLT1-205ENST00000503401 TELO2Q9Y4R8 837 aa18.77■□□□□ 0.6
SCLT1-205ENST00000503401 IGLV3-22A0A075B6J6 115 aa18.76■□□□□ 0.59
SCLT1-205ENST00000503401 TDP2O95551 362 aa18.76■□□□□ 0.59
SCLT1-205ENST00000503401 PRR16Q569H4 304 aa18.76■□□□□ 0.59
SCLT1-205ENST00000503401 MYSM1Q5VVJ2 828 aa18.76■□□□□ 0.59
SCLT1-205ENST00000503401 CYFIP1Q7L576 1253 aa18.76■□□□□ 0.59
SCLT1-205ENST00000503401 NECAB2Q7Z6G3 386 aa18.76■□□□□ 0.59
SCLT1-205ENST00000503401 PLA2G4DQ86XP0 818 aa18.76■□□□□ 0.59
SCLT1-205ENST00000503401 SENP6Q9GZR1 1112 aaPredicted RBP18.76■□□□□ 0.59
SCLT1-205ENST00000503401 KIF28PB7ZC32 967 aa18.75■□□□□ 0.59
SCLT1-205ENST00000503401 ASGR1P07306 291 aa18.75■□□□□ 0.59
SCLT1-205ENST00000503401 KCNA2P16389 499 aa18.75■□□□□ 0.59
SCLT1-205ENST00000503401 CST5P28325 142 aaPredicted RBP18.75■□□□□ 0.59
SCLT1-205ENST00000503401 CIITAP33076 1130 aa18.75■□□□□ 0.59
SCLT1-205ENST00000503401 USP11P51784 963 aa18.75■□□□□ 0.59
SCLT1-205ENST00000503401 NKX3-2P78367 333 aa18.75■□□□□ 0.59
SCLT1-205ENST00000503401 SP4Q02446 784 aa18.75■□□□□ 0.59
SCLT1-205ENST00000503401 LETM2Q2VYF4 491 aa18.75■□□□□ 0.59
SCLT1-205ENST00000503401 SPRYD3Q8NCJ5 442 aa18.75■□□□□ 0.59
SCLT1-205ENST00000503401 CDHR1Q96JP9 859 aa18.75■□□□□ 0.59
SCLT1-205ENST00000503401 C11orf49Q9H6J7 331 aa18.75■□□□□ 0.59
SCLT1-205ENST00000503401 MLXIPQ9HAP2 919 aa18.75■□□□□ 0.59
SCLT1-205ENST00000503401 H3BQV1 296 aa18.74■□□□□ 0.59
SCLT1-205ENST00000503401 COL6A1P12109 1028 aa18.74■□□□□ 0.59
SCLT1-205ENST00000503401 CPT1AP50416 773 aa18.74■□□□□ 0.59
SCLT1-205ENST00000503401 ACLYP53396 1101 aa18.74■□□□□ 0.59
SCLT1-205ENST00000503401 LAMC2Q13753 1193 aa18.74■□□□□ 0.59
SCLT1-205ENST00000503401 HSDL1Q3SXM5 330 aa18.74■□□□□ 0.59
SCLT1-205ENST00000503401 IFFO2Q5TF58 517 aa18.74■□□□□ 0.59
SCLT1-205ENST00000503401 LARP1BQ659C4 914 aaKnown RBP18.74■□□□□ 0.59
SCLT1-205ENST00000503401 CXCL17Q6UXB2 119 aa18.74■□□□□ 0.59
SCLT1-205ENST00000503401 NEK8Q86SG6 692 aa18.74■□□□□ 0.59
SCLT1-205ENST00000503401 LENG9Q96B70 501 aa18.74■□□□□ 0.59
SCLT1-205ENST00000503401 INTS4Q96HW7 963 aaKnown RBP18.74■□□□□ 0.59
SCLT1-205ENST00000503401 SPATA33Q96N06 139 aa18.74■□□□□ 0.59
SCLT1-205ENST00000503401 AGO4Q9HCK5 861 aaKnown RBP18.74■□□□□ 0.59
SCLT1-205ENST00000503401 A0A1W2PQ45 241 aaPredicted RBP18.74■□□□□ 0.59
SCLT1-205ENST00000503401 A0A1W2PQY0 241 aa18.74■□□□□ 0.59
SCLT1-205ENST00000503401 A6NJR5 290 aa18.74■□□□□ 0.59
SCLT1-205ENST00000503401 MMP3P08254 477 aa18.74■□□□□ 0.59
SCLT1-205ENST00000503401 CAPN2P17655 700 aa18.74■□□□□ 0.59
SCLT1-205ENST00000503401 ATN1P54259 1190 aaPredicted RBP18.74■□□□□ 0.59
SCLT1-205ENST00000503401 ITGB3BPQ13352 177 aaPredicted RBP18.74■□□□□ 0.59
SCLT1-205ENST00000503401 GNL2Q13823 731 aaKnown RBP18.74■□□□□ 0.59
SCLT1-205ENST00000503401 NEDD9Q14511 834 aa18.74■□□□□ 0.59
SCLT1-205ENST00000503401 PCSK9Q8NBP7 692 aaKnown RBP18.74■□□□□ 0.59
SCLT1-205ENST00000503401 GJA10Q969M2 543 aa18.74■□□□□ 0.59
SCLT1-205ENST00000503401 EMID1Q96A84 441 aaPredicted RBP18.74■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms